{"title":"优化随机森林变量选择以预测温带地区 Larix gmelinii var. principis-rupprechtii 的径向生长","authors":"","doi":"10.1016/j.foreco.2024.122159","DOIUrl":null,"url":null,"abstract":"<div><p>Drought induced great tree growth declines and high mortality, leading to high uncertainty in carbon storage estimation. The influences of droughts on tree growth had been extensively explored, however, how to predict tree growth during drought years to reduce uncertainty in carbon storage prediction is still challenging. We utilized a combined approach of random forest importance assessment and the \"VSURF\" package in R software to optimize the variable selection, and then used the selected variables in random forest and multiple linear regression (MLR) method to predict the tree growth based on 132 monthly climate variables and tree-ring network consisting of 1198 <em>Larix gmelinii</em> var. <em>principis-rupprechtii</em> trees from 48 sites. Forty-three out of 132 variables were selected if the random forest importance assessment was only used to selected climate variable, however, twelve important variables were identified by optimized variable selection, which further improve model efficiency with the least variables. The comparison between random forest and MLR showed that the predictions of the random forest model showed a better fit with the observed tree-ring values than MLR from 1989 to 2018. The predicted growth of <em>L. gmelinii</em> var<em>. principis-rupprechtii</em> is better in dense sites compared to sparse sites. During summer drought years, random forest performs well to predict tree growth in densely distributed sites. Our results highlighted the usage of optimized variable selection method combined with the random forest model to predict drought-year growth over the dense sites. Our study is crucial to predict drought-year carbon sink of planted larch forests under different climate changes scenarios in the future.</p></div>","PeriodicalId":12350,"journal":{"name":"Forest Ecology and Management","volume":null,"pages":null},"PeriodicalIF":3.7000,"publicationDate":"2024-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Optimizing variables selection of random forest to predict radial growth of Larix gmelinii var. principis-rupprechtii in temperate regions\",\"authors\":\"\",\"doi\":\"10.1016/j.foreco.2024.122159\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Drought induced great tree growth declines and high mortality, leading to high uncertainty in carbon storage estimation. The influences of droughts on tree growth had been extensively explored, however, how to predict tree growth during drought years to reduce uncertainty in carbon storage prediction is still challenging. We utilized a combined approach of random forest importance assessment and the \\\"VSURF\\\" package in R software to optimize the variable selection, and then used the selected variables in random forest and multiple linear regression (MLR) method to predict the tree growth based on 132 monthly climate variables and tree-ring network consisting of 1198 <em>Larix gmelinii</em> var. <em>principis-rupprechtii</em> trees from 48 sites. Forty-three out of 132 variables were selected if the random forest importance assessment was only used to selected climate variable, however, twelve important variables were identified by optimized variable selection, which further improve model efficiency with the least variables. The comparison between random forest and MLR showed that the predictions of the random forest model showed a better fit with the observed tree-ring values than MLR from 1989 to 2018. The predicted growth of <em>L. gmelinii</em> var<em>. principis-rupprechtii</em> is better in dense sites compared to sparse sites. During summer drought years, random forest performs well to predict tree growth in densely distributed sites. Our results highlighted the usage of optimized variable selection method combined with the random forest model to predict drought-year growth over the dense sites. Our study is crucial to predict drought-year carbon sink of planted larch forests under different climate changes scenarios in the future.</p></div>\",\"PeriodicalId\":12350,\"journal\":{\"name\":\"Forest Ecology and Management\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.7000,\"publicationDate\":\"2024-07-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Forest Ecology and Management\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0378112724004717\",\"RegionNum\":2,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"FORESTRY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Forest Ecology and Management","FirstCategoryId":"97","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0378112724004717","RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"FORESTRY","Score":null,"Total":0}
Optimizing variables selection of random forest to predict radial growth of Larix gmelinii var. principis-rupprechtii in temperate regions
Drought induced great tree growth declines and high mortality, leading to high uncertainty in carbon storage estimation. The influences of droughts on tree growth had been extensively explored, however, how to predict tree growth during drought years to reduce uncertainty in carbon storage prediction is still challenging. We utilized a combined approach of random forest importance assessment and the "VSURF" package in R software to optimize the variable selection, and then used the selected variables in random forest and multiple linear regression (MLR) method to predict the tree growth based on 132 monthly climate variables and tree-ring network consisting of 1198 Larix gmelinii var. principis-rupprechtii trees from 48 sites. Forty-three out of 132 variables were selected if the random forest importance assessment was only used to selected climate variable, however, twelve important variables were identified by optimized variable selection, which further improve model efficiency with the least variables. The comparison between random forest and MLR showed that the predictions of the random forest model showed a better fit with the observed tree-ring values than MLR from 1989 to 2018. The predicted growth of L. gmelinii var. principis-rupprechtii is better in dense sites compared to sparse sites. During summer drought years, random forest performs well to predict tree growth in densely distributed sites. Our results highlighted the usage of optimized variable selection method combined with the random forest model to predict drought-year growth over the dense sites. Our study is crucial to predict drought-year carbon sink of planted larch forests under different climate changes scenarios in the future.
期刊介绍:
Forest Ecology and Management publishes scientific articles linking forest ecology with forest management, focusing on the application of biological, ecological and social knowledge to the management and conservation of plantations and natural forests. The scope of the journal includes all forest ecosystems of the world.
A peer-review process ensures the quality and international interest of the manuscripts accepted for publication. The journal encourages communication between scientists in disparate fields who share a common interest in ecology and forest management, bridging the gap between research workers and forest managers.
We encourage submission of papers that will have the strongest interest and value to the Journal''s international readership. Some key features of papers with strong interest include:
1. Clear connections between the ecology and management of forests;
2. Novel ideas or approaches to important challenges in forest ecology and management;
3. Studies that address a population of interest beyond the scale of single research sites, Three key points in the design of forest experiments, Forest Ecology and Management 255 (2008) 2022-2023);
4. Review Articles on timely, important topics. Authors are welcome to contact one of the editors to discuss the suitability of a potential review manuscript.
The Journal encourages proposals for special issues examining important areas of forest ecology and management. Potential guest editors should contact any of the Editors to begin discussions about topics, potential papers, and other details.