解密盐诱导的 Hortaea werneckii 形态发生和功能潜力;一种从日晒盐碱地分离出来的黑色色素耐盐酵母菌

IF 2.9 3区 生物学 Q2 MYCOLOGY Fungal biology Pub Date : 2024-08-22 DOI:10.1016/j.funbio.2024.08.010
Siddhi Deelip Nadodkar , Mrunal Karande , Gandisha Masso Pawar , Aishwarya Vinayak Dhume , Avinash Sharma , Bhakti Balkrishna Salgaonkar
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引用次数: 0

摘要

从印度果阿的奈鲁尔日晒盐场获得了一种浓黑色素的耐盐酵母 GUBPC1。该分离物能耐受 0% 到 20% 的 NaCl。FE-SEM 分析显示其具有多态性,在盐浓度较高时表现出椭圆形细胞,而在盐浓度较低时则表现出丝状纺锤形。最初,细胞呈椭圆形,形状类似酵母,但在培养 15 天后,细胞逐渐变长并发生出芽,表现出各种出芽模式,从单极芽到带有环状环的双极芽,再到侧芽,最终形成丝状菌丝。根据紫外可见光谱分析,确定细胞内的黑色素为黑色素。该培养物的分子鉴定结果表明与 Hortaea werneckii 最为相似。GUBPC1 分离物表现出纤维素酶、漆酶、几丁质酶、木聚糖酶、果胶酶、淀粉酶和蛋白酶等植物聚合物降解酶活性。为进一步了解和探索其生物技术潜力,我们对其进行了全基因组测序和分析。获得的基因组大小为 26.93 Mb,有 686 个等位基因,GC 含量为 53.24 %。我们鉴定了 9383 个蛋白编码基因,并对其进行了功能注释,发现其中有 435 个 CAZyme 基因和 16 个参与次生代谢物合成的功能基因,从而为其在各种生物技术应用中的潜在价值提供了依据。
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Deciphering the salt induced morphogenesis and functional potentials of Hortaea werneckii; a black pigmented halotolerant yeast isolated from solar saltern

An intense black pigmented halotolerant yeast GUBPC1, was obtained from the solar salterns of Nerul, Goa-India. The isolate could tolerate 0 to 20 % NaCl. FE-SEM analysis revealed its polymorphic nature, exhibiting oval cells at higher salt concentrations and filamentous spindle like shapes at lower concentrations. Initially, the cells appear oval, yeast like in shape but gradually after 15 days of incubation, it becomes elongated and undergoes budding, exhibiting various budding patterns, from single polar bud to bipolar buds with annellidic ring, to lateral buds and eventually forming filamentous hyphae. The intracellular black pigment was identified as melanin based on ultraviolet–visible spectroscopy analysis. The molecular identification of the culture showed closest similarity with Hortaea werneckii. Plant polymer-degrading enzymatic activities such as cellulase, laccase, chitinase, xylanase, pectinase, amylase and protease were exhibited by the isolate GUBPC1. To further understand and explore its biotechnological potential, we performed whole-genome sequencing and analysis. The obtained genome size was 26.93 Mb with 686 contigs and a GC content of 53.24 %. We identified 9383 protein-coding genes, and their functional annotation revealed the presence of 435 CAZyme genes and 16 functional genes involved in secondary metabolite synthesis, thus providing a basis for its potential value in various biotechnological applications.

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来源期刊
Fungal biology
Fungal biology MYCOLOGY-
CiteScore
5.80
自引率
4.00%
发文量
80
审稿时长
49 days
期刊介绍: Fungal Biology publishes original contributions in all fields of basic and applied research involving fungi and fungus-like organisms (including oomycetes and slime moulds). Areas of investigation include biodeterioration, biotechnology, cell and developmental biology, ecology, evolution, genetics, geomycology, medical mycology, mutualistic interactions (including lichens and mycorrhizas), physiology, plant pathology, secondary metabolites, and taxonomy and systematics. Submissions on experimental methods are also welcomed. Priority is given to contributions likely to be of interest to a wide international audience.
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