鸟类有丝分裂基因组控制区的结构和遗传信息

Pub Date : 2024-08-16 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2389920
Bin Jiang, Yu Yao, Jia Li, Jiang Zhang, Yang Sun, Shulin He
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引用次数: 0

摘要

有尾目动物的有丝分裂基因组数据不断积累,并被广泛用于系统发生分析。然而,非编码区,尤其是控制区,通常在系统发育重建中被忽略。为了揭示控制区在系统发育中的作用,我们收集了 65 个鸟纲有丝分裂基因组,并对其控制区进行了研究。我们的分析发现,属于鞘翅目和鞘蝶科的物种表现出一种茎环结构,它是由位于rrns基因(编码12S rRNA)附近的一个保守的polyC-polyG伸展区形成的。相反,polyC-polyG 区域在颧翅目中不是一个保守片段。控制区的长度和重复次数是决定控制区总长度的主要因素。此外,鸟纲中的同胞物种,尤其是大戟科的同胞物种,在其控制区也显示出类似的重复模式。总之,我们的研究描绘了鸟纲控制区的结构变异,并提出了该控制区在阐明近缘物种之间的系统发育关系方面的潜在作用。
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Structures and genetic information of control region in mitogenomes of Odonata.

Mitogenome data of Odonata is accumulating and widely used in phylogenetic analysis. However, noncoding regions, especially control region, were usually omitted from the phylogenetic reconstruction. In an effort to uncover the phylogenetic insights offered by the control region, we have amassed 65 Odonata mitogenomes and conducted an examination of their control regions. Our analysis discovered that species belonging to Anisoptera and Anisozygoptera exhibited a stem-loop structure, which was formed by a conserved polyC-polyG stretch located near the rrns gene (encoding 12S rRNA). Conversely, the polyC-polyG region was not a conserved fragment in Zygoptera. The length and number of repetitions within the control region were identified as the primary determinants of its overall length. Further, sibling species within Odonata, particularly those in the genus Euphaea, displayed similar patterns of repetition in their control region. Collectively, our research delineates the structural variations within the control region of Odonata and suggests the potential utility of this region in elucidating phylogenetic relationships among closely related species.

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