和 Paraglaciecola algarum sp.nov.,并将 Pseudoalteromonas elyakovii、Pseudoalteromonas flavipulchra 和 Pseudoalteromonas profundi 重新分类为 P. distincta、P. maricaloris 和 P. gelatinilytica 的异型同义词。

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-08-01 DOI:10.1099/ijsem.0.006491
Hülya Bayburt, Byeong Jun Choi, Jeong Min Kim, Ju Hye Baek, Che Ok Jeon
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As major fatty acids (> 5%), strain G1-22<sup>T</sup> contained C<sub>16 : 0</sub>, summed feature 3 (C<sub>16 : 1</sub> <i>ω</i>7<i>c</i> and/or C<sub>16 : 1</sub> <i>ω</i>6<i>c</i>), summed feature 8 (C<sub>18 : 1</sub> <i>ω</i>7<i>c</i> and/or C<sub>18 : 1</sub> <i>ω</i>6<i>c</i>), C<sub>12 : 1</sub> 3-OH, and C<sub>10 : 0</sub> 3-OH, while strain G1-23<sup>T</sup> contained C<sub>16 : 0</sub>, summed feature 3 (C<sub>16 : 1</sub> <i>ω</i>7<i>c</i> and/or C<sub>16 : 1</sub> <i>ω</i>6<i>c</i>), and C<sub>14 : 0</sub>. Phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol were major polar lipids in both strains. Strains G1-22<sup>T</sup> and G1-23<sup>T</sup> had DNA G+C contents of 40.2 and 38.9 mol%, respectively. Phylogenetic analyses based on 16S rRNA and genome sequences revealed that strains G1-22<sup>T</sup> and G1-23<sup>T</sup> formed distinct phylogenetic lineages within the genera <i>Psychrosphaera</i> and <i>Paraglaciecola</i>, respectively. Strain G1-22<sup>T</sup> showed closest relatedness to <i>Psychrosphaera ytuae</i> MTZ26<sup>T</sup> with 97.8% 16S rRNA gene sequence similarity, 70.2% average nucleotide identity (ANI), and a 21.5% digital DNA-DNA hybridization (dDDH) value, while strain G1-23<sup>T</sup> was most closely related to <i>Paraglaciecola aquimarina</i> KCTC 32108<sup>T</sup> with 95.6% 16S rRNA gene sequence similarity, 74.6% ANI, and a 20.1% dDDH value. Based on phenotypic and molecular characteristics, strains G1-22<sup>T</sup> and G1-23<sup>T</sup> are proposed to represent two novel species, namely <i>Psychrosphaera algicola</i> sp. nov. (type strain G1-22<sup>T</sup>=KACC 22486<sup>T</sup>=JCM 34971<sup>T</sup>) and <i>Paraglaciecola algarum</i> sp. nov. (type strain G1-23<sup>T</sup>=KACC 22490<sup>T</sup>=JCM 34972<sup>T</sup>), respectively. Additionally, based on the comparison of whole genome sequences, it is proposed that <i>Pseudoalteromonas elyakovii</i>, <i>Pseudoalteromonas flavipulchra</i>, and <i>Pseudoalteromonas profundi</i> are reclassified as later heterotypic synonyms of <i>Pseudoalteromonas distincta</i>, <i>Pseudoalteromonas maricaloris</i>, and <i>Pseudoalteromonas gelatinilytica</i>, respectively.</p>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2024-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11324256/pdf/","citationCount":"0","resultStr":"{\"title\":\"<i>Psychrosphaera algicola</i> sp. nov. and <i>Paraglaciecola algarum</i> sp. nov., and reclassification of <i>Pseudoalteromonas elyakovii</i>, <i>Pseudoalteromonas flavipulchra</i>, and <i>Pseudoalteromonas profundi</i> as later heterotypic synonyms of <i>P. distincta</i>, <i>P. maricaloris</i>, and <i>P. gelatinilytica</i>.\",\"authors\":\"Hülya Bayburt, Byeong Jun Choi, Jeong Min Kim, Ju Hye Baek, Che Ok Jeon\",\"doi\":\"10.1099/ijsem.0.006491\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Two Gram-negative, obligately aerobic, rod-shaped bacteria, strains G1-22<sup>T</sup> and G1-23<sup>T</sup>, were isolated from the phycosphere of a marine brown alga. 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引用次数: 0

摘要

从一种海洋褐藻的植球中分离出两株革兰氏阴性、需氧、杆状细菌,分别为 G1-22T 株和 G1-23T 株。两株菌株都具有过氧化氢酶和氧化酶活性。菌株 G1-22T 在 25 °C、pH 8.0 和 2.0-3.0%(w/v)NaCl 溶液条件下生长最佳,而菌株 G1-23T 则在 25 °C、pH 8.0 和 4.0% NaCl 溶液条件下生长最佳。在这两种菌株中,泛醌-8 被鉴定为唯一的异肾上腺素醌。作为主要脂肪酸(> 5%),菌株 G1-22T 含有 C16 :0、总特征 3(C16 : 1 ω7c 和/或 C16 : 1 ω6c)、总特征 8(C18 : 1 ω7c 和/或 C18 : 1 ω6c)、C12 :1 3-OH 和 C10 :0 3-OH,而菌株 G1-23T 含有 C16 :0、总特征 3(C16 : 1 ω7c 和/或 C16 : 1 ω6c)和 C14 :0.磷脂酰乙醇胺、磷脂酰甘油和二磷脂酰甘油是两种菌株的主要极性脂质。菌株 G1-22T 和 G1-23T 的 DNA G+C 含量分别为 40.2 摩尔%和 38.9 摩尔%。基于 16S rRNA 和基因组序列的系统发生分析表明,菌株 G1-22T 和 G1-23T 分别在 Psychrosphaera 属和 Paraglaciecola 属中形成了不同的系统发生系。菌株 G1-22T 与 Psychrosphaera ytuae MTZ26T 的亲缘关系最近,16S rRNA 基因序列相似度为 97.8%,平均核苷酸同一性(ANI)为 70.2%,数字 DNA-DNA 杂交(dDDH)值为 21.5%;而菌株 G1-23T 与 Paraglaciecola aquimarina KCTC 32108T 的亲缘关系最密切,16S rRNA 基因序列相似度为 95.6%,平均核苷酸同一性(ANI)为 74.6%,数字 DNA-DNA 杂交(dDDH)值为 20.1%。根据表型和分子特征,G1-22T 和 G1-23T 菌株被认为分别代表两个新物种,即 Psychrosphaera algicola sp.nov.(模式菌株 G1-22T=KACC 22486T=JCM 34971T)和 Paraglaciecola algarum sp.nov.(模式菌株 G1-23T=KACC 22490T=JCM 34972T)。此外,根据全基因组序列的比较,建议将 Pseudoalteromonas elyakovii、Pseudoalteromonas flavipulchra 和 Pseudoalteromonas profundi 分别重新分类为 Pseudoalteromonas distincta、Pseudoalteromonas maricaloris 和 Pseudoalteromonas gelatinilytica 的后期异型同义词。
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Psychrosphaera algicola sp. nov. and Paraglaciecola algarum sp. nov., and reclassification of Pseudoalteromonas elyakovii, Pseudoalteromonas flavipulchra, and Pseudoalteromonas profundi as later heterotypic synonyms of P. distincta, P. maricaloris, and P. gelatinilytica.

Two Gram-negative, obligately aerobic, rod-shaped bacteria, strains G1-22T and G1-23T, were isolated from the phycosphere of a marine brown alga. Both strains exhibited catalase- and oxidase-positive activities. Strain G1-22T displayed optimal growth at 25 °C, pH 8.0, and 2.0-3.0% (w/v) NaCl, while strain G1-23T exhibited optimal growth at 25 °C, pH 8.0, and 4.0% NaCl. Ubiquinone-8 was identified as the sole isoprenoid quinone in both strains. As major fatty acids (> 5%), strain G1-22T contained C16 : 0, summed feature 3 (C16 : 1 ω7c and/or C16 : 1 ω6c), summed feature 8 (C18 : 1 ω7c and/or C18 : 1 ω6c), C12 : 1 3-OH, and C10 : 0 3-OH, while strain G1-23T contained C16 : 0, summed feature 3 (C16 : 1 ω7c and/or C16 : 1 ω6c), and C14 : 0. Phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol were major polar lipids in both strains. Strains G1-22T and G1-23T had DNA G+C contents of 40.2 and 38.9 mol%, respectively. Phylogenetic analyses based on 16S rRNA and genome sequences revealed that strains G1-22T and G1-23T formed distinct phylogenetic lineages within the genera Psychrosphaera and Paraglaciecola, respectively. Strain G1-22T showed closest relatedness to Psychrosphaera ytuae MTZ26T with 97.8% 16S rRNA gene sequence similarity, 70.2% average nucleotide identity (ANI), and a 21.5% digital DNA-DNA hybridization (dDDH) value, while strain G1-23T was most closely related to Paraglaciecola aquimarina KCTC 32108T with 95.6% 16S rRNA gene sequence similarity, 74.6% ANI, and a 20.1% dDDH value. Based on phenotypic and molecular characteristics, strains G1-22T and G1-23T are proposed to represent two novel species, namely Psychrosphaera algicola sp. nov. (type strain G1-22T=KACC 22486T=JCM 34971T) and Paraglaciecola algarum sp. nov. (type strain G1-23T=KACC 22490T=JCM 34972T), respectively. Additionally, based on the comparison of whole genome sequences, it is proposed that Pseudoalteromonas elyakovii, Pseudoalteromonas flavipulchra, and Pseudoalteromonas profundi are reclassified as later heterotypic synonyms of Pseudoalteromonas distincta, Pseudoalteromonas maricaloris, and Pseudoalteromonas gelatinilytica, respectively.

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ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
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2.10%
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464
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