药物基因组处方指南:它们总是有用吗?

IF 6.3 2区 医学 Q1 PHARMACOLOGY & PHARMACY Clinical Pharmacology & Therapeutics Pub Date : 2024-08-05 DOI:10.1002/cpt.3403
Magnus Ingelman-Sundberg
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Many rare diseases are caused by mutations in regulatory gene regions, and recent evidence shows that a significant portion of important SNP-dependent regulation of clinically important CYPs is located within a 1 Mb distance from the gene. This indicates that much more information is required before we can enhance the clinical applicability of pharmacogenomic predictions.</p><p>In oncology, our knowledge of clinically meaningful pharmacogenomic applications for predicting drug response is more advanced. However, in other areas such as cardiovascular disease, the gene–drug pair clopidogrel-CYP2C19 is one of the few with some, albeit limited, clinical utilities.<span><sup>1, 2</sup></span>\n </p><p>In the study by Duarte et al.,<span><sup>3</sup></span> the authors conducted a thorough and high-quality literature investigation of the relationship between beta-blocker exposure and response in relation to the distribution of genetic variants of <i>CYP2D6, ADRB1, ADRB2, ADRA2C, GRK4</i>, and <i>GRK5</i>. Their survey found that after treatment with metoprolol, a decrease in heart rate by 3–8 beats per minute more in CYP2D6-PMs than in CYP2D6-NMs appeared to occur, whereas no significant CYP2D6-related effects were observed after treatment with other beta-blockers such as carvedilol, propranolol, labetalol, and nebivolol. On this basis, the authors provide an extensive guideline with therapeutic recommendations regarding the genetically predicted CYP2D6 metabolizer status and metoprolol therapy.</p><p>This raises questions about the cost–benefit impact of pharmacogenomic guidelines on clinical practice and metoprolol treatment in particular. The value of pharmacogenomics lies in identifying relevant gene–drug pairs where genetic variants cause clinically significant interindividual differences in drug response and side effects. When these pairs are clinically applicable and beneficial for patients, regulatory guidelines are essential to assist healthcare providers. However, in the case of beta-blocker action, such relationships are virtually absent,<span><sup>4-6</sup></span> making regulatory guidelines of less importance. The observed effects on heart rate (a reduction of 3–8 beats per minute) do not justify preemptive genetic testing. Consequently, in general guideline publications would only be produced when the accumulated evidence in the literature is sufficiently relevant to clinical practice and includes precise recommendations that need to be implemented.</p><p>The dissemination of guidelines without significant clinical applications may in fact cause less attention of the clinicians for using pharmacogenomics in health care. Healthcare providers might consider such guidelines as an administrative burden, which would diminish their interest in pharmacogenomic information in other therapeutic areas. It is therefore necessary to adapt the content of the guidelines to the clinical situation and to focus only on what is highly relevant for use in the clinics.</p><p>Pharmacogenomic recommendations are included in the product descriptions (e.g., drug labels, or summary of product characteristics (SmPCs). These recommendations are made by regulatory authorities such as the US Food and Drug Administration (FDA) and the European Medicines Agency (EMA). In addition, academic organizations such as the Clinical Pharmacogenetics Implementation Consortium (CPIC) and the Dutch Pharmacogenetics Working Group (DPWG) provide guidelines of very high quality based on a lot of effort and knowledge among the experts involved for the use of drugs affected by genetic variants. In a comparison published in 2020 of the pharmacogenomic guidelines of the FDA and various European authorities, including the EMA, as well as the University ter Beoordeling van Geneesmiddelen Medicines Evaluation Board (CBG-MEB) and the Federal Institute for Drugs and Medical Devices (FIDMD) for drugs authorized before the establishment of the EMA in 1995 (collectively referred to as EMA/FM), we found notable discrepancies.<span><sup>7</sup></span> Similar heterogeneities in guideline data have also been published by Koutsilieri et al.<span><sup>8</sup></span>\n </p><p>We examined the pharmacogenomic labelling information on 505 different drugs provided by the CPIC, DPWG, FDA, and EMA/FM.<span><sup>6</sup></span> Of the 54 drugs with actionable gene–drug interactions according to CPIC and DPWG guidelines, only 50% of the corresponding SmPCs or drug labelling contained actionable pharmacogenomic information. Concordant FDA, EMA/FM, CPIC, and DPWG recommendations were found for only 10 (18%) of these 54 drugs. In addition, we examined 450 additional drugs for which there are no CPIC or DPWG recommendations and identified 126 with actionable genetics labelling according to the FDA and/or EMA/FM. For these 126 drugs and the 54 original drugs, the agreement between the FDA and EMA/FM for usable pharmacogenomic labelling was only 54%.</p><p>These discrepancies weaken the clinical importance of pharmacogenomic counseling. This is mainly because the scientific and clinical basis for many of the studies published is weak. These problems could be related to (i) underpowered studies, (ii) irrelevant selection of drug-gene pairs studied, (iii) open-label clinical trials causing significant placebo effects, (iv) heterogeneous disease classification, and (v) insufficient number of studies. As a result, many of the conclusions raised are not reproducible. In addition, many meta-analyses in this area are not homogeneous enough, for example, in terms of (i) drug concentrations, (ii) drug selection, (iii) timing of treatment, and (iv) initial pathophysiological definition (cf. ref. [<span>9</span>]). It is clear that more meaningful and stratified clinical trials should lead to a greater consensus between authorities, which would significantly improve the implementation of pharmacogenomic drug labelling in clinical practice.</p><p>According to my opinion, predictive pharmacogenomics should only be used if the gene–drug pair is well defined and the effects of gene variation at therapeutic concentrations are known to be clinically relevant. In this regard, the FDA has an interesting website<span><sup>10</sup></span> where gene–drug pairs with pharmacogenetic associations related to (i) therapeutic management recommendations, (ii) effects on safety or response, and (iii) effects on pharmacokinetic properties are listed. These pharmacogenomic associations provided by the FDA relate to gene variants of enzymes that metabolize drugs, to gene transporters, and to gene variants that have been associated with a predisposition to certain adverse events. Interestingly, 70% of the 124 pharmacogenomic biomarkers in Group 1) are related to genetic variations only in the <i>CYP2C9, CYP2C19</i>, or <i>CYP2D6</i> genes and 63% of the biomarkers are related to the CNS or oncology therapeutic areas and only propafenone and warfarin to the cardiovascular area. The FDA-approved metoprolol label does not contain any recommendations on pharmacogenomics.<span><sup>11</sup></span>\n </p><p>For scientists in the field of pharmacogenomics, it is obvious that the use of pharmacogenomic information in routine clinical practice is underdeveloped or underutilized in most European and American countries. Clear, concise guidelines aimed more at clinicians in routine care would improve implementation in the future. In this context, it is important to limit these guidelines to cases where the genetic aspect is indeed substantial compared with other factors influencing interindividual variability in drug response and adverse events are used, that is, to focus only on relevant genetic variants causing a PM or a UM phenotype (see <b>Figure</b> \n1\n).</p><p>Many of the pharmacogenomic guidelines that have been produced are very extensive and run to many pages. They are mainly aimed at professionals in the field, many of them in the biotech industry as stakeholders in the field. However, as mentioned, there is a lack of guidelines with a purely clinical profile covering the most important parts of pharmacogenomics in different therapeutic areas. It can be argued that producing guidelines that require a huge amount of work and focus on drug therapies with limited or no clinical relevance would be a waste of time. 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This indicates that much more information is required before we can enhance the clinical applicability of pharmacogenomic predictions.</p><p>In oncology, our knowledge of clinically meaningful pharmacogenomic applications for predicting drug response is more advanced. However, in other areas such as cardiovascular disease, the gene–drug pair clopidogrel-CYP2C19 is one of the few with some, albeit limited, clinical utilities.<span><sup>1, 2</sup></span>\\n </p><p>In the study by Duarte et al.,<span><sup>3</sup></span> the authors conducted a thorough and high-quality literature investigation of the relationship between beta-blocker exposure and response in relation to the distribution of genetic variants of <i>CYP2D6, ADRB1, ADRB2, ADRA2C, GRK4</i>, and <i>GRK5</i>. 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However, in the case of beta-blocker action, such relationships are virtually absent,<span><sup>4-6</sup></span> making regulatory guidelines of less importance. The observed effects on heart rate (a reduction of 3–8 beats per minute) do not justify preemptive genetic testing. Consequently, in general guideline publications would only be produced when the accumulated evidence in the literature is sufficiently relevant to clinical practice and includes precise recommendations that need to be implemented.</p><p>The dissemination of guidelines without significant clinical applications may in fact cause less attention of the clinicians for using pharmacogenomics in health care. Healthcare providers might consider such guidelines as an administrative burden, which would diminish their interest in pharmacogenomic information in other therapeutic areas. It is therefore necessary to adapt the content of the guidelines to the clinical situation and to focus only on what is highly relevant for use in the clinics.</p><p>Pharmacogenomic recommendations are included in the product descriptions (e.g., drug labels, or summary of product characteristics (SmPCs). These recommendations are made by regulatory authorities such as the US Food and Drug Administration (FDA) and the European Medicines Agency (EMA). In addition, academic organizations such as the Clinical Pharmacogenetics Implementation Consortium (CPIC) and the Dutch Pharmacogenetics Working Group (DPWG) provide guidelines of very high quality based on a lot of effort and knowledge among the experts involved for the use of drugs affected by genetic variants. In a comparison published in 2020 of the pharmacogenomic guidelines of the FDA and various European authorities, including the EMA, as well as the University ter Beoordeling van Geneesmiddelen Medicines Evaluation Board (CBG-MEB) and the Federal Institute for Drugs and Medical Devices (FIDMD) for drugs authorized before the establishment of the EMA in 1995 (collectively referred to as EMA/FM), we found notable discrepancies.<span><sup>7</sup></span> Similar heterogeneities in guideline data have also been published by Koutsilieri et al.<span><sup>8</sup></span>\\n </p><p>We examined the pharmacogenomic labelling information on 505 different drugs provided by the CPIC, DPWG, FDA, and EMA/FM.<span><sup>6</sup></span> Of the 54 drugs with actionable gene–drug interactions according to CPIC and DPWG guidelines, only 50% of the corresponding SmPCs or drug labelling contained actionable pharmacogenomic information. Concordant FDA, EMA/FM, CPIC, and DPWG recommendations were found for only 10 (18%) of these 54 drugs. In addition, we examined 450 additional drugs for which there are no CPIC or DPWG recommendations and identified 126 with actionable genetics labelling according to the FDA and/or EMA/FM. For these 126 drugs and the 54 original drugs, the agreement between the FDA and EMA/FM for usable pharmacogenomic labelling was only 54%.</p><p>These discrepancies weaken the clinical importance of pharmacogenomic counseling. This is mainly because the scientific and clinical basis for many of the studies published is weak. These problems could be related to (i) underpowered studies, (ii) irrelevant selection of drug-gene pairs studied, (iii) open-label clinical trials causing significant placebo effects, (iv) heterogeneous disease classification, and (v) insufficient number of studies. As a result, many of the conclusions raised are not reproducible. 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引用次数: 0

摘要

6 根据 CPIC 和 DPWG 指南,在 54 种存在可操作的基因-药物相互作用的药物中,只有 50% 的相应 SmPCs 或药物标签包含可操作的药物基因组学信息。在这 54 种药物中,只有 10 种(18%)的 FDA、EMA/FM、CPIC 和 DPWG 建议是一致的。此外,我们还检查了另外 450 种没有 CPIC 或 DPWG 建议的药物,根据 FDA 和/或 EMA/FM 的规定,确定了 126 种药物的遗传学标签具有可操作性。对于这 126 种药物和 54 种原始药物,FDA 和 EMA/FM 在可用药物基因组标签方面的一致率仅为 54%。这些差异削弱了药物基因组咨询的临床重要性,主要原因是许多已发表研究的科学和临床基础薄弱。这些问题可能与以下因素有关:(i) 研究动力不足;(ii) 所研究的药物基因对选择不相关;(iii) 开放标签临床试验导致明显的安慰剂效应;(iv) 疾病分类不统一;(v) 研究数量不足。因此,提出的许多结论都无法重复。此外,该领域的许多荟萃分析也不够均匀,例如在(i) 药物浓度、(ii) 药物选择、(iii) 治疗时机和(iv) 最初的病理生理学定义方面(参见参考文献 [9])。显然,更多有意义的分层临床试验应能促使权威机构之间达成更多共识,这将极大地改善药物基因组学药物标签在临床实践中的实施。在这方面,美国食品及药物管理局(FDA)有一个有趣的网站10 ,其中列出了与药物遗传学相关的基因-药物配对:(i) 治疗管理建议,(ii) 对安全性或反应的影响,(iii) 对药物动力学特性的影响。FDA 提供的这些药物基因组关联涉及药物代谢酶的基因变异、基因转运体以及与某些不良事件易感性相关的基因变异。有趣的是,在第 1 组的 124 个药物基因组生物标志物中,有 70% 只与 CYP2C9、CYP2C19 或 CYP2D6 基因的遗传变异有关,63% 的生物标志物与中枢神经系统或肿瘤治疗领域有关,只有普罗帕酮和华法林与心血管领域有关。11 对于药物基因组学领域的科学家来说,在大多数欧美国家,药物基因组学信息在常规临床实践中的应用显然还不够成熟或利用不足。更多针对临床医生常规护理的清晰、简明指南将改善未来的实施情况。在这种情况下,重要的是要将这些指南局限于与影响药物反应和不良事件个体间变异性的其他因素相比,遗传方面确实具有重大影响的情况,即只关注导致 PM 或 UM 表型的相关遗传变异(见图 1)。这些指南主要针对该领域的专业人士,其中许多人是该领域的利益相关者--生物技术行业的专业人士。然而,如前所述,目前还缺乏纯粹以临床为背景、涵盖不同治疗领域药物基因组学最重要部分的指南。可以说,制定需要大量工作且侧重于临床相关性有限或没有临床相关性的药物疗法的指南是在浪费时间。然而,未来与不同治疗领域的医生密切合作制定并定期更新的有针对性的指南将有利于药物基因组学在医疗保健领域的应用,并带来更具成本效益和更个体化的药物治疗。
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Pharmacogenomic Prescribing Guidelines: Are They Always Useful?

An extensive review of the literature exploring the relationship between beta-blocker response and genetic variants associated with six polymorphic genes, culminating in a comprehensive guideline exceeding 130 pages for the clinical use of beta-blockers, is published in this issue of CPT. However, the authors found no genetically related significant effects warranting clinical guidance. This commentary questions the necessity of pharmacogenomic guidelines in such instances and advocates for shorter targeted easily understandable guidelines focused on phenotypes with clear clinical relevance useful in various healthcare settings.

Pharmacogenomics is still largely in its infancy. Currently, we possess only about 30–40% understanding of the genetic inheritance basis relevant to pharmacogenomics. Many rare diseases are caused by mutations in regulatory gene regions, and recent evidence shows that a significant portion of important SNP-dependent regulation of clinically important CYPs is located within a 1 Mb distance from the gene. This indicates that much more information is required before we can enhance the clinical applicability of pharmacogenomic predictions.

In oncology, our knowledge of clinically meaningful pharmacogenomic applications for predicting drug response is more advanced. However, in other areas such as cardiovascular disease, the gene–drug pair clopidogrel-CYP2C19 is one of the few with some, albeit limited, clinical utilities.1, 2

In the study by Duarte et al.,3 the authors conducted a thorough and high-quality literature investigation of the relationship between beta-blocker exposure and response in relation to the distribution of genetic variants of CYP2D6, ADRB1, ADRB2, ADRA2C, GRK4, and GRK5. Their survey found that after treatment with metoprolol, a decrease in heart rate by 3–8 beats per minute more in CYP2D6-PMs than in CYP2D6-NMs appeared to occur, whereas no significant CYP2D6-related effects were observed after treatment with other beta-blockers such as carvedilol, propranolol, labetalol, and nebivolol. On this basis, the authors provide an extensive guideline with therapeutic recommendations regarding the genetically predicted CYP2D6 metabolizer status and metoprolol therapy.

This raises questions about the cost–benefit impact of pharmacogenomic guidelines on clinical practice and metoprolol treatment in particular. The value of pharmacogenomics lies in identifying relevant gene–drug pairs where genetic variants cause clinically significant interindividual differences in drug response and side effects. When these pairs are clinically applicable and beneficial for patients, regulatory guidelines are essential to assist healthcare providers. However, in the case of beta-blocker action, such relationships are virtually absent,4-6 making regulatory guidelines of less importance. The observed effects on heart rate (a reduction of 3–8 beats per minute) do not justify preemptive genetic testing. Consequently, in general guideline publications would only be produced when the accumulated evidence in the literature is sufficiently relevant to clinical practice and includes precise recommendations that need to be implemented.

The dissemination of guidelines without significant clinical applications may in fact cause less attention of the clinicians for using pharmacogenomics in health care. Healthcare providers might consider such guidelines as an administrative burden, which would diminish their interest in pharmacogenomic information in other therapeutic areas. It is therefore necessary to adapt the content of the guidelines to the clinical situation and to focus only on what is highly relevant for use in the clinics.

Pharmacogenomic recommendations are included in the product descriptions (e.g., drug labels, or summary of product characteristics (SmPCs). These recommendations are made by regulatory authorities such as the US Food and Drug Administration (FDA) and the European Medicines Agency (EMA). In addition, academic organizations such as the Clinical Pharmacogenetics Implementation Consortium (CPIC) and the Dutch Pharmacogenetics Working Group (DPWG) provide guidelines of very high quality based on a lot of effort and knowledge among the experts involved for the use of drugs affected by genetic variants. In a comparison published in 2020 of the pharmacogenomic guidelines of the FDA and various European authorities, including the EMA, as well as the University ter Beoordeling van Geneesmiddelen Medicines Evaluation Board (CBG-MEB) and the Federal Institute for Drugs and Medical Devices (FIDMD) for drugs authorized before the establishment of the EMA in 1995 (collectively referred to as EMA/FM), we found notable discrepancies.7 Similar heterogeneities in guideline data have also been published by Koutsilieri et al.8

We examined the pharmacogenomic labelling information on 505 different drugs provided by the CPIC, DPWG, FDA, and EMA/FM.6 Of the 54 drugs with actionable gene–drug interactions according to CPIC and DPWG guidelines, only 50% of the corresponding SmPCs or drug labelling contained actionable pharmacogenomic information. Concordant FDA, EMA/FM, CPIC, and DPWG recommendations were found for only 10 (18%) of these 54 drugs. In addition, we examined 450 additional drugs for which there are no CPIC or DPWG recommendations and identified 126 with actionable genetics labelling according to the FDA and/or EMA/FM. For these 126 drugs and the 54 original drugs, the agreement between the FDA and EMA/FM for usable pharmacogenomic labelling was only 54%.

These discrepancies weaken the clinical importance of pharmacogenomic counseling. This is mainly because the scientific and clinical basis for many of the studies published is weak. These problems could be related to (i) underpowered studies, (ii) irrelevant selection of drug-gene pairs studied, (iii) open-label clinical trials causing significant placebo effects, (iv) heterogeneous disease classification, and (v) insufficient number of studies. As a result, many of the conclusions raised are not reproducible. In addition, many meta-analyses in this area are not homogeneous enough, for example, in terms of (i) drug concentrations, (ii) drug selection, (iii) timing of treatment, and (iv) initial pathophysiological definition (cf. ref. [9]). It is clear that more meaningful and stratified clinical trials should lead to a greater consensus between authorities, which would significantly improve the implementation of pharmacogenomic drug labelling in clinical practice.

According to my opinion, predictive pharmacogenomics should only be used if the gene–drug pair is well defined and the effects of gene variation at therapeutic concentrations are known to be clinically relevant. In this regard, the FDA has an interesting website10 where gene–drug pairs with pharmacogenetic associations related to (i) therapeutic management recommendations, (ii) effects on safety or response, and (iii) effects on pharmacokinetic properties are listed. These pharmacogenomic associations provided by the FDA relate to gene variants of enzymes that metabolize drugs, to gene transporters, and to gene variants that have been associated with a predisposition to certain adverse events. Interestingly, 70% of the 124 pharmacogenomic biomarkers in Group 1) are related to genetic variations only in the CYP2C9, CYP2C19, or CYP2D6 genes and 63% of the biomarkers are related to the CNS or oncology therapeutic areas and only propafenone and warfarin to the cardiovascular area. The FDA-approved metoprolol label does not contain any recommendations on pharmacogenomics.11

For scientists in the field of pharmacogenomics, it is obvious that the use of pharmacogenomic information in routine clinical practice is underdeveloped or underutilized in most European and American countries. Clear, concise guidelines aimed more at clinicians in routine care would improve implementation in the future. In this context, it is important to limit these guidelines to cases where the genetic aspect is indeed substantial compared with other factors influencing interindividual variability in drug response and adverse events are used, that is, to focus only on relevant genetic variants causing a PM or a UM phenotype (see Figure 1 ).

Many of the pharmacogenomic guidelines that have been produced are very extensive and run to many pages. They are mainly aimed at professionals in the field, many of them in the biotech industry as stakeholders in the field. However, as mentioned, there is a lack of guidelines with a purely clinical profile covering the most important parts of pharmacogenomics in different therapeutic areas. It can be argued that producing guidelines that require a huge amount of work and focus on drug therapies with limited or no clinical relevance would be a waste of time. However, future targeted guidelines, developed in close collaboration with physicians in the different therapeutic areas and regularly updated, would benefit the implementation of pharmacogenomics in health care and lead to more cost-effective and better-individualized pharmacotherapy.

No funding was received for this work.

Magnus Ingelman-Sundberg is a co-founder and shareholder of HepaPredict AB.

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来源期刊
CiteScore
12.70
自引率
7.50%
发文量
290
审稿时长
2 months
期刊介绍: Clinical Pharmacology & Therapeutics (CPT) is the authoritative cross-disciplinary journal in experimental and clinical medicine devoted to publishing advances in the nature, action, efficacy, and evaluation of therapeutics. CPT welcomes original Articles in the emerging areas of translational, predictive and personalized medicine; new therapeutic modalities including gene and cell therapies; pharmacogenomics, proteomics and metabolomics; bioinformation and applied systems biology complementing areas of pharmacokinetics and pharmacodynamics, human investigation and clinical trials, pharmacovigilence, pharmacoepidemiology, pharmacometrics, and population pharmacology.
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