João Pedro Carmo Filgueiras, Thiago Dias da Silveira, Franceli Rodrigues Kulcheski, Andreia Carina Turchetto-Zolet
{"title":"揭示 MYB 转录因子在非生物胁迫响应中的作用:Eugenia uniflora L.的综合方法","authors":"João Pedro Carmo Filgueiras, Thiago Dias da Silveira, Franceli Rodrigues Kulcheski, Andreia Carina Turchetto-Zolet","doi":"10.1007/s11105-024-01489-8","DOIUrl":null,"url":null,"abstract":"<p>MYB transcription factors (TF) play crucial roles in regulating gene expression and orchestrating responses to abiotic and biotic stresses in plants. MYBs were demonstrated to be involved in land plant adaptation. However, little is known about these proteins in native species from heterogeneous environments. <i>Eugenia uniflora</i> (Myrtaceae) is widely distributed in diverse environments within the Atlantic Forest Domain (AFD). In this work, we identified 147 MYB genes in <i>E. uniflora</i> using an integrative approach involving the genome, transcriptome, and phylogenetics analyses. A phylogenetic approach including MYBs from <i>E. uniflora, Eucalyptus grandis</i>, <i>Arabidopsis thaliana</i>, <i>Solanum lycopersicum</i>, <i>Oryza sativa</i>, <i>Vitis vinifera,</i> and <i>Medicago truncatula</i> allowed us to classify the EunMYB in 39 subfamilies already described. The RNA-seq data analysis unveiled the expression patterns of MYB genes under stress conditions in <i>E. uniflora</i> and <i>Eucalyptus grandis</i>. We found 50 EunMYB genes differentially expressed (DE) in <i>E. uniflora</i> under drought stress. In <i>E. grandis</i>, 11 genes were found to be DE under cold and 25 under heat stress. Integrating the expression data, phylogenetic relationships, and the available data from the literature, we highlight the potential MYBs of <i>E. uniflora</i> that may be acting in resistance to abiotic stress, enabling adaptation to diverse environmental conditions.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2024-08-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Unraveling the Role of MYB Transcription Factors in Abiotic Stress Responses: An Integrative Approach in Eugenia uniflora L.\",\"authors\":\"João Pedro Carmo Filgueiras, Thiago Dias da Silveira, Franceli Rodrigues Kulcheski, Andreia Carina Turchetto-Zolet\",\"doi\":\"10.1007/s11105-024-01489-8\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>MYB transcription factors (TF) play crucial roles in regulating gene expression and orchestrating responses to abiotic and biotic stresses in plants. MYBs were demonstrated to be involved in land plant adaptation. However, little is known about these proteins in native species from heterogeneous environments. <i>Eugenia uniflora</i> (Myrtaceae) is widely distributed in diverse environments within the Atlantic Forest Domain (AFD). In this work, we identified 147 MYB genes in <i>E. uniflora</i> using an integrative approach involving the genome, transcriptome, and phylogenetics analyses. A phylogenetic approach including MYBs from <i>E. uniflora, Eucalyptus grandis</i>, <i>Arabidopsis thaliana</i>, <i>Solanum lycopersicum</i>, <i>Oryza sativa</i>, <i>Vitis vinifera,</i> and <i>Medicago truncatula</i> allowed us to classify the EunMYB in 39 subfamilies already described. The RNA-seq data analysis unveiled the expression patterns of MYB genes under stress conditions in <i>E. uniflora</i> and <i>Eucalyptus grandis</i>. We found 50 EunMYB genes differentially expressed (DE) in <i>E. uniflora</i> under drought stress. In <i>E. grandis</i>, 11 genes were found to be DE under cold and 25 under heat stress. Integrating the expression data, phylogenetic relationships, and the available data from the literature, we highlight the potential MYBs of <i>E. uniflora</i> that may be acting in resistance to abiotic stress, enabling adaptation to diverse environmental conditions.</p>\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2024-08-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s11105-024-01489-8\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s11105-024-01489-8","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Unraveling the Role of MYB Transcription Factors in Abiotic Stress Responses: An Integrative Approach in Eugenia uniflora L.
MYB transcription factors (TF) play crucial roles in regulating gene expression and orchestrating responses to abiotic and biotic stresses in plants. MYBs were demonstrated to be involved in land plant adaptation. However, little is known about these proteins in native species from heterogeneous environments. Eugenia uniflora (Myrtaceae) is widely distributed in diverse environments within the Atlantic Forest Domain (AFD). In this work, we identified 147 MYB genes in E. uniflora using an integrative approach involving the genome, transcriptome, and phylogenetics analyses. A phylogenetic approach including MYBs from E. uniflora, Eucalyptus grandis, Arabidopsis thaliana, Solanum lycopersicum, Oryza sativa, Vitis vinifera, and Medicago truncatula allowed us to classify the EunMYB in 39 subfamilies already described. The RNA-seq data analysis unveiled the expression patterns of MYB genes under stress conditions in E. uniflora and Eucalyptus grandis. We found 50 EunMYB genes differentially expressed (DE) in E. uniflora under drought stress. In E. grandis, 11 genes were found to be DE under cold and 25 under heat stress. Integrating the expression data, phylogenetic relationships, and the available data from the literature, we highlight the potential MYBs of E. uniflora that may be acting in resistance to abiotic stress, enabling adaptation to diverse environmental conditions.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.