表观遗传在进化拯救中的作用

IF 1.8 4区 物理与天体物理 Q4 CHEMISTRY, PHYSICAL The European Physical Journal E Pub Date : 2024-07-27 DOI:10.1140/epje/s10189-024-00445-4
Osmar Freitas, Paulo R. A. Campos
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引用次数: 0

摘要

摘要 适应性进化使由于环境变化而濒临灭绝的种群得以保存的过程被称为进化拯救。决定这些种群命运的因素有很多,包括人口和遗传因素,如长期遗传变异、基因流动、新突变的可获得性等。尽管目前的文献对进化拯救进行了广泛的讨论,但还缺少关于外显性和适应性景观拓扑对衰退种群命运的作用的研究。在目前的研究中,我们旨在填补这一空白,研究表观遗传对种群灭绝概率的影响。我们给出了模拟结果,并推导出了分析近似值。与直觉相反的是,我们发现当外显率越高时,种群灭绝的可能性就越小。其原因有二:首先,较高的外显率会促进表型效应更显著的突变;另外,基因型-表型和表型-适配性之间的不一致性会使低外显率时的适配性景观变得更加崎岖不平,从而抑制了其某些优势。
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The role of epistasis in evolutionary rescue

The process by which adaptive evolution preserves a population threatened with extinction due to environmental changes is known as evolutionary rescue. Several factors determine the fate of those populations, including demography and genetic factors, such as standing genetic variation, gene flow, availability of de novo mutations, and so on. Despite the extensive debate about evolutionary rescue in the current literature, a study about the role of epistasis and the topography of the fitness landscape on the fate of dwindling populations is missing. In the current work, we aim to fill this gap and study the influence of epistasis on the probability of extinction of populations. We present simulation results, and analytical approximations are derived. Counterintuitively, we show that the likelihood of extinction is smaller when the degree of epistasis is higher. The reason underneath is twofold: first, higher epistasis can promote mutations of more significant phenotypic effects, but also, the incongruence between the maps genotype–phenotype and phenotype–fitness turns the fitness landscape at low epistasis more rugged, thus curbing some of its advantages.

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来源期刊
The European Physical Journal E
The European Physical Journal E CHEMISTRY, PHYSICAL-MATERIALS SCIENCE, MULTIDISCIPLINARY
CiteScore
2.60
自引率
5.60%
发文量
92
审稿时长
3 months
期刊介绍: EPJ E publishes papers describing advances in the understanding of physical aspects of Soft, Liquid and Living Systems. Soft matter is a generic term for a large group of condensed, often heterogeneous systems -- often also called complex fluids -- that display a large response to weak external perturbations and that possess properties governed by slow internal dynamics. Flowing matter refers to all systems that can actually flow, from simple to multiphase liquids, from foams to granular matter. Living matter concerns the new physics that emerges from novel insights into the properties and behaviours of living systems. Furthermore, it aims at developing new concepts and quantitative approaches for the study of biological phenomena. Approaches from soft matter physics and statistical physics play a key role in this research. The journal includes reports of experimental, computational and theoretical studies and appeals to the broad interdisciplinary communities including physics, chemistry, biology, mathematics and materials science.
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