肺癌 M2 巨噬细胞相关基因特征的预后和免疫治疗意义

IF 3.3 3区 医学 Q2 ONCOLOGY Journal of Cancer Pub Date : 2024-07-22 eCollection Date: 2024-01-01 DOI:10.7150/jca.98044
Haixia Wu, Yilin Yu, Wei Wang, Gen Lin, Shaolin Lin, Jiguang Zhang, Zhaojun Yu, Jiewei Luo, Deju Ye, Wu Chi, Xing Lin
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引用次数: 0

摘要

研究目的我们旨在研究肺癌(LC)患者中 M2 巨噬细胞相关基因的免疫学意义,特别是构建一个风险评分来预测患者的预后和对免疫疗法的反应。方法我们通过识别和整合12个M2巨噬细胞相关基因,建立了一个新的风险评分。风险评分通过将风险基因的表达水平乘以各自的系数计算得出。通过综合富集分析,我们探索了区分高风险组和低风险组的潜在功能。此外,我们还研究了不同风险组患者与免疫浸润之间的关系以及他们对免疫疗法的反应。我们获取了单细胞 RNA 测序数据,以确定 RNF130 表达的空间模式。使用 TCGA 数据集检测 RNF130 的表达,并通过 HPA 验证。采用 qRT-PCR 技术检测 LC 细胞中 RNF130 的表达。最后,通过体外实验验证了 RNF130 的表达和功能。结果结果表明,由12个M2巨噬细胞相关基因构建的风险评分是一个独立的预后因素。与低风险组相比,高风险组患者的预后明显较差。功能富集分析表明,风险评分与免疫之间存在显著关系。此外,我们还使用七种免疫算法探讨了不同风险组的免疫浸润情况。结果显示,高风险组患者与 B 细胞、CD4+ 细胞和 CD8+ 细胞的免疫浸润呈负相关。我们利用免疫治疗反应数据库进一步验证了这些发现,结果显示高危患者更有可能表现出免疫逃避,免疫治疗效果可能较差。此外,药物敏感性分析表明,与低风险组相比,高风险组患者对某些化疗药物和靶向药物更敏感。单细胞分析表明,巨噬细胞是RNF130的主要分布部位。TCGA和HPA数据库的结果表明,RNF130在LC中有低表达的趋势。最后,体外实验进一步验证了 RNF130 在 LC 细胞中的表达和功能。结论LC中M2巨噬细胞相关基因构建的高风险组与不良预后、低免疫细胞浸润和免疫治疗反应较差密切相关。该风险评分有助于区分和预测 LC 患者的预后和免疫状态,从而帮助制定精准的个性化免疫治疗策略。
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Prognostic and immunotherapeutic significances of M2 macrophage-related genes signature in lung cancer.

Objective: We aimed to investigate the immunological significance of M2 macrophage-related genes in lung cancer (LC) patients, specifically focusing on constructing a risk score to predict patient prognosis and response to immunotherapy. Methods: We developed a novel risk score by identifying and incorporating 12 M2 macrophage-related genes. The risk score was calculated by multiplying the expression levels of risk genes by their respective coefficients. Through comprehensive enrichment analysis, we explored the potential functions distinguishing high- and low-risk groups. Moreover, we examined the relationship between patients in different risk groups and immune infiltration as well as their response to immunotherapy. The single-cell RNA sequencing data were acquired to ascertain the spatial pattern of RNF130 expression. The expression of RNF130 was examined using TCGA datasets and verified by HPA. The qRT-PCR was employed to examine RNF130 expression in LC cells. Finally, in vitro experiments were carried out to validate the expression and function of RNF130. Results: Our results indicated that the risk score constructed from 12 M2 macrophage-related genes was an independent prognostic factor. Patients in the high-risk group had a significantly worse prognosis compared to those in the low-risk group. Functional enrichment analysis showed a significant relationship between the risk score and immunity. Furthermore, we explored immune infiltration in different risk groups using seven immune algorithms. The results demonstrated a negative correlation between high-risk group patients and immune infiltration of B cells, CD4+ cells, and CD8+ cells. We further validated these findings using an immunotherapy response database, which revealed that high-risk patients were more likely to exhibit immune evasion and might have poorer immunotherapy outcomes. Additionally, drug sensitivity analysis indicated that patients in the high-risk group were more sensitive to certain chemotherapeutic and targeted drugs than those in the low-risk group. Single-cell analysis indicated that macrophages were the primary site of RNF130 distribution. The results from the TCGA and HPA database demonstrated a trend toward a low expression of RNF130 in LC. Finally, in vitro experiments further validated the expression and function of RNF130 in LC cells. Conclusions: The high-risk group constructed with M2 macrophage-related genes in LC was closely associated with poor prognosis, low immune cell infiltration, and poorer response to immunotherapy. This risk score can help differentiate and predict the prognosis and immune status of LC patients, thereby aiding in the development of precise and personalized immunotherapy strategies.

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来源期刊
Journal of Cancer
Journal of Cancer ONCOLOGY-
CiteScore
8.10
自引率
2.60%
发文量
333
审稿时长
12 weeks
期刊介绍: Journal of Cancer is an open access, peer-reviewed journal with broad scope covering all areas of cancer research, especially novel concepts, new methods, new regimens, new therapeutic agents, and alternative approaches for early detection and intervention of cancer. The Journal is supported by an international editorial board consisting of a distinguished team of cancer researchers. Journal of Cancer aims at rapid publication of high quality results in cancer research while maintaining rigorous peer-review process.
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