感光器鸟苷酸环化酶二聚体和催化域的异构通讯

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemistry Biochemistry Pub Date : 2024-09-03 Epub Date: 2024-08-23 DOI:10.1021/acs.biochem.4c00170
Manisha Kumari Shahu, Fabian Schuhmann, Siu Ying Wong, Ilia A Solov'yov, Karl-Wilhelm Koch
{"title":"感光器鸟苷酸环化酶二聚体和催化域的异构通讯","authors":"Manisha Kumari Shahu, Fabian Schuhmann, Siu Ying Wong, Ilia A Solov'yov, Karl-Wilhelm Koch","doi":"10.1021/acs.biochem.4c00170","DOIUrl":null,"url":null,"abstract":"<p><p>Phototransduction in vertebrate photoreceptor cells is controlled by Ca<sup>2+</sup>-dependent feedback loops involving the membrane-bound guanylate cyclase GC-E that synthesizes the second messenger guanosine-3',5'-cyclic monophosphate. Intracellular Ca<sup>2+</sup>-sensor proteins named guanylate cyclase-activating proteins (GCAPs) regulate the activity of GC-E by switching from a Ca<sup>2+</sup>-bound inhibiting state to a Ca<sup>2+</sup>-free/Mg<sup>2+</sup>-bound activating state. The gene <i>GUCY2D</i> encodes for human GC-E, and mutations in <i>GUCY2D</i> are often associated with an imbalance of Ca<sup>2+</sup> and cGMP homeostasis causing retinal disorders. Here, we investigate the Ca<sup>2+</sup>-dependent inhibition of the constitutively active GC-E mutant V902L. The inhibition is not mediated by GCAP variants but by Ca<sup>2+</sup> replacing Mg<sup>2+</sup> in the catalytic center. Distant from the cyclase catalytic domain is an α-helical domain containing a highly conserved helix-turn-helix motif. Mutating the critical amino acid position 804 from leucine to proline left the principal activation mechanism intact but resulted in a lower level of catalytic efficiency. Our experimental analysis of amino acid positions in two distant GC-E domains implied an allosteric communication pathway connecting the α-helical and the cyclase catalytic domains. A computational connectivity analysis unveiled critical differences between wildtype GC-E and the mutant V902L in the allosteric network of critical amino acid positions.</p>","PeriodicalId":28,"journal":{"name":"Biochemistry Biochemistry","volume":null,"pages":null},"PeriodicalIF":2.9000,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11375764/pdf/","citationCount":"0","resultStr":"{\"title\":\"Allosteric Communication of the Dimerization and the Catalytic Domain in Photoreceptor Guanylate Cyclase.\",\"authors\":\"Manisha Kumari Shahu, Fabian Schuhmann, Siu Ying Wong, Ilia A Solov'yov, Karl-Wilhelm Koch\",\"doi\":\"10.1021/acs.biochem.4c00170\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Phototransduction in vertebrate photoreceptor cells is controlled by Ca<sup>2+</sup>-dependent feedback loops involving the membrane-bound guanylate cyclase GC-E that synthesizes the second messenger guanosine-3',5'-cyclic monophosphate. Intracellular Ca<sup>2+</sup>-sensor proteins named guanylate cyclase-activating proteins (GCAPs) regulate the activity of GC-E by switching from a Ca<sup>2+</sup>-bound inhibiting state to a Ca<sup>2+</sup>-free/Mg<sup>2+</sup>-bound activating state. The gene <i>GUCY2D</i> encodes for human GC-E, and mutations in <i>GUCY2D</i> are often associated with an imbalance of Ca<sup>2+</sup> and cGMP homeostasis causing retinal disorders. Here, we investigate the Ca<sup>2+</sup>-dependent inhibition of the constitutively active GC-E mutant V902L. The inhibition is not mediated by GCAP variants but by Ca<sup>2+</sup> replacing Mg<sup>2+</sup> in the catalytic center. Distant from the cyclase catalytic domain is an α-helical domain containing a highly conserved helix-turn-helix motif. Mutating the critical amino acid position 804 from leucine to proline left the principal activation mechanism intact but resulted in a lower level of catalytic efficiency. Our experimental analysis of amino acid positions in two distant GC-E domains implied an allosteric communication pathway connecting the α-helical and the cyclase catalytic domains. A computational connectivity analysis unveiled critical differences between wildtype GC-E and the mutant V902L in the allosteric network of critical amino acid positions.</p>\",\"PeriodicalId\":28,\"journal\":{\"name\":\"Biochemistry Biochemistry\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2024-09-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11375764/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biochemistry Biochemistry\",\"FirstCategoryId\":\"1\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.biochem.4c00170\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/8/23 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemistry Biochemistry","FirstCategoryId":"1","ListUrlMain":"https://doi.org/10.1021/acs.biochem.4c00170","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/8/23 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

脊椎动物感光细胞中的光传导受 Ca2+ 依赖性反馈回路控制,其中涉及膜结合鸟苷酸环化酶 GC-E,它能合成第二信使鸟苷-3',5'-环状单磷酸。名为鸟苷酸环化酶激活蛋白(GCAPs)的细胞内 Ca2+ 传感蛋白通过从 Ca2+ 结合的抑制状态转换到无 Ca2+ /Mg2+ 结合的激活状态来调节 GC-E 的活性。GUCY2D 基因编码人类 GC-E,GUCY2D 基因突变通常与 Ca2+ 和 cGMP 平衡失调有关,会导致视网膜疾病。在这里,我们研究了组成型活性 GC-E 突变体 V902L 的 Ca2+ 依赖性抑制作用。这种抑制作用不是由 GCAP 变体介导的,而是由催化中心的 Ca2+ 取代 Mg2+ 介导的。与环化酶催化结构域相隔较远的是一个 α 螺旋结构域,该结构域包含一个高度保守的螺旋-转螺旋基团。将关键氨基酸位置 804 从亮氨酸突变为脯氨酸后,主要的激活机制保持不变,但催化效率却降低了。我们对两个相距较远的 GC-E 结构域的氨基酸位置进行了实验分析,这意味着存在一条连接 α 螺旋结构域和环化酶催化结构域的异位沟通途径。计算连接性分析揭示了野生型 GC-E 与突变体 V902L 在关键氨基酸位置的异构网络中的关键差异。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Allosteric Communication of the Dimerization and the Catalytic Domain in Photoreceptor Guanylate Cyclase.

Phototransduction in vertebrate photoreceptor cells is controlled by Ca2+-dependent feedback loops involving the membrane-bound guanylate cyclase GC-E that synthesizes the second messenger guanosine-3',5'-cyclic monophosphate. Intracellular Ca2+-sensor proteins named guanylate cyclase-activating proteins (GCAPs) regulate the activity of GC-E by switching from a Ca2+-bound inhibiting state to a Ca2+-free/Mg2+-bound activating state. The gene GUCY2D encodes for human GC-E, and mutations in GUCY2D are often associated with an imbalance of Ca2+ and cGMP homeostasis causing retinal disorders. Here, we investigate the Ca2+-dependent inhibition of the constitutively active GC-E mutant V902L. The inhibition is not mediated by GCAP variants but by Ca2+ replacing Mg2+ in the catalytic center. Distant from the cyclase catalytic domain is an α-helical domain containing a highly conserved helix-turn-helix motif. Mutating the critical amino acid position 804 from leucine to proline left the principal activation mechanism intact but resulted in a lower level of catalytic efficiency. Our experimental analysis of amino acid positions in two distant GC-E domains implied an allosteric communication pathway connecting the α-helical and the cyclase catalytic domains. A computational connectivity analysis unveiled critical differences between wildtype GC-E and the mutant V902L in the allosteric network of critical amino acid positions.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Biochemistry Biochemistry
Biochemistry Biochemistry 生物-生化与分子生物学
CiteScore
5.50
自引率
3.40%
发文量
336
审稿时长
1-2 weeks
期刊介绍: Biochemistry provides an international forum for publishing exceptional, rigorous, high-impact research across all of biological chemistry. This broad scope includes studies on the chemical, physical, mechanistic, and/or structural basis of biological or cell function, and encompasses the fields of chemical biology, synthetic biology, disease biology, cell biology, nucleic acid biology, neuroscience, structural biology, and biophysics. In addition to traditional Research Articles, Biochemistry also publishes Communications, Viewpoints, and Perspectives, as well as From the Bench articles that report new methods of particular interest to the biological chemistry community.
期刊最新文献
Cocrystallization of the Src-Family Kinase Hck with the ATP-Site Inhibitor A-419259 Stabilizes an Extended Activation Loop Conformation. Small Molecular Approaches for Cellular Reprogramming and Tissue Engineering: Functions as Mediators of the Cell Signaling Pathway. Human CSTF2 RNA Recognition Motif Domain Binds to a U-Rich RNA Sequence through a Multistep Binding Process. Issue Editorial Masthead Issue Publication Information
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1