从青少年痛风队列的全基因组测序中发现早发痛风的新基因位点。

IF 11.4 1区 医学 Q1 RHEUMATOLOGY Arthritis & Rheumatology Pub Date : 2024-08-08 DOI:10.1002/art.42969
Aichang Ji, Yang Sui, Xiaomei Xue, Xiapeng Ji, Wenrui Shi, Yongyong Shi, Robert Terkeltaub, Nicola Dalbeth, Riku Takei, Fei Yan, Mingshu Sun, Maichao Li, Jie Lu, Lingling Cui, Zhen Liu, Can Wang, Xinde Li, Lin Han, Zhanjie Fang, Wenyan Sun, Yue Liang, Yuwei He, Guangmin Zheng, Xuefeng Wang, Jiayi Wang, Hui Zhang, Lei Pang, Han Qi, Yushuang Li, Zan Cheng, Zhiqiang Li, Jingfa Xiao, Changqing Zeng, Tony R Merriman, Hongzhu Qu, Xiangdong Fang, Changgui Li
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引用次数: 0

摘要

目的:青少年和早发性痛风的发病机制尚不清楚。本研究旨在发现与早发痛风相关的变异:我们对905名青少年痛风患者(痛风发病年龄为12-19岁)进行了全基因组测序,以发现与痛风相关的常见和低频SNV。在由 2834 人组成的早发性痛风队列(痛风发病年龄小于 30 岁)中对候选常见 SNV 进行了基因分型,并对发现队列和复制队列进行了荟萃分析,以确定与早发性痛风相关的位点。转录组和表观基因组分析、人外周血白细胞的 RT-qPCR 和 RNA-seq 以及人 THP-1 巨噬细胞的基因敲除实验研究了候选基因 RCOR1 的调控和功能:结果:除了以前与小儿痛风和早发性痛风有关的尿酸盐转运体 ABCG2 外,我们还发现了两个新的基因位点(Pmeta < 5.0 × 10-8):rs12887440(RCOR1)和 rs35213808(FSTL5-MIR4454)。此外,我们还在 ABCG2 和 SLC22A12 中发现了由低频 SNV 驱动的关联。RCOR1 中的 SNV 与血液白细胞 mRNA 水平升高有关。THP-1巨噬细胞培养研究显示,RCOR1的降低有可能抑制痛风性炎症:结论:这是首次对青少年痛风进行全面的基因鉴定。已确定的早发性痛风风险位点介导了对晶体的炎症反应,而晶体可能介导痛风性关节炎。这项研究将有助于风险预测和预防青少年痛风的治疗干预。
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Novel Genetic Loci in Early-Onset Gout Derived From Whole-Genome Sequencing of an Adolescent Gout Cohort.

Objective: Mechanisms underlying the adolescent-onset and early-onset gout are unclear. This study aimed to discover variants associated with early-onset gout.

Methods: We conducted whole-genome sequencing in a discovery adolescent-onset gout cohort of 905 individuals (gout onset 12 to 19 years) to discover common and low-frequency single-nucleotide variants (SNVs) associated with gout. Candidate common SNVs were genotyped in an early-onset gout cohort of 2,834 individuals (gout onset ≤30 years old), and meta-analysis was performed with the discovery and replication cohorts to identify loci associated with early-onset gout. Transcriptome and epigenomic analyses, quantitative real-time polymerase chain reaction and RNA sequencing in human peripheral blood leukocytes, and knock-down experiments in human THP-1 macrophage cells investigated the regulation and function of candidate gene RCOR1.

Results: In addition to ABCG2, a urate transporter previously linked to pediatric-onset and early-onset gout, we identified two novel loci (Pmeta < 5.0 × 10-8): rs12887440 (RCOR1) and rs35213808 (FSTL5-MIR4454). Additionally, we found associations at ABCG2 and SLC22A12 that were driven by low-frequency SNVs. SNVs in RCOR1 were linked to elevated blood leukocyte messenger RNA levels. THP-1 macrophage culture studies revealed the potential of decreased RCOR1 to suppress gouty inflammation.

Conclusion: This is the first comprehensive genetic characterization of adolescent-onset gout. The identified risk loci of early-onset gout mediate inflammatory responsiveness to crystals that could mediate gouty arthritis. This study will contribute to risk prediction and therapeutic interventions to prevent adolescent-onset gout.

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来源期刊
Arthritis & Rheumatology
Arthritis & Rheumatology RHEUMATOLOGY-
CiteScore
20.90
自引率
3.00%
发文量
371
期刊介绍: Arthritis & Rheumatology is the official journal of the American College of Rheumatology and focuses on the natural history, pathophysiology, treatment, and outcome of rheumatic diseases. It is a peer-reviewed publication that aims to provide the highest quality basic and clinical research in this field. The journal covers a wide range of investigative areas and also includes review articles, editorials, and educational material for researchers and clinicians. Being recognized as a leading research journal in rheumatology, Arthritis & Rheumatology serves the global community of rheumatology investigators and clinicians.
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