探索 mGluR5 的新型配体:设计、计算分析和蛋白质配体相互作用研究

IF 3.8 Q2 CHEMISTRY, PHYSICAL Chemical Physics Impact Pub Date : 2024-07-21 DOI:10.1016/j.chphi.2024.100691
Chandraprakash Gond , Nikhil Kumar , Vijay Kumar Singh , Anupama Datta , Anjani Kumar Tiwari
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引用次数: 0

摘要

变态谷氨酸受体(mGluRs)是由谷氨酸激活的 G 蛋白偶联受体。一系列 90 种新型化合物被评估为 mGluR5 受体拮抗剂。这些化合物是根据利平斯基的 "五选一 "规则,经过 ADMET 筛选后选出的,代表了从现有的有前景的配体中获得灵感的结构创新配体。利用 FlexX 程序,这些配体与参考化合物 SIB1757 一起与 mGluR5 进行了对接。对接模拟结果表明,以正交取代分子为特征的化合物 14 最有希望,其结合亲和力为 -47 kcal/mol,其次是化合物 8,为 -41 kcal/mol。与参考化合物相比,共有 31 个对接分子表现出更高的结合亲和力。随后进行的超过 100 ns 的分子动力学模拟证实了蛋白质配体复合物的稳定性,从而确定了所选化合物作为 mGluR5.G 负异构调节剂的功效。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Exploring novel ligands for mGluR5: Design, computational analysis, and protein-ligand interaction studies

Metabotropic glutamate receptors (mGluRs) are G-protein-coupled receptors activated by glutamate. A series of 90 novel compounds have been assessed as mGluR5 receptor antagonists. These compounds, selected post-ADMET filtering according to Lipinski's rule of five, represent structurally innovative ligands inspired by promising existing ones. Utilizing the FlexX program, the ligands were docked alongside the reference compound SIB1757 to mGluR5. Docking simulations unveiled compound 14, featuring an ortho-substituted moiety, as the most promising with a binding affinity of -47 kcal/mol, followed by compound 8 at -41 kcal/mol. A total of 31 docked molecules exhibited superior binding affinity compared to reference compounds. Subsequent molecular dynamics simulations over 100 ns confirmed the stability of protein-ligand complexes, establishing the efficacy of the selected compounds as negative allosteric modulators of mGluR5.G

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来源期刊
Chemical Physics Impact
Chemical Physics Impact Materials Science-Materials Science (miscellaneous)
CiteScore
2.60
自引率
0.00%
发文量
65
审稿时长
46 days
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