揭示 MYB 转录因子在非生物胁迫响应中的作用:Eugenia uniflora L.的综合方法

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2024-08-03 DOI:10.1007/s11105-024-01489-8
João Pedro Carmo Filgueiras, Thiago Dias da Silveira, Franceli Rodrigues Kulcheski, Andreia Carina Turchetto-Zolet
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引用次数: 0

摘要

MYB 转录因子(TF)在调节基因表达和协调植物对非生物和生物胁迫的反应方面发挥着至关重要的作用。研究表明,MYBs 参与了陆生植物的适应过程。然而,人们对来自不同环境的本地物种中的这些蛋白质知之甚少。Eugenia uniflora(桃金娘科)广泛分布于大西洋林区(AFD)的不同环境中。在这项工作中,我们采用一种涉及基因组、转录组和系统发生学分析的综合方法,鉴定了 E. uniflora 中的 147 个 MYB 基因。通过系统发生学方法,包括来自单花桉树、大桉树、拟南芥、番茄、大麦、葡萄和Medicago truncatula的MYB,我们将EunMYB分为39个亚科。RNA-seq数据分析揭示了MYB基因在一枝黄花和桉树胁迫条件下的表达模式。我们发现 50 个 EunMYB 基因在单叶桉干旱胁迫下有差异表达(DE)。在桉树中,11个基因在冷胁迫下有差异表达,25个基因在热胁迫下有差异表达。综合表达数据、系统发育关系以及文献中的现有数据,我们强调了一枝黄花中潜在的 MYBs,这些 MYBs 可能具有抗非生物性胁迫的作用,使其能够适应不同的环境条件。
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Unraveling the Role of MYB Transcription Factors in Abiotic Stress Responses: An Integrative Approach in Eugenia uniflora L.

MYB transcription factors (TF) play crucial roles in regulating gene expression and orchestrating responses to abiotic and biotic stresses in plants. MYBs were demonstrated to be involved in land plant adaptation. However, little is known about these proteins in native species from heterogeneous environments. Eugenia uniflora (Myrtaceae) is widely distributed in diverse environments within the Atlantic Forest Domain (AFD). In this work, we identified 147 MYB genes in E. uniflora using an integrative approach involving the genome, transcriptome, and phylogenetics analyses. A phylogenetic approach including MYBs from E. uniflora, Eucalyptus grandis, Arabidopsis thaliana, Solanum lycopersicum, Oryza sativa, Vitis vinifera, and Medicago truncatula allowed us to classify the EunMYB in 39 subfamilies already described. The RNA-seq data analysis unveiled the expression patterns of MYB genes under stress conditions in E. uniflora and Eucalyptus grandis. We found 50 EunMYB genes differentially expressed (DE) in E. uniflora under drought stress. In E. grandis, 11 genes were found to be DE under cold and 25 under heat stress. Integrating the expression data, phylogenetic relationships, and the available data from the literature, we highlight the potential MYBs of E. uniflora that may be acting in resistance to abiotic stress, enabling adaptation to diverse environmental conditions.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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