盐沼藻的 luxA 基因编码一种功能性同源二聚体荧光素酶。

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC ACS Applied Electronic Materials Pub Date : 2024-12-01 Epub Date: 2024-08-22 DOI:10.1002/prot.26739
Anna Yudenko, Sergey V Bazhenov, Vladimir A Aleksenko, Ivan M Goncharov, Oleg Semenov, Alina Remeeva, Vera V Nazarenko, Elizaveta Kuznetsova, Vadim V Fomin, Maria N Konopleva, Rahaf Al Ebrahim, Nikolai N Sluchanko, Yury Ryzhykau, Yury S Semenov, Alexander Kuklin, Ilya V Manukhov, Ivan Gushchin
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引用次数: 0

摘要

目前已知有多个发光细菌支系。它们都含有类似的lux操作子,其中包括编码异源二聚体荧光素酶的基因luxA和luxB。据推测,醛氧合反应主要由亚基LuxA催化,而LuxB则是保证复合物效率和稳定性的必要条件。最近,基因组分析发现了一部分细菌物种,它们的lux操作子被重新排列,缺乏luxB。在这里,我们展示了盐酸酵母菌(Enhygromyxa salina)退化的luxACDE操作子中的luxA基因产物在大肠杆菌体内和体外加入醛类物质时会发光。总体而言,EsLuxA 的亮度远低于来自弗氏阿里维氏菌(AfLuxAB)和光照habdus luminescens(PlLuxAB)的荧光素酶,而且在使用中链 C4-C9 醛类时最为活跃。分辨率为 2.71 Å 的 EsLuxA 晶体结构显示了 (β/α)8 TIM 桶状折叠,这是其他细菌荧光素酶的特征,而且该蛋白在溶液中优先形成二聚体。移动环残基 264-293 在哈维氏弧菌 LuxA 中形成 β 发夹或线圈,而在 EsLuxA 中则形成 α 螺旋。系统发育分析表明,EsLuxA和相关蛋白可能是细菌的原荧光素酶,产生于之前描述的发光细菌中的luxA基因复制及其向luxA和luxB的分化之前。我们的工作为开发新的细菌荧光素酶铺平了道路,这种荧光素酶具有由单一基因编码的优势。
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luxA Gene From Enhygromyxa salina Encodes a Functional Homodimeric Luciferase.

Several clades of luminescent bacteria are known currently. They all contain similar lux operons, which include the genes luxA and luxB encoding a heterodimeric luciferase. The aldehyde oxygenation reaction is presumed to be catalyzed primarily by the subunit LuxA, whereas LuxB is required for efficiency and stability of the complex. Recently, genomic analysis identified a subset of bacterial species with rearranged lux operons lacking luxB. Here, we show that the product of the luxA gene from the reduced luxACDE operon of Enhygromyxa salina is luminescent upon addition of aldehydes both in vivo in Escherichia coli and in vitro. Overall, EsLuxA is much less bright compared with luciferases from Aliivibrio fischeri (AfLuxAB) and Photorhabdus luminescens (PlLuxAB), and most active with medium-chain C4-C9 aldehydes. Crystal structure of EsLuxA determined at the resolution of 2.71 Å reveals a (β/α)8 TIM-barrel fold, characteristic for other bacterial luciferases, and the protein preferentially forms a dimer in solution. The mobile loop residues 264-293, which form a β-hairpin or a coil in Vibrio harveyi LuxA, form α-helices in EsLuxA. Phylogenetic analysis shows EsLuxA and related proteins may be bacterial protoluciferases that arose prior to duplication of the luxA gene and its speciation to luxA and luxB in the previously described luminescent bacteria. Our work paves the way for the development of new bacterial luciferases that have an advantage of being encoded by a single gene.

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