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Integrative Multi-Omics and Single-Cell Profiling Identify Chitinase Domain Containing Protein 1 (CHID1) as a Prognostic Biomarker in Glioblastoma. 整合多组学和单细胞分析鉴定几丁质酶结构域蛋白1 (CHID1)作为胶质母细胞瘤预后的生物标志物。
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-03-17 eCollection Date: 2026-01-01 DOI: 10.7150/jca.130519
Sachin Kumar, Chung-Che Wu, Dahlak Daniel Solomon, Juan Lorell Ngadio, Do Thi Minh Xuan, Ching-Chung Ko, Neethu Palekkode, Ayman Fathima, Hung-Yun Lin, Hui-Ru Lin, Chih-Yang Wang, Yung-Kuo Lee, Ngoc Uyen Nhi Nguyen

Glioblastoma multiforme (GBM), the most aggressive primary brain tumor, is characterized by high recurrence, metabolic plasticity, and complex tumor microenvironmental interactions. The human chitinase and chitinase-like protein family includes five members (CHI3L1, CHI3L2, CHIA, CHID1, and CHIT1) that share conserved chitinase-related domains but exhibit diverse biological functions in immune regulation and tissue remodeling. While chitinase-like proteins are recognized as mesenchymal-associated markers, however, the role of CHID1 in GBM remains largely unexplored. An integrative multi-omics strategy combining TCGA-GBM and CGGA transcriptomic datasets, single-cell RNA sequencing, and enrichment analyses (GSEA, GO, KEGG, and MetaCore) were used to investigate CHID1 expression patterns and associated transcriptional programs. Pharmacogenomic correlations and molecular docking were used to explore potential drug-response associations. CHID1 showed higher expression in GBM compared to the normal brain and was associated with poor overall survival. A single-cell analysis showed tumor-associated expression patterns of CHID1 across malignant samples. Pathway enrichment analyses identified transcriptional programs related to oxidative phosphorylation, redox-related processes, DNA repair, and cell cycle pathways. Collectively, this study provides a comprehensive multi-cohort and multi-modal characterization of CHID1 expression in GBM, integrating bulk transcriptomics, single-cell RNA sequencing, and tissue-level validation. The findings establish CHID1 as a GBM-associated transcriptional marker linked to metabolic and redox-related programs and provide a systematic resource for future investigations into chitinase family-related biology in GBM.

多形性胶质母细胞瘤(GBM)是最具侵袭性的原发性脑肿瘤,其特点是高复发率、代谢可塑性和复杂的肿瘤微环境相互作用。人类几丁质酶和几丁质酶样蛋白家族包括5个成员(CHI3L1、CHI3L2、CHIA、CHID1和CHIT1),它们共享几丁质酶相关的保守结构域,但在免疫调节和组织重塑中表现出不同的生物学功能。虽然几丁质酶样蛋白被认为是间质相关的标志物,然而,CHID1在GBM中的作用在很大程度上仍未被探索。采用综合多组学策略,结合TCGA-GBM和CGGA转录组数据集、单细胞RNA测序和富集分析(GSEA、GO、KEGG和MetaCore),研究CHID1表达模式和相关转录程序。使用药物基因组学相关性和分子对接来探索潜在的药物反应关联。与正常脑相比,CHID1在GBM中的表达更高,并与较差的总生存率相关。单细胞分析显示恶性肿瘤样本中CHID1的肿瘤相关表达模式。途径富集分析确定了与氧化磷酸化、氧化还原相关过程、DNA修复和细胞周期途径相关的转录程序。总的来说,本研究通过整合大量转录组学、单细胞RNA测序和组织水平验证,提供了GBM中CHID1表达的综合多队列和多模式表征。这些发现证实了CHID1是GBM相关的转录标记,与代谢和氧化还原相关程序有关,并为未来研究GBM中几丁质酶家族相关生物学提供了系统的资源。
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引用次数: 0
Recurrence of Adult Granulosa Cell Tumors: The Factors Affecting Secondary Recurrence and Survival After Recurrence. 成人颗粒细胞瘤的复发:影响继发性复发和复发后生存的因素。
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-03-17 eCollection Date: 2026-01-01 DOI: 10.7150/jca.127596
Hasan Volkan Ege, Derman Başaran, Murat Gültekin, Nejat Özgül, Nurattin Boran, Sevgi Koç, Yaprak Üstün, Caner Çakır, Dilek Yüksel, Okan Oktar, Gökçen Ege, Abdurrahman Alp Tokalıoğlu, Mustafa Şahin, Yeşim Uçar, Fatih Kılıç, Okan Aytekin, Burak Ersak, Mehmet Ünsal, Özlem Moraloğlu Tekin, Çiğdem Kılıç, Özgür Koçak, Çağatayhan Öztürk, Salih Taşkın, Fırat Ortaç, Işın Üreyen, Tayfun Toptaş, Sevda Baş, Mehmet Ali Narin, Tolga Taşçı, Gökhan Uçar, Mehmet Ali Şendur, Burak Civelek, Doğan Uncu, Özgür Erdoğan, Muzaffer Sancı, Hakan Raşit Yalçın, İlker Selçuk, Taner Turan

Introduction: Adult-type granulosa cell tumors (AGCTs) are rare ovarian neoplasms with a low overall incidence of recurrence, and also data on secondary recurrence and survival after relapse remain limited. This study aimed to identify factors associated with secondary recurrence and survival after recurrence in patients with recurrent AGCTs.

Methods: This multicenter retrospective study included 52 patients with recurrent AGCTs identified among 484 patients treated between 2000 and 2023. Clinical characteristics, treatment modalities, and outcomes were analyzed, with a particular focus on factors associated with secondary recurrence and survival after first recurrence. Recurrence-free survival and overall survival after first recurrence (OS-FR) were evaluated using Kaplan-Meier analysis.

Results: The mean follow-up duration was 99.2 ± 61.5 months. Secondary recurrence occurred in 17 patients (32.7%). A serum CA-125 level >35 U/mL at the time of first recurrence was significantly associated with an increased risk of secondary recurrence (p=0.01). Factors significantly associated with improved OS-FR included a CA-125 level ≤35 U/mL at initial diagnosis and at first recurrence, absence of residual disease following surgery for the first recurrence, and administration of salvage chemotherapy (all p<0.05). In subgroup analysis, salvage chemotherapy was associated with improved OS-FR in patients with residual disease or those who did not undergo surgery (p < 0.01), but not in patients who achieved complete cytoreduction (p = 0.67).

Conclusions: Secondary recurrence remains a significant clinical challenge in AGCTs. Serum CA-125 levels, surgical outcomes at first recurrence, and the use of salvage chemotherapy may help management strategies in recurrent disease.

成人型颗粒细胞瘤(agct)是一种罕见的卵巢肿瘤,总体复发率较低,其继发复发和复发后生存率的数据仍然有限。本研究旨在确定与复发性agct患者继发复发和复发后生存相关的因素。方法:这项多中心回顾性研究纳入了2000年至2023年期间接受治疗的484例复发性agct患者中的52例。分析了临床特征、治疗方式和结果,特别关注与第一次复发后继发复发和生存相关的因素。采用Kaplan-Meier分析评估无复发生存期和首次复发后总生存期(OS-FR)。结果:平均随访时间为99.2±61.5个月。继发复发17例(32.7%)。首次复发时血清CA-125水平bb0 35 U/mL与继发复发风险增加显著相关(p=0.01)。与OS-FR改善显著相关的因素包括初始诊断和首次复发时CA-125水平≤35 U/mL,首次复发手术后无残留疾病,以及给予补补性化疗(所有这些都是结论:agct继发复发仍然是一个重大的临床挑战。血清CA-125水平、首次复发时的手术结果和补救性化疗的使用可能有助于复发性疾病的管理策略。
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引用次数: 0
Integrative analysis of lysosome-dependent cell death related molecular subtypes and prognosis prediction in papillary thyroid carcinoma. 甲状腺乳头状癌中溶酶体依赖细胞死亡相关分子亚型的综合分析及预后预测。
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-03-17 eCollection Date: 2026-01-01 DOI: 10.7150/jca.129191
Ying Xu, Qiong Wang, Na Zhang, Fugeng He, Xiaochun Mao

Background: Papillary thyroid carcinoma (PTC), the most common thyroid malignancy, shows marked clinical heterogeneity despite generally favorable outcomes. Lysosome-dependent cell death (LDCD), a form of programmed death triggered by lysosomal membrane permeabilization, has emerged as a potential cancer therapy target, but its role in PTC remains unclear.

Methods: Transcriptomic data from public cohorts were analyzed to identify LDCD-related genes (LDCDRG) associated with PTC prognosis. Cox analysis and LASSO regression analyses were performed to construct a prognostic model. Immune landscape, drug sensitivity, and single-cell expression profiles were examined. Functional experiments were conducted in vitro to verify the biological effects of the key gene LMTK3 on PTC cell proliferation, viability, and invasion.

Results: Nineteen LDCDRG were differentially expressed between normal and tumor tissues, defining three molecular subtypes with distinct immune and prognostic profiles. A six-LDCDRG signature (LMTK3, MCM5, NXF1, TUBB4B, LIMCH1 and APH1B) effectively stratified patients into high- and low-risk groups with significantly different survival outcomes and acceptable predictive performance. High-risk patients showed reduced immune infiltration and lower predicted immunotherapy-related immune activity. LMTK3, the highest-risk gene, was highly expressed in PTC cells, and its knockdown suppressed proliferation and invasion in vitro.

Conclusions: The established six-LDCDRG signature provides an exploratory tool for risk stratification and survival prediction, while LMTK3 emerges as potential target worthy of further investigation. These findings deepen our understanding of lysosome-dependent cell death in thyroid carcinogenesis and may provide insights into the development of personalized management strategies and novel treatment approaches for high-risk PTC patients.

背景:甲状腺乳头状癌(PTC)是最常见的甲状腺恶性肿瘤,尽管预后良好,但其临床异质性明显。溶酶体依赖性细胞死亡(LDCD)是一种由溶酶体膜渗透引发的程序性死亡形式,已成为潜在的癌症治疗靶点,但其在PTC中的作用尚不清楚。方法:分析来自公共队列的转录组学数据,以确定与PTC预后相关的lcdd相关基因(LDCDRG)。采用Cox分析和LASSO回归分析构建预后模型。检测免疫景观、药物敏感性和单细胞表达谱。通过体外功能实验验证关键基因LMTK3对PTC细胞增殖、活力和侵袭的生物学效应。结果:19个LDCDRG在正常和肿瘤组织中表达差异,定义了三种具有不同免疫和预后特征的分子亚型。6个ldcdrg特征(LMTK3、MCM5、NXF1、TUBB4B、LIMCH1和APH1B)有效地将患者分为高风险和低风险组,其生存结局和可接受的预测性能存在显著差异。高危患者免疫浸润减少,预测免疫治疗相关免疫活性降低。风险最高的基因LMTK3在PTC细胞中高表达,其敲低抑制了PTC细胞的体外增殖和侵袭。结论:已建立的6 - ldcdrg特征为风险分层和生存预测提供了探索性工具,而LMTK3是值得进一步研究的潜在靶点。这些发现加深了我们对甲状腺癌发生中溶酶体依赖性细胞死亡的理解,并可能为高风险PTC患者的个性化管理策略和新治疗方法的发展提供见解。
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引用次数: 0
A CRM-Integrated ypT Staging System Improves Prognostic Stratification Following Neoadjuvant Therapy in Rectal Cancer. 一种crm集成的ypT分期系统改善了直肠癌新辅助治疗后的预后分层。
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-03-17 eCollection Date: 2026-01-01 DOI: 10.7150/jca.129779
Wan-Hsuan Chow, Chung-Han Ho, Yi-Chen Chen, Hsuan-Yi Huang, Ching-Chieh Yang

Introduction: The ypT staging system has limited prognostic value after neoadjuvant therapy, as it primarily reflects only tumor characteristics alone. This study proposes a novel staging system that integrates circumferential resection margin (CRM) status with the ypT category to enhance prognostic accuracy following neoadjuvant chemoradiotherapy (nCRT) for rectal cancer.

Methods: We analyzed data from 4,308 rectal adenocarcinoma patients treated with nCRT followed by surgery, using the Taiwan Cancer Registry and National Health Insurance Research Database (2011-2021). CRM involvement was defined as a margin ≤1 mm. Overall survival was assessed using multivariable Cox regression, and prognostic performance of the proposed CRM-integrated ypT staging system was compared with the American Joint Committee on Cancer (AJCC) TNM system using Harrell's c-statistic.

Results: CRM involvement (≤1 mm) was significantly associated with worse 5-year survival (adjusted odds ratio, 0.44; 95% CI, 0.31-0.61). Due to the low rate of CRM positivity in ypT0-2 patients, a modified ypT classification was established: new ypT3 (ypT3 and CRM-), new ypT4A (ypT4A and CRM-), new ypT4B (ypT3 and CRM+ or ypT4B and CRM-), and new ypT4C (ypT4A and CRM+ or ypT4B and CRM+). This system demonstrated better prognostic discrimination than the current AJCC classification (Harrell's c-statistic: 0.756 vs. 0.752, P = 0.034).

Conclusions: Incorporating CRM into the ypT stage offers survival stratification and may guide more individualized postoperative treatment strategies for rectal cancer patients after nCRT.

简介:新辅助治疗后的ypT分期系统的预后价值有限,因为它主要仅反映肿瘤特征。本研究提出了一种新的分期系统,将环切缘(CRM)状态与ypT类别相结合,以提高直肠癌新辅助放化疗(nCRT)后的预后准确性。方法:我们使用台湾癌症登记处和国民健康保险研究数据库(2011-2021)分析了4,308例接受nCRT治疗并进行手术的直肠腺癌患者的数据。CRM介入被定义为边缘≤1mm。使用多变量Cox回归评估总生存率,并使用Harrell c统计量将拟议的crm整合的ypT分期系统与美国癌症联合委员会(AJCC) TNM系统的预后性能进行比较。结果:CRM介入(≤1 mm)与较差的5年生存率显著相关(校正优势比0.44;95% CI, 0.31-0.61)。由于ypT0-2患者的CRM阳性率较低,因此建立了改良的ypT分类:新ypT3 (ypT3与CRM-)、新ypT4A (ypT4A与CRM-)、新ypT4B (ypT3与CRM+或ypT4B与CRM-)、新ypT4C (ypT4A与CRM+或ypT4B与CRM+)。该系统比目前的AJCC分类具有更好的预后辨别能力(Harrell的c统计量:0.756 vs. 0.752, P = 0.034)。结论:将CRM纳入ppt期提供了生存分层,可以指导直肠癌nCRT术后患者更个性化的术后治疗策略。
{"title":"A CRM-Integrated ypT Staging System Improves Prognostic Stratification Following Neoadjuvant Therapy in Rectal Cancer.","authors":"Wan-Hsuan Chow, Chung-Han Ho, Yi-Chen Chen, Hsuan-Yi Huang, Ching-Chieh Yang","doi":"10.7150/jca.129779","DOIUrl":"10.7150/jca.129779","url":null,"abstract":"<p><strong>Introduction: </strong>The ypT staging system has limited prognostic value after neoadjuvant therapy, as it primarily reflects only tumor characteristics alone. This study proposes a novel staging system that integrates circumferential resection margin (CRM) status with the ypT category to enhance prognostic accuracy following neoadjuvant chemoradiotherapy (nCRT) for rectal cancer.</p><p><strong>Methods: </strong>We analyzed data from 4,308 rectal adenocarcinoma patients treated with nCRT followed by surgery, using the Taiwan Cancer Registry and National Health Insurance Research Database (2011-2021). CRM involvement was defined as a margin ≤1 mm. Overall survival was assessed using multivariable Cox regression, and prognostic performance of the proposed CRM-integrated ypT staging system was compared with the American Joint Committee on Cancer (AJCC) TNM system using Harrell's c-statistic.</p><p><strong>Results: </strong>CRM involvement (≤1 mm) was significantly associated with worse 5-year survival (adjusted odds ratio, 0.44; 95% CI, 0.31-0.61). Due to the low rate of CRM positivity in ypT0-2 patients, a modified ypT classification was established: new ypT3 (ypT3 and CRM-), new ypT4A (ypT4A and CRM-), new ypT4B (ypT3 and CRM+ or ypT4B and CRM-), and new ypT4C (ypT4A and CRM+ or ypT4B and CRM+). This system demonstrated better prognostic discrimination than the current AJCC classification (Harrell's c-statistic: 0.756 vs. 0.752, P = 0.034).</p><p><strong>Conclusions: </strong>Incorporating CRM into the ypT stage offers survival stratification and may guide more individualized postoperative treatment strategies for rectal cancer patients after nCRT.</p>","PeriodicalId":15183,"journal":{"name":"Journal of Cancer","volume":"17 3","pages":"679-687"},"PeriodicalIF":3.2,"publicationDate":"2026-03-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13003605/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147498975","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fluid-Derived Organoids from Pleural Effusion and Ascites: Emerging Models for Drug Resistance and Personalized Oncology. 来自胸腔积液和腹水的液体衍生类器官:耐药性和个体化肿瘤的新兴模型。
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-03-04 eCollection Date: 2026-01-01 DOI: 10.7150/jca.127511
Yongyang Chen, Xiaoqing Xu, Jialin Chen, Miao Yin, Jinhui Chen, Zhanghua Qi, Ming Shi, Wenmei Su

Malignant pleural effusion (MPE) and malignant ascites (MA) are common complications in advanced-stage cancers, often signifying disease progression and resistance to treatment. Compared to tissue biopsies or surgical specimens, materials derived from effusions offer advantages such as minimal invasiveness, ease of accessibility, and the feasibility of repeated collection during therapeutic interventions. Organoids generated from tumor cells in effusions, termed fluid-derived organoids (FDOs), have demonstrated the ability to maintain genetic heterogeneity and accurately replicate patient-specific tumor phenotypes. These characteristics position FDOs as promising models for investigating drug resistance mechanisms and informing personalized oncology strategies. In the context of lung cancer, organoids derived from pleural effusions have been employed to study acquired resistance to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors and immunotherapy. Similarly, in ovarian and gastrointestinal cancers, organoids derived from ascites have proven to be valuable platforms for examining chemotherapy resistance and conducting drug sensitivity testing. FDOs have shown significant potential for translational applications by effectively correlating ex vivo drug responses with clinical outcomes, thus facilitating real-time monitoring of resistance evolution. However, several challenges remain, such as achieving culture standardization, maintaining the integrity of tumor microenvironment components, and integrating with multi-omics approaches. This review provides a comprehensive overview of recent advancements in the use of pleural effusion- and ascites-derived organoids for drug resistance research, underscores their applications in personalized oncology, and explores future research directions.

恶性胸腔积液(MPE)和恶性腹水(MA)是晚期癌症的常见并发症,通常表明疾病进展和治疗抵抗。与组织活检或手术标本相比,从积液中提取的材料具有侵入性小、易于获取以及在治疗干预期间重复收集的可行性等优点。由肿瘤细胞在积液中产生的类器官,称为液体衍生类器官(FDOs),已经证明能够保持遗传异质性并准确复制患者特异性肿瘤表型。这些特点使fdo成为研究耐药机制和告知个性化肿瘤策略的有前途的模型。在肺癌的背景下,来自胸腔积液的类器官已被用于研究对表皮生长因子受体(EGFR)酪氨酸激酶抑制剂和免疫治疗的获得性耐药。同样,在卵巢癌和胃肠道癌症中,来自腹水的类器官已被证明是检查化疗耐药性和进行药物敏感性测试的宝贵平台。fdo通过有效地将体外药物反应与临床结果相关联,从而促进耐药性演变的实时监测,已显示出巨大的转化应用潜力。然而,仍然存在一些挑战,例如实现培养标准化,保持肿瘤微环境成分的完整性,以及与多组学方法的整合。本文综述了胸腔积液和腹水来源的类器官用于耐药研究的最新进展,强调了它们在个性化肿瘤学中的应用,并探讨了未来的研究方向。
{"title":"Fluid-Derived Organoids from Pleural Effusion and Ascites: Emerging Models for Drug Resistance and Personalized Oncology.","authors":"Yongyang Chen, Xiaoqing Xu, Jialin Chen, Miao Yin, Jinhui Chen, Zhanghua Qi, Ming Shi, Wenmei Su","doi":"10.7150/jca.127511","DOIUrl":"10.7150/jca.127511","url":null,"abstract":"<p><p>Malignant pleural effusion (MPE) and malignant ascites (MA) are common complications in advanced-stage cancers, often signifying disease progression and resistance to treatment. Compared to tissue biopsies or surgical specimens, materials derived from effusions offer advantages such as minimal invasiveness, ease of accessibility, and the feasibility of repeated collection during therapeutic interventions. Organoids generated from tumor cells in effusions, termed fluid-derived organoids (FDOs), have demonstrated the ability to maintain genetic heterogeneity and accurately replicate patient-specific tumor phenotypes. These characteristics position FDOs as promising models for investigating drug resistance mechanisms and informing personalized oncology strategies. In the context of lung cancer, organoids derived from pleural effusions have been employed to study acquired resistance to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors and immunotherapy. Similarly, in ovarian and gastrointestinal cancers, organoids derived from ascites have proven to be valuable platforms for examining chemotherapy resistance and conducting drug sensitivity testing. FDOs have shown significant potential for translational applications by effectively correlating <i>ex vivo</i> drug responses with clinical outcomes, thus facilitating real-time monitoring of resistance evolution. However, several challenges remain, such as achieving culture standardization, maintaining the integrity of tumor microenvironment components, and integrating with multi-omics approaches. This review provides a comprehensive overview of recent advancements in the use of pleural effusion- and ascites-derived organoids for drug resistance research, underscores their applications in personalized oncology, and explores future research directions.</p>","PeriodicalId":15183,"journal":{"name":"Journal of Cancer","volume":"17 3","pages":"614-625"},"PeriodicalIF":3.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13003542/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147499011","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
FAM188B promotes progression of hepatocellular carcinoma by regulating YAP/TAZ via interaction with USP10. FAM188B通过与USP10的相互作用调节YAP/TAZ,从而促进肝细胞癌的进展。
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-03-04 eCollection Date: 2026-01-01 DOI: 10.7150/jca.125659
Siwei Hu, Yuting Wen, Yihong Chen, Yuliang Fang, Mingshan Mu, Linglan Tu, Wenhu Chen, Kangsheng Tu, Xin Liu, Qiuran Xu, Dongsheng Huang, Xiaoyan Li

Background: Hepatocellular carcinoma (HCC) is one of the most common malignancies worldwide and its incidence and mortality rates remain high. Therefore, new diagnostic and therapeutic approaches are urgently required. Family with sequence similarity 188 member B (FAM188B) encodes an evolutionarily conserved protein that is highly expressed in various cancers. While FAM188B has been implicated in the progression of several tumors, its role in HCC progression remains unknown.

Methods: We analyzed FAM188B expression in HCC using The Cancer Genome Atlas (TCGA) and The University of Alabama at Birmingham Cancer data analysis Portal (UALCAN) databases. Functional studies included in vitro proliferation, migration, and invasion assays, as well as in vivo xenograft models. Co-immunoprecipitation (Co-IP), Western blotting, and immunofluorescence were used to investigate the FAM188B-Ubiquitin-specific peptidase 10 (USP10)-Yes-associated protein/Transcriptional coactivator with PDZ-binding motif (YAP/TAZ) interaction.

Results: FAM188B was found highly expressed in HCC cells and associated with poor prognosis. Both in vitro and in vivo, FAM188B promoted the proliferation, migration, and invasion of HCC. FAM188B directly interacts with and stabilizes USP10 and the downregulation of FAM188B by shRNA led to decreased USP10 and YAP/TAZ protein levels, suggesting that FAM188B may regulate the YAP/TAZ pathway through its interaction with USP10.

Conclusion: Our findings reveal that FAM188B plays a crucial role in enhancing HCC cell proliferation, migration, and invasion, primarily through regulating the USP10/YAP/TAZ signaling axis, which was validated in vitro and in vivo.

背景:肝细胞癌(HCC)是世界范围内最常见的恶性肿瘤之一,其发病率和死亡率仍然很高。因此,迫切需要新的诊断和治疗方法。序列相似家族188成员B (FAM188B)编码一种在多种癌症中高度表达的进化保守蛋白。虽然FAM188B与几种肿瘤的进展有关,但其在HCC进展中的作用尚不清楚。方法:我们使用癌症基因组图谱(TCGA)和阿拉巴马大学伯明翰癌症数据分析门户(UALCAN)数据库分析FAM188B在HCC中的表达。功能研究包括体外增殖、迁移和侵袭试验,以及体内异种移植模型。采用免疫共沉淀法(Co-IP)、免疫印迹法和免疫荧光法研究fam188b -泛素特异性肽酶10 (USP10)- yes相关蛋白/ pdz结合基序转录共激活因子(YAP/TAZ)的相互作用。结果:FAM188B在HCC细胞中高表达,预后较差。在体外和体内,FAM188B均能促进HCC的增殖、迁移和侵袭。FAM188B直接与USP10相互作用并稳定USP10, shRNA下调FAM188B导致USP10和YAP/TAZ蛋白水平降低,提示FAM188B可能通过与USP10相互作用调控YAP/TAZ通路。结论:我们的研究结果表明,FAM188B主要通过调节USP10/YAP/TAZ信号轴,在促进HCC细胞增殖、迁移和侵袭中起着至关重要的作用,这一结果在体外和体内得到了验证。
{"title":"FAM188B promotes progression of hepatocellular carcinoma by regulating YAP/TAZ via interaction with USP10.","authors":"Siwei Hu, Yuting Wen, Yihong Chen, Yuliang Fang, Mingshan Mu, Linglan Tu, Wenhu Chen, Kangsheng Tu, Xin Liu, Qiuran Xu, Dongsheng Huang, Xiaoyan Li","doi":"10.7150/jca.125659","DOIUrl":"10.7150/jca.125659","url":null,"abstract":"<p><strong>Background: </strong>Hepatocellular carcinoma (HCC) is one of the most common malignancies worldwide and its incidence and mortality rates remain high. Therefore, new diagnostic and therapeutic approaches are urgently required. Family with sequence similarity 188 member B (FAM188B) encodes an evolutionarily conserved protein that is highly expressed in various cancers. While FAM188B has been implicated in the progression of several tumors, its role in HCC progression remains unknown.</p><p><strong>Methods: </strong>We analyzed FAM188B expression in HCC using The Cancer Genome Atlas (TCGA) and The University of Alabama at Birmingham Cancer data analysis Portal (UALCAN) databases. Functional studies included <i>in vitro</i> proliferation, migration, and invasion assays, as well as <i>in vivo</i> xenograft models. Co-immunoprecipitation (Co-IP), Western blotting, and immunofluorescence were used to investigate the FAM188B-Ubiquitin-specific peptidase 10 (USP10)-Yes-associated protein/Transcriptional coactivator with PDZ-binding motif (YAP/TAZ) interaction.</p><p><strong>Results: </strong>FAM188B was found highly expressed in HCC cells and associated with poor prognosis. Both <i>in vitro</i> and <i>in vivo</i>, FAM188B promoted the proliferation, migration, and invasion of HCC. FAM188B directly interacts with and stabilizes USP10 and the downregulation of FAM188B by shRNA led to decreased USP10 and YAP/TAZ protein levels, suggesting that FAM188B may regulate the YAP/TAZ pathway through its interaction with USP10.</p><p><strong>Conclusion: </strong>Our findings reveal that FAM188B plays a crucial role in enhancing HCC cell proliferation, migration, and invasion, primarily through regulating the USP10/YAP/TAZ signaling axis, which was validated <i>in vitro</i> and <i>in vivo</i>.</p>","PeriodicalId":15183,"journal":{"name":"Journal of Cancer","volume":"17 3","pages":"626-636"},"PeriodicalIF":3.2,"publicationDate":"2026-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13003555/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147498996","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impact of Skeletal Muscle-related Parameters on Survival in Patients with Advanced Pancreatic Cancer Treated with Gemcitabine plus Nab-paclitaxel as First-line Chemotherapy. 骨骼肌相关参数对吉西他滨联合nab -紫杉醇一线化疗晚期胰腺癌患者生存的影响
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-02-26 eCollection Date: 2026-01-01 DOI: 10.7150/jca.126673
Nanako Matsuo, Toshifumi Yamaguchi, Hiroki Yukami, Hiroyuki Kodama, Takako Ikegami, Toru Kadono, Shin Kameisihi, Dai Okemoto, Elham Fakhrejahani, Hiroki Nishikawa

Background: Sarcopenia, defined as a reduction in muscle mass assessed using scales such as the psoas muscle mass index (PMI), is accompanied by decreased muscle strength or physical function. However, sarcopenia's effect in patients with pancreatic cancer (PC) receiving chemotherapy remains unclear. In addition, recent international studies have demonstrated that intramuscular fat infiltration, assessed using parameters such as FRPM, is associated with poor prognosis across various malignancies. However, evidence regarding its prognostic significance in pancreatic cancer remains limited. We aimed to evaluate the relationship between sarcopenia and the prognosis of patients with PC receiving palliative chemotherapy.

Methods: We retrospectively reviewed patients diagnosed with unresectable PC who received gemcitabine plus nab-paclitaxel (GnP) as the first-line therapy at our hospital between 2018 and 2021. We calculated PMI, defined as the sum of the bilateral psoas muscle mass at the lumbar three (L3) level and FRPM, defined as the sum of areas within the psoas muscles corresponding to fat at the L3 level from Vincent® on the CT images. We compared the overall survival (OS) between the PMI-high and PMI-low groups and the FRPM-high and FRPM-low groups.

Results: Of 46 patients, 37 were eligible. Eighteen (49%) and 19 (51 %) patients were classified into PMI-high and PMI-low groups, respectively. Twenty (54%) and 17 patients (46%) were classified into FRPM-high and FRPM-low groups, respectively. The median OS was 16.4 months in PMI-high and 8.7 months in PMI-low groups (hazard ratio [HR]: 0.45, 95% confidence interval [CI]: 0.23-0.90, P < 0.01). The median OS was 15.6 months in FRPM-low and 8.5 months in FRPM-high groups (HR: 0.36, 95% CI: 0.18-0.76, P < 0.01). In multivariate analysis, the presence of ascites (P < 0.01), PMI-low (P = 0.02), and FRPM-high (P = 0.03) were independent adverse prognostic factors for OS.

Conclusion: Muscle-related parameters may be independent indicators of poor prognosis in patients with PC treated with first-line GnPs.

背景:肌少症,定义为使用腰肌质量指数(PMI)等量表评估肌肉质量的减少,伴随着肌肉力量或身体功能的下降。然而,肌肉减少症在接受化疗的胰腺癌(PC)患者中的作用尚不清楚。此外,最近的国际研究表明,使用FRPM等参数评估的肌肉内脂肪浸润与各种恶性肿瘤的不良预后相关。然而,关于其在胰腺癌预后意义的证据仍然有限。我们的目的是评估肌少症与接受姑息性化疗的PC患者预后的关系。方法:回顾性分析2018年至2021年在我院接受吉西他滨联合nab-紫杉醇(GnP)作为一线治疗的诊断为不可切除PC的患者。我们计算了PMI,定义为双侧腰大肌在腰椎三段(L3)水平的肌肉质量和FRPM的总和,定义为腰大肌在CT图像上对应于Vincent®的L3水平的脂肪面积的总和。我们比较了pmi高组和pmi低组以及frpm高组和frpm低组的总生存期(OS)。结果:46例患者中,37例符合条件。分别有18例(49%)和19例(51%)患者被分为pmi高组和pmi低组。frpm高组20例(54%),低组17例(46%)。pmi高组中位OS为16.4个月,pmi低组中位OS为8.7个月(风险比[HR]: 0.45, 95%可信区间[CI]: 0.23 ~ 0.90, P < 0.01)。frpm低组中位OS为15.6个月,frpm高组中位OS为8.5个月(HR: 0.36, 95% CI: 0.18-0.76, P < 0.01)。在多因素分析中,腹水的存在(P < 0.01)、pmi低(P = 0.02)和frpm高(P = 0.03)是OS的独立不良预后因素。结论:肌肉相关参数可能是一线GnPs治疗PC患者预后不良的独立指标。
{"title":"Impact of Skeletal Muscle-related Parameters on Survival in Patients with Advanced Pancreatic Cancer Treated with Gemcitabine plus Nab-paclitaxel as First-line Chemotherapy.","authors":"Nanako Matsuo, Toshifumi Yamaguchi, Hiroki Yukami, Hiroyuki Kodama, Takako Ikegami, Toru Kadono, Shin Kameisihi, Dai Okemoto, Elham Fakhrejahani, Hiroki Nishikawa","doi":"10.7150/jca.126673","DOIUrl":"10.7150/jca.126673","url":null,"abstract":"<p><strong>Background: </strong>Sarcopenia, defined as a reduction in muscle mass assessed using scales such as the psoas muscle mass index (PMI), is accompanied by decreased muscle strength or physical function. However, sarcopenia's effect in patients with pancreatic cancer (PC) receiving chemotherapy remains unclear. In addition, recent international studies have demonstrated that intramuscular fat infiltration, assessed using parameters such as FRPM, is associated with poor prognosis across various malignancies. However, evidence regarding its prognostic significance in pancreatic cancer remains limited. We aimed to evaluate the relationship between sarcopenia and the prognosis of patients with PC receiving palliative chemotherapy.</p><p><strong>Methods: </strong>We retrospectively reviewed patients diagnosed with unresectable PC who received gemcitabine plus nab-paclitaxel (GnP) as the first-line therapy at our hospital between 2018 and 2021. We calculated PMI, defined as the sum of the bilateral psoas muscle mass at the lumbar three (L3) level and FRPM, defined as the sum of areas within the psoas muscles corresponding to fat at the L3 level from Vincent® on the CT images. We compared the overall survival (OS) between the PMI-high and PMI-low groups and the FRPM-high and FRPM-low groups.</p><p><strong>Results: </strong>Of 46 patients, 37 were eligible. Eighteen (49%) and 19 (51 %) patients were classified into PMI-high and PMI-low groups, respectively. Twenty (54%) and 17 patients (46%) were classified into FRPM-high and FRPM-low groups, respectively. The median OS was 16.4 months in PMI-high and 8.7 months in PMI-low groups (hazard ratio [HR]: 0.45, 95% confidence interval [CI]: 0.23-0.90, P < 0.01). The median OS was 15.6 months in FRPM-low and 8.5 months in FRPM-high groups (HR: 0.36, 95% CI: 0.18-0.76, P < 0.01). In multivariate analysis, the presence of ascites (P < 0.01), PMI-low (P = 0.02), and FRPM-high (P = 0.03) were independent adverse prognostic factors for OS.</p><p><strong>Conclusion: </strong>Muscle-related parameters may be independent indicators of poor prognosis in patients with PC treated with first-line GnPs.</p>","PeriodicalId":15183,"journal":{"name":"Journal of Cancer","volume":"17 3","pages":"604-613"},"PeriodicalIF":3.2,"publicationDate":"2026-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13003557/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147499032","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular Mechanisms of Symptom Fluctuations in Malignant Tumor Patients: Stable by Day and Severe at Night. 恶性肿瘤患者症状波动的分子机制:白天稳定,夜晚严重。
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-02-18 eCollection Date: 2026-01-01 DOI: 10.7150/jca.128423
Zhongxuan Xie, Wei Jin, Juezhou Pang, Kangshuo Hu, Lihong Li

Patients with malignant tumors often experience fluctuations in the severity of their symptoms depending on the time of day. In traditional Chinese medicine, symptoms are said to follow a pattern of "mild in the morning, stable by day, worsening in the evening, and severe at night." This article investigates the circadian chronobiology of symptoms and examines their molecular pathophysiology. Evidence suggests that disruptions in core circadian clock genes, such as BMAL1 and PER, along with the dysregulation of cellular metabolic pathways, immune responses, and endocrine functions, synergistically facilitate tumor growth and metastasis during nocturnal periods. These molecular alterations contribute to symptom exacerbation through mechanisms which include direct tumor invasion, neural infiltration, inflammatory processes, dorsal root ganglion (DRG) sensitization, and abnormal melatonin secretion. The article further explores three chronotherapeutic strategies and assesses melatonin's role in targeted oncological therapy, aiming to optimize circadian regulation and symptom management, thereby providing a scientific foundation for personalized anti-tumor interventions that are based on circadian rhythms.

恶性肿瘤患者的症状严重程度往往随时间变化而变化。在中医中,症状被认为遵循“早晨轻微,白天稳定,晚上恶化,晚上严重”的模式。本文研究了症状的昼夜节律生物学,并检查了它们的分子病理生理学。有证据表明,核心生物钟基因(如BMAL1和PER)的破坏,以及细胞代谢途径、免疫反应和内分泌功能的失调,协同促进了肿瘤在夜间的生长和转移。这些分子改变通过肿瘤直接侵袭、神经浸润、炎症过程、背根神经节(DRG)致敏和褪黑激素分泌异常等机制导致症状加重。本文进一步探讨了三种时间治疗策略,并评估了褪黑激素在肿瘤靶向治疗中的作用,旨在优化昼夜节律调节和症状管理,从而为基于昼夜节律的个性化抗肿瘤干预提供科学依据。
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引用次数: 0
Proteasome Assembly Chaperone 3 Defines Metabolic-Immune Programs and Poor Prognosis in Breast Cancer via Multi-Omics Approaches. 蛋白酶体组装伴侣蛋白3通过多组学方法定义乳腺癌的代谢免疫程序和不良预后。
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-02-18 eCollection Date: 2026-01-01 DOI: 10.7150/jca.126116
Sachin Kumar, Hoang Dang Khoa Ta, Hao-Chien Yang, Chia-Lung Shih, Dahlak Daniel Solomon, Ching-Chung Ko, Do Thi Minh Xuan, Yung-Kuo Lee, Kai-Fu Chang, Hui-Ru Lin, Shu-Huei Kao, Jian-Ying Chuang, Jian-Bin Chen, Chih-Yang Wang, Ngoc Uyen Nhi Nguyen

The proteasome assembly chaperone (PSMG) gene family (comprised of PSMG1, PSMG2, PSMG3, and PSMG4) plays a critical role in proteasome biogenesis; however, its involvement in breast cancer remains poorly understood. Among these chaperones, PSMG3 is uniquely and markedly elevated in breast cancer and is associated with poor clinical outcomes. We systematically investigated the roles of PSMG family genes in breast cancer by integrating multi-cohort genomic and transcriptomic datasets, including TCGA-BRCA, METABRIC, and multiple NCBI GEO cohorts. Comprehensive bioinformatics analyses were performed using bulk RNA sequencing and single-cell RNA sequencing data. A gene set enrichment analysis (GSEA) and immune infiltration analyses (CIBERSORT and TIMER) were applied to characterize dysregulated biological pathways, tumor microenvironmental features, and clinical relevance. In addition, molecular docking analyses were conducted to assess the druggability and binding potential of PSMG family proteins with selected small-molecule inhibitors. Elevated PSMG3 expression was consistently associated with poor survival outcomes across multiple breast cancer cohorts. Functional enrichment analyses revealed that PSMG3-high tumors were characterized by activation of hypoxia-related signaling pathways and dysregulated fatty acid metabolism, suggesting a role for PSMG3 in metabolic reprogramming. Immune deconvolution analyses further demonstrated significant correlations between PSMG3 expression and distinct immune cell populations within the tumor microenvironment. These findings were supported by single-cell transcriptomic profiling, which revealed subtype-specific expression patterns of PSMG3 in malignant epithelial cell populations. This integrative multi-omics analysis identified PSMG3 as a clinically relevant proteasome assembly chaperone associated with aggressive breast cancer phenotypes, metabolic dysregulation, and tumor immune contexture. Collectively, these results highlight PSMG3 as a promising prognostic biomarker and potential therapeutic target in breast cancer.

蛋白酶体组装伴侣(PSMG)基因家族(包括PSMG1、PSMG2、PSMG3和PSMG4)在蛋白酶体的生物发生中起关键作用;然而,它与乳腺癌的关系仍然知之甚少。在这些伴侣蛋白中,PSMG3在乳腺癌中独特且显著升高,并与不良临床结果相关。我们通过整合多队列基因组和转录组数据集,包括TCGA-BRCA、METABRIC和多个NCBI GEO队列,系统地研究了PSMG家族基因在乳腺癌中的作用。综合生物信息学分析使用大量RNA测序和单细胞RNA测序数据进行。应用基因集富集分析(GSEA)和免疫浸润分析(CIBERSORT和TIMER)来表征失调的生物途径、肿瘤微环境特征和临床相关性。此外,我们还进行了分子对接分析,以评估PSMG家族蛋白与选定的小分子抑制剂的药物性和结合潜力。在多个乳腺癌队列中,PSMG3表达升高始终与较差的生存结果相关。功能富集分析显示,PSMG3高的肿瘤以缺氧相关信号通路激活和脂肪酸代谢失调为特征,提示PSMG3在代谢重编程中起作用。免疫反褶积分析进一步证明PSMG3表达与肿瘤微环境中不同免疫细胞群之间存在显著相关性。这些发现得到了单细胞转录组学分析的支持,该分析揭示了PSMG3在恶性上皮细胞群体中的亚型特异性表达模式。这项综合多组学分析确定PSMG3是一种与侵袭性乳腺癌表型、代谢失调和肿瘤免疫环境相关的临床相关蛋白酶体组装伴侣。总之,这些结果突出了PSMG3作为一种有希望的乳腺癌预后生物标志物和潜在的治疗靶点。
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引用次数: 0
Potential influence of omentin-1 genetic variants on the clinicopathological features of patients with hepatocellular carcinoma. 网膜蛋白1基因变异对肝细胞癌患者临床病理特征的潜在影响
IF 3.2 3区 医学 Q2 ONCOLOGY Pub Date : 2026-02-18 eCollection Date: 2026-01-01 DOI: 10.7150/jca.128357
Sung-Lin Hu, Hsiang-Lin Lee, Ming-Yu Lien, Edie-Rosmin Wu, Shun-Fa Yang, Chih-Hsin Tang

Hepatocellular carcinoma (HCC) ranks as the fifth supreme prevalent cancer within men globally and the ninth among female, serving as a significant contributor to cancer-associated deaths. The adipokine omentin-1 has been demonstrated to have a defensive effect by decreasing the secretion of proinflammatory cytokines. The connections among lifestyle factors that promote cancer, OMNT1 polymorphisms, and HCC are still not well understood. Our investigation focused on the influence of clinicopathological characteristics and four variants of the OMNT1 gene (rs2274907, rs35779394, rs4656959, and rs79209815) on healthy controls as well as Taiwanese individuals with HCC. According to our data, individuals with the OMNT1 rs79209815 variant (TC or CC genotypes) are at an elevated risk of progressing to stage III/IV disease and larger tumors than those with the TT genotype. Males exhibited these associations more prominently than females. Moreover, OMNT1 expression levels were markedly reduced in individuals with the wild-type TT homozygous genotype when compared to those with the TC or CC genotypes of rs79209815. The complexity of genetic influences on HCC is highlighted by our study, which suggests that OMNT1 polymorphisms may have an impact on tumor stage and progression.

肝细胞癌(HCC)在全球男性中排名第五,在女性中排名第九,是癌症相关死亡的重要原因。脂肪因子网膜蛋白-1已被证明通过减少促炎细胞因子的分泌而具有防御作用。促进癌症的生活方式因素、OMNT1多态性和HCC之间的联系尚不清楚。我们的研究重点是临床病理特征和四种OMNT1基因变异(rs2274907、rs35779394、rs4656959和rs79209815)对健康对照者和台湾HCC患者的影响。根据我们的数据,携带OMNT1 rs79209815变异(TC或CC基因型)的个体比携带TT基因型的个体进展为III/IV期疾病和更大肿瘤的风险更高。男性比女性更明显地表现出这些联系。此外,与rs79209815的TC或CC基因型相比,野生型TT纯合基因型个体的OMNT1表达水平显著降低。我们的研究强调了遗传对HCC影响的复杂性,这表明OMNT1多态性可能对肿瘤的分期和进展有影响。
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引用次数: 0
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