Potomida semirugata(拉马克,1819 年)的完整雌性有丝分裂基因组。

Pub Date : 2024-07-17 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2378964
Ana Matos, André Gomes-Dos-Santos, Ümit Kebapçı, Mustafa Emre Gürlek, Elsa Froufe, Manuel Lopes-Lima
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引用次数: 0

摘要

淡水贻贝在生态系统中发挥着重要的生态功能,如水过滤和能量循环。与海洋双壳贝类不同,淡水贻贝具有独特的特征,包括体内受精和亲代照料。由于气候变化和栖息地丧失等多种因素,一些淡水贻贝正面临着灭绝的高风险。Potomida semirugata(Lamarck,1819 年)是面临高灭绝风险的淡水贻贝物种之一,被列入《国际自然保护联盟红色名录》的濒危物种。在这里,我们首次展示了P. semirugata的F型有丝分裂基因组序列。该基因组是在 Illumina 高通量平台上对采集自土耳其 Tersakan 河的 P. semirugata 标本进行测序的。16,093 bp 的线粒体基因组序列包含 13 个蛋白质编码基因、22 个转移 RNA 和 2 个核糖体 RNA。系统进化分析结果表明,P. semirugata 与 Potomida littoralis 同属 Lamprotulini 支系。Potomida semirugata 是一个研究较少的物种,本文提供的基因组资源将有助于更好地了解其生物学特征。
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The complete female mitogenome of Potomida semirugata (Lamarck, 1819).

Freshwater mussels perform important ecological functions in ecosystems, such as water filtration and energy cycling. Unlike marine bivalves, freshwater mussels have unique characteristics including internal fertilization and parental care. Some freshwater mussels are facing a high risk of extinction due to several factors such as climate change and habitat loss. Potomida semirugata (Lamarck, 1819) is one of the freshwater mussel species with a high risk of extinction and listed as Endangered in the Red List of the International Union for Conservation of Nature. Here, we present the first F-type mitogenome sequence of P. semirugata. The genome was sequenced on an Illumina high-throughput platform from a P. semirugata specimen collected from the Tersakan River (Turkey). The 16,093 bp mitochondrial genome sequence contains 13 protein-coding genes, 22 transfer RNAs, and two ribosomal RNAs. Phylogenetic analysis placed P. semirugata in the Lamprotulini clade with Potomida littoralis, as expected. Potomida semirugata is a poorly studied species and the genomic resource provided here will contribute to a better understanding of its biological characterization.

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