利用可解释的人工智能,基于 ML 的卵巢癌可靠诊断决策支持系统

Asif Newaz , Abdullah Taharat , Md Sakibul Islam , Khairum Islam , A.G.M. Fuad Hasan Akanda
{"title":"利用可解释的人工智能,基于 ML 的卵巢癌可靠诊断决策支持系统","authors":"Asif Newaz ,&nbsp;Abdullah Taharat ,&nbsp;Md Sakibul Islam ,&nbsp;Khairum Islam ,&nbsp;A.G.M. Fuad Hasan Akanda","doi":"10.1016/j.imu.2024.101553","DOIUrl":null,"url":null,"abstract":"<div><p>Ovarian cancer (OC) is one of the most prevalent types of cancer in women. Early and accurate diagnosis is crucial for the survival of the patients. However, the majority of women are diagnosed in advanced stages due to the lack of effective biomarkers and accurate screening tools. While previous studies sought a common biomarker, our study suggests different biomarkers for the premenopausal and postmenopausal populations. This can provide a new perspective in the search for novel predictors for the effective diagnosis of OC. Genetic algorithm has been utilized to identify the most significant biomarkers. The XGBoost classifier is then trained on the selected features and high ROC-AUC scores of 0.864 and 0.911 have been obtained for the premenopausal and postmenopausal populations, respectively. Lack of explainability is one major limitation of current AI systems. The stochastic nature of the ML algorithms raises concerns about the reliability of the system as it is difficult to interpret the reasons behind the decisions. To increase the trustworthiness and accountability of the diagnostic system as well as to provide transparency and explanations behind the predictions, explainable AI has been incorporated into the ML framework. SHAP is employed to quantify the contributions of the selected biomarkers and determine the most discriminative features. Merging SHAP with the ML models enables clinicians to investigate individual decisions made by the model and gain insights into the factors leading to that prediction. Thus, a hybrid decision support system has been established that can eliminate the bottlenecks caused by the black-box nature of the ML algorithms providing a safe and trustworthy AI tool. The diagnostic accuracy obtained from the proposed system outperforms the existing methods as well as the state-of-the-art ROMA algorithm by a substantial margin which signifies its potential to be an effective tool in the differential diagnosis of OC.</p></div>","PeriodicalId":13953,"journal":{"name":"Informatics in Medicine Unlocked","volume":"49 ","pages":"Article 101553"},"PeriodicalIF":0.0000,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2352914824001096/pdfft?md5=f84a6ad93580e45a6eaf14e1905d10d1&pid=1-s2.0-S2352914824001096-main.pdf","citationCount":"0","resultStr":"{\"title\":\"An ML-based decision support system for reliable diagnosis of ovarian cancer by leveraging explainable AI\",\"authors\":\"Asif Newaz ,&nbsp;Abdullah Taharat ,&nbsp;Md Sakibul Islam ,&nbsp;Khairum Islam ,&nbsp;A.G.M. Fuad Hasan Akanda\",\"doi\":\"10.1016/j.imu.2024.101553\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Ovarian cancer (OC) is one of the most prevalent types of cancer in women. Early and accurate diagnosis is crucial for the survival of the patients. However, the majority of women are diagnosed in advanced stages due to the lack of effective biomarkers and accurate screening tools. While previous studies sought a common biomarker, our study suggests different biomarkers for the premenopausal and postmenopausal populations. This can provide a new perspective in the search for novel predictors for the effective diagnosis of OC. Genetic algorithm has been utilized to identify the most significant biomarkers. The XGBoost classifier is then trained on the selected features and high ROC-AUC scores of 0.864 and 0.911 have been obtained for the premenopausal and postmenopausal populations, respectively. Lack of explainability is one major limitation of current AI systems. The stochastic nature of the ML algorithms raises concerns about the reliability of the system as it is difficult to interpret the reasons behind the decisions. To increase the trustworthiness and accountability of the diagnostic system as well as to provide transparency and explanations behind the predictions, explainable AI has been incorporated into the ML framework. SHAP is employed to quantify the contributions of the selected biomarkers and determine the most discriminative features. Merging SHAP with the ML models enables clinicians to investigate individual decisions made by the model and gain insights into the factors leading to that prediction. Thus, a hybrid decision support system has been established that can eliminate the bottlenecks caused by the black-box nature of the ML algorithms providing a safe and trustworthy AI tool. The diagnostic accuracy obtained from the proposed system outperforms the existing methods as well as the state-of-the-art ROMA algorithm by a substantial margin which signifies its potential to be an effective tool in the differential diagnosis of OC.</p></div>\",\"PeriodicalId\":13953,\"journal\":{\"name\":\"Informatics in Medicine Unlocked\",\"volume\":\"49 \",\"pages\":\"Article 101553\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S2352914824001096/pdfft?md5=f84a6ad93580e45a6eaf14e1905d10d1&pid=1-s2.0-S2352914824001096-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Informatics in Medicine Unlocked\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2352914824001096\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"Medicine\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Informatics in Medicine Unlocked","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2352914824001096","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Medicine","Score":null,"Total":0}
引用次数: 0

摘要

卵巢癌(OC)是女性最常见的癌症类型之一。早期准确诊断对患者的生存至关重要。然而,由于缺乏有效的生物标志物和准确的筛查工具,大多数妇女被诊断为晚期。以往的研究寻求一种共同的生物标志物,而我们的研究则提出了绝经前和绝经后人群的不同生物标志物。这为寻找有效诊断 OC 的新型预测指标提供了新的视角。遗传算法被用来识别最重要的生物标志物。然后根据所选特征对 XGBoost 分类器进行训练,绝经前和绝经后人群的 ROC-AUC 分别达到 0.864 和 0.911 的高分。缺乏可解释性是当前人工智能系统的一大局限。人工智能算法的随机性使人担心系统的可靠性,因为很难解释决策背后的原因。为了提高诊断系统的可信度和责任感,并提供预测背后的透明度和解释,可解释人工智能被纳入了 ML 框架。我们采用 SHAP 来量化所选生物标记物的贡献,并确定最具鉴别力的特征。将 SHAP 与 ML 模型合并后,临床医生就能对模型做出的个别决定进行调查,并深入了解导致该预测的因素。这样,一个混合决策支持系统就建立起来了,它可以消除因 ML 算法的黑箱性质而造成的瓶颈,提供安全可信的人工智能工具。拟议系统获得的诊断准确率大大超过了现有方法和最先进的 ROMA 算法,这表明它有可能成为鉴别诊断 OC 的有效工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
An ML-based decision support system for reliable diagnosis of ovarian cancer by leveraging explainable AI

Ovarian cancer (OC) is one of the most prevalent types of cancer in women. Early and accurate diagnosis is crucial for the survival of the patients. However, the majority of women are diagnosed in advanced stages due to the lack of effective biomarkers and accurate screening tools. While previous studies sought a common biomarker, our study suggests different biomarkers for the premenopausal and postmenopausal populations. This can provide a new perspective in the search for novel predictors for the effective diagnosis of OC. Genetic algorithm has been utilized to identify the most significant biomarkers. The XGBoost classifier is then trained on the selected features and high ROC-AUC scores of 0.864 and 0.911 have been obtained for the premenopausal and postmenopausal populations, respectively. Lack of explainability is one major limitation of current AI systems. The stochastic nature of the ML algorithms raises concerns about the reliability of the system as it is difficult to interpret the reasons behind the decisions. To increase the trustworthiness and accountability of the diagnostic system as well as to provide transparency and explanations behind the predictions, explainable AI has been incorporated into the ML framework. SHAP is employed to quantify the contributions of the selected biomarkers and determine the most discriminative features. Merging SHAP with the ML models enables clinicians to investigate individual decisions made by the model and gain insights into the factors leading to that prediction. Thus, a hybrid decision support system has been established that can eliminate the bottlenecks caused by the black-box nature of the ML algorithms providing a safe and trustworthy AI tool. The diagnostic accuracy obtained from the proposed system outperforms the existing methods as well as the state-of-the-art ROMA algorithm by a substantial margin which signifies its potential to be an effective tool in the differential diagnosis of OC.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Informatics in Medicine Unlocked
Informatics in Medicine Unlocked Medicine-Health Informatics
CiteScore
9.50
自引率
0.00%
发文量
282
审稿时长
39 days
期刊介绍: Informatics in Medicine Unlocked (IMU) is an international gold open access journal covering a broad spectrum of topics within medical informatics, including (but not limited to) papers focusing on imaging, pathology, teledermatology, public health, ophthalmological, nursing and translational medicine informatics. The full papers that are published in the journal are accessible to all who visit the website.
期刊最新文献
Usability and accessibility in mHealth stroke apps: An empirical assessment Spatiotemporal chest wall movement analysis using depth sensor imaging for detecting respiratory asynchrony Regression and classification of Windkessel parameters from non-invasive cardiovascular quantities using a fully connected neural network Patient2Trial: From patient to participant in clinical trials using large language models Structural modification of Naproxen; physicochemical, spectral, medicinal, and pharmacological evaluation
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1