食用菌 Singerocybe alboinfundibuliformis(Clitocybaceae,姬松茸科)的完整线粒体基因组。

Pub Date : 2024-07-31 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2385608
Nuo Xu, Shu Zhang, Yong-Jie Zhang
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引用次数: 0

摘要

Singerocybe alboinfundibuliformis (Seok et al.) Yang, Qin & Takah 2014 是一种食用菌,分布于多个东亚或东南亚国家。在此,我们基于 Illumina 测序数据报告了 S. alboinfundibuliformis 的线粒体基因组。线粒体基因组总长度为 64,279 bp,GC 含量为 29.0%。它包含 14 个典型的蛋白质编码基因、27 个 tRNA 基因、2 个 rRNA 基因和 13 个基因间 ORF。这些基因大部分(56 个中的 39 个)在正向链上转录,少数(56 个中的 17 个)在反向链上转录。在这些基因中,只有 rnl 基因有内含子,其他基因都没有内含子。基于线粒体氨基酸序列的系统进化分析支持 S. alboinfundibuliformis 在壳斗科的系统进化位置,与 Lepista sordida (Schumach.) Singer 1951 相近。这项研究为今后研究壳斗科真菌的进化提供了一个跳板。
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Complete mitochondrial genome of the edible mushroom Singerocybe alboinfundibuliformis (Clitocybaceae, Agaricales).

Singerocybe alboinfundibuliformis (Seok et al.) Yang, Qin & Takah 2014 is an edible mushroom distributed in several East or Southeast Asian countries. Herein, we report the mitochondrial genome of S. alboinfundibuliformis based on Illumina sequencing data. The overall length of the mitochondrial genome is 64,279 bp, with a GC content of 29.0%. It contains 14 typical protein-coding genes, 27 tRNA genes, two rRNA genes, and 13 intergenic ORFs. Most of these genes (39 out of 56) are transcribed at the forward strand, and few (17 out of 56) are transcribed at the reverse strand. Among these genes, only the rnl gene is invaded by an intron, and all other genes are intron-free. Phylogenetic analysis based on mitochondrial amino acid sequences supports the phylogenetic position of S. alboinfundibuliformis in Clitocybaceae, being close to Lepista sordida (Schumach.) Singer 1951. This study serves as a springboard for future investigation on fungal evolution in Clitocybaceae.

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