全长抗性相关钙结合蛋白 Sorcin 的溶液 NMR 主干共振分配。

IF 0.8 4区 生物学 Q4 BIOPHYSICS Biomolecular NMR Assignments Pub Date : 2024-08-31 DOI:10.1007/s12104-024-10196-0
Kathleen Joyce Carillo, Yanan He, Qiushi Ye, Nicolas Delaeter, Yihong Chen, John Orban, Yanxin Liu
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引用次数: 0

摘要

Sorcin是一种五EF手钙结合蛋白,可赋予癌细胞多重耐药性。它通过与钙通道(如 Ryanodine 受体 2 和肉质网/内质网 Ca2+-ATP 酶)相互作用,以钙依赖的方式调节细胞的 Ca2+ 稳态。为了了解钙结合诱导的构象变化,已经测定了索氏蛋白在无钙和钙结合两种状态下的晶体结构。然而,由于其灵活性,在这些晶体结构中看不到大部分的 N 端结构域。在此,我们利用溶液核磁共振技术报告了全长 Sorcin 在无钙状态下的 1H、13C 和 15N 骨架共振分布。根据分配的骨干化学位移,我们使用 TALOS+ 和 CSI 3.0 预测了蛋白质的二级结构。我们对全长 Sorcin 的骨干共振分配为今后的核磁共振光谱研究奠定了基础,从而揭示了 Sorcin 对 Ca2+ 的感应机制。
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Solution NMR backbone resonance assignment of the full-length resistance-related calcium-binding protein Sorcin

Sorcin is a penta-EF hand calcium-binding protein that confers multidrug resistance in cancer cells. It regulates cellular Ca2+ homeostasis by interacting with calcium channels such as Ryanodine receptor 2 and Sarcoplasmic/endoplasmic reticulum Ca2+-ATPase in a calcium-dependent manner. The crystal structure of the Sorcin has been determined in both calcium-free and calcium-bound states to understand calcium-binding induced conformational change. However, due to its flexibility, most of the N-terminal domain is invisible in these crystal structures. Here we report the 1H, 13C, and 15N backbone resonance assignments of full-length Sorcin in the calcium-free state using solution NMR. The protein secondary structure was predicted based on the assigned backbone chemical shifts using TALOS+ and CSI 3.0. Our backbone resonance assignment of the full-length Sorcin provides a foundation for future NMR spectroscopic studies to uncover the mechanism of Ca2+ sensing by Sorcin.

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来源期刊
Biomolecular NMR Assignments
Biomolecular NMR Assignments 生物-光谱学
CiteScore
1.70
自引率
11.10%
发文量
59
审稿时长
6-12 weeks
期刊介绍: Biomolecular NMR Assignments provides a forum for publishing sequence-specific resonance assignments for proteins and nucleic acids as Assignment Notes. Chemical shifts for NMR-active nuclei in macromolecules contain detailed information on molecular conformation and properties. Publication of resonance assignments in Biomolecular NMR Assignments ensures that these data are deposited into a public database at BioMagResBank (BMRB; http://www.bmrb.wisc.edu/), where they are available to other researchers. Coverage includes proteins and nucleic acids; Assignment Notes are processed for rapid online publication and are published in biannual online editions in June and December.
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