通过体外和体内方法革新酸性乳酸球菌 BCB1H 的益生菌功能、生化活性、抗生素抗性和特异基因。

IF 1.8 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Zeitschrift Fur Naturforschung Section C-A Journal of Biosciences Pub Date : 2024-07-19 DOI:10.1515/znc-2024-0074
Gege Hu, Muhammad Naveed, Muhammad Aqib Shabbir, Abid Sarwar, Junaid Yousaf, Yang Zhennai, Tariq Aziz, Metab Alharbi, Abdulrahman Alshammari
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引用次数: 0

摘要

本研究介绍了对 Pediococcus acidilactici BCB1H 菌株进行的全面基因组学探索、生化表征以及抗生素耐药性和特殊基因的鉴定。本研究对其功能特性、基因组成、生物活性和其他重要参数进行了研究,重点是抗生素耐药性和特殊基因谱。研究结果揭示了抗生素耐药性和特殊基因的独特敏感性模式。BCB1H 具有良好的体外益生特性,在模拟人工胃肠液中存活良好,并表现出耐酸性和耐胆盐性。BCB1H 不产生溶血,对抗生素有一定的敏感性,是一种相对安全的 LAB 菌株。同时,它还具有良好的自凝特性和抗氧化活性。BCB1H 产生的 EPS 也具有一定的抗氧化活性和降血糖功能。此外,基因组研究还分析了其基因组,其 GC 含量为 42.4%,大小约为 192 万碱基对。基因组注释确定了 192 个子系统和 1,895 个基因,从而揭示了 BCB1H 的代谢途径和功能类别。与碳水化合物代谢、应激反应、致病性和氨基酸相关的特殊基因的鉴定突出了该菌株的多功能性和可能的用途。本研究强调了使用多个菌株研究遗传多样性和对预测基因进行实验验证的重要性,为今后的研究奠定了基础。研究结果为利用 P. acidilactici BCB1H 的遗传特征进行工业和医学应用提供了路线图,为食品技术和医学等行业的实际应用打开了大门。
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Revolutionizing the probiotic functionality, biochemical activity, antibiotic resistance and specialty genes of Pediococcus acidilactici BCB1H via in-vitro and in-silico approaches.

This study presents a comprehensive genomic exploration, biochemical characterization, and the identification of antibiotic resistance and specialty genes of Pediococcus acidilactici BCB1H strain. The functional characterization, genetic makeup, biological activities, and other considerable parameters have been investigated in this study with a prime focus on antibiotic resistance and specialty gene profiles. The results of this study revealed the unique susceptibility patterns for antibiotic resistance and specialty genes. BCB1H had good in vitro probiotic properties, which survived well in simulated artificial gastrointestinal fluid, and exhibited acid and bile salt resistance. BCB1H didn't produce hemolysis and had certain antibiotic sensitivity, making it a relatively safe LAB strain. Simultaneously, it had good self-coagulation characteristics and antioxidant activity. The EPS produced by BCB1H also had certain antioxidant activity and hypoglycemic function. Moreover, the genome with a 42.4 % GC content and a size of roughly 1.92 million base pairs was analyzed in the genomic investigations. The genome annotation identified 192 subsystems and 1,895 genes, offering light on the metabolic pathways and functional categories found in BCB1H. The identification of specialty genes linked to the metabolism of carbohydrates, stress response, pathogenicity, and amino acids highlighted the strain's versatility and possible uses. This study establishes the groundwork for future investigations by highlighting the significance of using multiple strains to investigate genetic diversity and experimental validation of predicted genes. The results provide a roadmap for utilizing P. acidilactici BCB1H's genetic traits for industrial and medical applications, opening the door to real-world uses in industries including food technology and medicine.

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来源期刊
CiteScore
4.10
自引率
5.00%
发文量
55
期刊介绍: A Journal of Biosciences: Zeitschrift für Naturforschung C (ZNC) is an international scientific journal and a community resource for the emerging field of natural and natural-like products. The journal publishes original research on the isolation (including structure elucidation), bio-chemical synthesis and bioactivities of natural products, their biochemistry, pharmacology, biotechnology, and their biological activity and innovative developed computational methods for predicting the structure and/or function of natural products. A Journal of Biosciences: Zeitschrift für Naturforschung C (ZNC) welcomes research papers in fields on the chemistry-biology boundary which address scientific ideas and approaches to generate and understand natural compounds on a molecular level and/or use them to stimulate and manipulate biological processes.
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