Triticum timonovum Heslot et Ferrary 叶绿体基因组的测序和注释

IF 0.6 4区生物学 Q4 GENETICS & HEREDITY Russian Journal of Genetics Pub Date : 2024-07-27 DOI:10.1134/s1022795424700455

A. R. Kuluev, R. T. Matniyazov, B. R. Kuluev, L. Yu. Privalov, A. V. Chemeris

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引用次数: 0

摘要

摘要首次对合成八倍体Triticum timonovum Heslot et Ferrary k-43065（法国）的叶绿体基因组进行了测序。质粒测序是在 Genolab M 测序仪（中国 GeneMind 公司）上进行的。基因组组装使用 NOVOwrap 程序进行。Timonovum 的叶绿体基因组大小为 136 158 bp。倒位重复区长度为 21 552 bp，SSC 区长度为 12 795 bp，LSC 长度为 80 257 bp。比较了 T. timonovum 和 GenBank 数据库中不同 T. timopheevii 的叶绿体基因组。在叶绿体基因组方面，T. timonovum与T. timopheevii（AB976560.1）较为接近，但在47891位存在一个插入物A。

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Sequencing and Annotation of the Chloroplast Genome of Triticum timonovum Heslot et Ferrary

Abstract—

The chloroplast genome of the synthetic octaploid Triticum timonovum Heslot et Ferrary k-43065 (France) was sequenced for the first time. Plastome sequencing was carried out on a Genolab M sequencer (GeneMind, China). The genome assembly was carried out using the NOVOwrap program. The size of the chloroplast genome of T. timonovum was 136 158 bp. The length of the inverted repeat region was 21 552 bp, that of the SSC region was 12 795 bp, and the LSC length was 80 257 bp. The chloroplast genomes of T. timonovum and different T. timopheevii accessions from the GenBank database were compared. As for the chloroplast genome, T. timonovum was closer to T. timopheevii (AB976560.1) but differed from it by the presence of one insert A at position 47891.

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来源期刊

Russian Journal of Genetics 生物-遗传学

CiteScore

1.00

自引率

33.30%

发文量

126

审稿时长

1 months

期刊介绍： Russian Journal of Genetics is a journal intended to make significant contribution to the development of genetics. The journal publishes reviews and experimental papers in the areas of theoretical and applied genetics. It presents fundamental research on genetic processes at molecular, cell, organism, and population levels, including problems of the conservation and rational management of genetic resources and the functional genomics, evolutionary genomics and medical genetics.