咪喹莫特--一种免疫调节剂的结构表征、溶剂中的电子特性、Hirshfeld、拓扑学和生物学研究

IF 4.1 3区 化学 Q2 CHEMISTRY, PHYSICAL Journal of Photochemistry and Photobiology A-chemistry Pub Date : 2024-07-27 DOI:10.1016/j.jphotochem.2024.115917
{"title":"咪喹莫特--一种免疫调节剂的结构表征、溶剂中的电子特性、Hirshfeld、拓扑学和生物学研究","authors":"","doi":"10.1016/j.jphotochem.2024.115917","DOIUrl":null,"url":null,"abstract":"<div><p>Appling density functional theory together with basis set B3LYP/6-311G++(d,p), the organic compound Imiquimod was theoretically analyzed by spectroscopic and UV–Visible approaches and also structure optimization and contructural parameters have been done. Non-linear optics, Frontier Molecular orbitals, Molecular electrostatic potential (MEP) were computed using solvents inclusive of gas, water, chloroform, ethanol and acetone. Using TD-DFT with model IEFPCM, the transition spectra have been obtained. The electron interaction and reactive areas have been analyzed by NBO and Fukui methods. Using Multiwave function, the surface properties such as electron localization function, localized orbital locator, Electron density, TDOS, electrostatic potential and Non-covalent interaction have been carried out using solvents. Coulomb, dispersion and total energies were calculated, surface analysis and molecular interactions were carried out using Hirshfeld surface analysis. Using molecular docking, the appropriate docking sites have been identified.</p></div>","PeriodicalId":16782,"journal":{"name":"Journal of Photochemistry and Photobiology A-chemistry","volume":null,"pages":null},"PeriodicalIF":4.1000,"publicationDate":"2024-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Structural characterization, electronic properties in solvents, Hirshfeld, topological and biological investigation on Imiquimod – An immunomodulator agent\",\"authors\":\"\",\"doi\":\"10.1016/j.jphotochem.2024.115917\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Appling density functional theory together with basis set B3LYP/6-311G++(d,p), the organic compound Imiquimod was theoretically analyzed by spectroscopic and UV–Visible approaches and also structure optimization and contructural parameters have been done. Non-linear optics, Frontier Molecular orbitals, Molecular electrostatic potential (MEP) were computed using solvents inclusive of gas, water, chloroform, ethanol and acetone. Using TD-DFT with model IEFPCM, the transition spectra have been obtained. The electron interaction and reactive areas have been analyzed by NBO and Fukui methods. Using Multiwave function, the surface properties such as electron localization function, localized orbital locator, Electron density, TDOS, electrostatic potential and Non-covalent interaction have been carried out using solvents. Coulomb, dispersion and total energies were calculated, surface analysis and molecular interactions were carried out using Hirshfeld surface analysis. Using molecular docking, the appropriate docking sites have been identified.</p></div>\",\"PeriodicalId\":16782,\"journal\":{\"name\":\"Journal of Photochemistry and Photobiology A-chemistry\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.1000,\"publicationDate\":\"2024-07-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Photochemistry and Photobiology A-chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1010603024004611\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Photochemistry and Photobiology A-chemistry","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1010603024004611","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0

摘要

应用密度泛函理论和基集 B3LYP/6-311G++(d,p),通过光谱和紫外-可见光方法对有机化合物咪喹莫特进行了理论分析,并对其结构和结构参数进行了优化。使用气体、水、氯仿、乙醇和丙酮等溶剂计算了非线性光学、前沿分子轨道和分子静电位(MEP)。利用带有 IEFPCM 模型的 TD-DFT,获得了过渡光谱。采用 NBO 和 Fukui 方法分析了电子相互作用和反应面积。利用多波函数,使用溶剂分析了电子定位函数、定位轨道定位器、电子密度、TDOS、静电势和非共价相互作用等表面性质。计算了库仑能量、分散能量和总能量,并使用 Hirshfeld 表面分析法进行了表面分析和分子相互作用。通过分子对接,确定了适当的对接位点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Structural characterization, electronic properties in solvents, Hirshfeld, topological and biological investigation on Imiquimod – An immunomodulator agent

Appling density functional theory together with basis set B3LYP/6-311G++(d,p), the organic compound Imiquimod was theoretically analyzed by spectroscopic and UV–Visible approaches and also structure optimization and contructural parameters have been done. Non-linear optics, Frontier Molecular orbitals, Molecular electrostatic potential (MEP) were computed using solvents inclusive of gas, water, chloroform, ethanol and acetone. Using TD-DFT with model IEFPCM, the transition spectra have been obtained. The electron interaction and reactive areas have been analyzed by NBO and Fukui methods. Using Multiwave function, the surface properties such as electron localization function, localized orbital locator, Electron density, TDOS, electrostatic potential and Non-covalent interaction have been carried out using solvents. Coulomb, dispersion and total energies were calculated, surface analysis and molecular interactions were carried out using Hirshfeld surface analysis. Using molecular docking, the appropriate docking sites have been identified.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
7.90
自引率
7.00%
发文量
580
审稿时长
48 days
期刊介绍: JPPA publishes the results of fundamental studies on all aspects of chemical phenomena induced by interactions between light and molecules/matter of all kinds. All systems capable of being described at the molecular or integrated multimolecular level are appropriate for the journal. This includes all molecular chemical species as well as biomolecular, supramolecular, polymer and other macromolecular systems, as well as solid state photochemistry. In addition, the journal publishes studies of semiconductor and other photoactive organic and inorganic materials, photocatalysis (organic, inorganic, supramolecular and superconductor). The scope includes condensed and gas phase photochemistry, as well as synchrotron radiation chemistry. A broad range of processes and techniques in photochemistry are covered such as light induced energy, electron and proton transfer; nonlinear photochemical behavior; mechanistic investigation of photochemical reactions and identification of the products of photochemical reactions; quantum yield determinations and measurements of rate constants for primary and secondary photochemical processes; steady-state and time-resolved emission, ultrafast spectroscopic methods, single molecule spectroscopy, time resolved X-ray diffraction, luminescence microscopy, and scattering spectroscopy applied to photochemistry. Papers in emerging and applied areas such as luminescent sensors, electroluminescence, solar energy conversion, atmospheric photochemistry, environmental remediation, and related photocatalytic chemistry are also welcome.
期刊最新文献
Editorial Board Photoelectrodegradation and sensing of pentachlorophenol using In and Mn metalated porphyrins in the presence of TiO2 nanoparticles Three multifunctional difluoroboron fluorescent dyes with five member N-heterocyclic ring for mechanofluorochromic behaviors, the ink-free writing and latent fingerprints imaging The role of process parameters on photooxidative degradation of 2,4-D herbicide using TiO2 nanoparticles: Kinetic and mechanistic study Insight into solvation-regulated emission: Dissecting the switchable ESIPT/ESPT mechanisms in HNT molecule
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1