神经干细胞生理学中 lathyrane 类二萜的影响:微生物转化、分子对接和动力学研究

IF 4.5 2区 医学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Bioorganic Chemistry Pub Date : 2024-08-30 DOI:10.1016/j.bioorg.2024.107769
{"title":"神经干细胞生理学中 lathyrane 类二萜的影响:微生物转化、分子对接和动力学研究","authors":"","doi":"10.1016/j.bioorg.2024.107769","DOIUrl":null,"url":null,"abstract":"<div><p>Promoting endogenous neurogenesis for brain repair is emerging as a promising strategy to mitigate the functional impairments associated with various neurological disorders characterized by neuronal death. Diterpenes featuring tigliane, ingenane, jatrophane and lathyrane skeletons, frequently found in <em>Euphorbia</em> plant species, are known protein kinase C (PKC) activators and exhibit a wide variety of pharmacological properties, including the stimulation of neurogenesis. Microbial transformation of these diterpenes represents a green and sustainable methodology that offers a hitherto little explored approach to obtaining novel derivatives and exploring structure–activity relationships. In the present study, we report the biotransformation of euphoboetirane A (<strong>4</strong>) and epoxyboetirane A (<strong>5</strong>), two lathyrane diterpenoids isolated from <em>Euphorbia boetica</em>, by <em>Mucor circinelloides</em> MC NRRL3631. Our findings revealed the production of nine biotransformation products (<strong>6</strong>–<strong>14</strong>), including jatrophane derivatives originated through an unprecedented rearrangement from the parent lathyranes. The chemical structures and absolute configurations of the new compounds were elucidated through comprehensive analysis using NMR and ECD spectroscopy, as well as MS. The study evaluated how principal metabolites and their derivatives affect TGF<em>α</em> and NRG1 release, as well as their potential to promote proliferation or differentiation in cultures of NSC isolated from the SVZ of adult mice. In order to shed some light on the mechanisms underlying the ability of <strong>12</strong> as a neurogenic compound, the interactions of selected compounds with PKC <em>δ</em>-C1B were analyzed through molecular docking and molecular dynamics. Based on these, it clearly appears that the ability of compound <strong>12</strong> to form both acceptor and donor hydrogen bonds with certain amino acid residues in the enzyme pocket leads to a higher affinity compound-PKC complex, which correlates with the observed biological activity.</p></div>","PeriodicalId":257,"journal":{"name":"Bioorganic Chemistry","volume":null,"pages":null},"PeriodicalIF":4.5000,"publicationDate":"2024-08-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0045206824006746/pdfft?md5=8b23601e3338d1261b0f5ba56011f1e2&pid=1-s2.0-S0045206824006746-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Effect of lathyrane-type diterpenoids in neural stem cell physiology: Microbial transformations, molecular docking and dynamics studies\",\"authors\":\"\",\"doi\":\"10.1016/j.bioorg.2024.107769\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Promoting endogenous neurogenesis for brain repair is emerging as a promising strategy to mitigate the functional impairments associated with various neurological disorders characterized by neuronal death. Diterpenes featuring tigliane, ingenane, jatrophane and lathyrane skeletons, frequently found in <em>Euphorbia</em> plant species, are known protein kinase C (PKC) activators and exhibit a wide variety of pharmacological properties, including the stimulation of neurogenesis. Microbial transformation of these diterpenes represents a green and sustainable methodology that offers a hitherto little explored approach to obtaining novel derivatives and exploring structure–activity relationships. In the present study, we report the biotransformation of euphoboetirane A (<strong>4</strong>) and epoxyboetirane A (<strong>5</strong>), two lathyrane diterpenoids isolated from <em>Euphorbia boetica</em>, by <em>Mucor circinelloides</em> MC NRRL3631. Our findings revealed the production of nine biotransformation products (<strong>6</strong>–<strong>14</strong>), including jatrophane derivatives originated through an unprecedented rearrangement from the parent lathyranes. The chemical structures and absolute configurations of the new compounds were elucidated through comprehensive analysis using NMR and ECD spectroscopy, as well as MS. The study evaluated how principal metabolites and their derivatives affect TGF<em>α</em> and NRG1 release, as well as their potential to promote proliferation or differentiation in cultures of NSC isolated from the SVZ of adult mice. In order to shed some light on the mechanisms underlying the ability of <strong>12</strong> as a neurogenic compound, the interactions of selected compounds with PKC <em>δ</em>-C1B were analyzed through molecular docking and molecular dynamics. Based on these, it clearly appears that the ability of compound <strong>12</strong> to form both acceptor and donor hydrogen bonds with certain amino acid residues in the enzyme pocket leads to a higher affinity compound-PKC complex, which correlates with the observed biological activity.</p></div>\",\"PeriodicalId\":257,\"journal\":{\"name\":\"Bioorganic Chemistry\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.5000,\"publicationDate\":\"2024-08-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0045206824006746/pdfft?md5=8b23601e3338d1261b0f5ba56011f1e2&pid=1-s2.0-S0045206824006746-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Bioorganic Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0045206824006746\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bioorganic Chemistry","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0045206824006746","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

促进内源性神经发生以修复大脑正在成为一种很有前途的策略,可以减轻以神经元死亡为特征的各种神经系统疾病引起的功能障碍。在大戟科植物中经常发现的以tigliane、ingenane、jatrophane和lathyrane为骨架的二萜是已知的蛋白激酶C(PKC)激活剂,具有多种药理特性,包括刺激神经发生。这些二萜的微生物转化是一种绿色、可持续的方法,为获得新型衍生物和探索结构-活性关系提供了一种迄今为止鲜有探索的途径。在本研究中,我们报告了 Mucor circinelloides MC NRRL3631 对 euphoboetirane A (4) 和 epoxyboetirane A (5) 的生物转化。我们的发现揭示了九种生物转化产物(6-14)的产生过程,其中包括通过前所未有的重排方式从母本白屈菜生成的麻风烷衍生物。通过使用 NMR 和 ECD 光谱以及 MS 进行综合分析,阐明了新化合物的化学结构和绝对构型。该研究评估了主要代谢物及其衍生物如何影响 TGFα 和 NRG1 的释放,以及它们在促进从成年小鼠室上部区域分离出来的 NSC 培养物的增殖或分化方面的潜力。为了揭示 12 作为神经源化合物的作用机制,我们通过分子对接和分子动力学分析了所选化合物与 PKC δ-C1B 的相互作用。结果表明,化合物 12 能够与酶袋中的某些氨基酸残基形成受体和供体氢键,从而形成亲和力更高的化合物-PKC 复合物,这与观察到的生物活性相关。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Effect of lathyrane-type diterpenoids in neural stem cell physiology: Microbial transformations, molecular docking and dynamics studies

Promoting endogenous neurogenesis for brain repair is emerging as a promising strategy to mitigate the functional impairments associated with various neurological disorders characterized by neuronal death. Diterpenes featuring tigliane, ingenane, jatrophane and lathyrane skeletons, frequently found in Euphorbia plant species, are known protein kinase C (PKC) activators and exhibit a wide variety of pharmacological properties, including the stimulation of neurogenesis. Microbial transformation of these diterpenes represents a green and sustainable methodology that offers a hitherto little explored approach to obtaining novel derivatives and exploring structure–activity relationships. In the present study, we report the biotransformation of euphoboetirane A (4) and epoxyboetirane A (5), two lathyrane diterpenoids isolated from Euphorbia boetica, by Mucor circinelloides MC NRRL3631. Our findings revealed the production of nine biotransformation products (614), including jatrophane derivatives originated through an unprecedented rearrangement from the parent lathyranes. The chemical structures and absolute configurations of the new compounds were elucidated through comprehensive analysis using NMR and ECD spectroscopy, as well as MS. The study evaluated how principal metabolites and their derivatives affect TGFα and NRG1 release, as well as their potential to promote proliferation or differentiation in cultures of NSC isolated from the SVZ of adult mice. In order to shed some light on the mechanisms underlying the ability of 12 as a neurogenic compound, the interactions of selected compounds with PKC δ-C1B were analyzed through molecular docking and molecular dynamics. Based on these, it clearly appears that the ability of compound 12 to form both acceptor and donor hydrogen bonds with certain amino acid residues in the enzyme pocket leads to a higher affinity compound-PKC complex, which correlates with the observed biological activity.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Bioorganic Chemistry
Bioorganic Chemistry 生物-生化与分子生物学
CiteScore
9.70
自引率
3.90%
发文量
679
审稿时长
31 days
期刊介绍: Bioorganic Chemistry publishes research that addresses biological questions at the molecular level, using organic chemistry and principles of physical organic chemistry. The scope of the journal covers a range of topics at the organic chemistry-biology interface, including: enzyme catalysis, biotransformation and enzyme inhibition; nucleic acids chemistry; medicinal chemistry; natural product chemistry, natural product synthesis and natural product biosynthesis; antimicrobial agents; lipid and peptide chemistry; biophysical chemistry; biological probes; bio-orthogonal chemistry and biomimetic chemistry. For manuscripts dealing with synthetic bioactive compounds, the Journal requires that the molecular target of the compounds described must be known, and must be demonstrated experimentally in the manuscript. For studies involving natural products, if the molecular target is unknown, some data beyond simple cell-based toxicity studies to provide insight into the mechanism of action is required. Studies supported by molecular docking are welcome, but must be supported by experimental data. The Journal does not consider manuscripts that are purely theoretical or computational in nature. The Journal publishes regular articles, short communications and reviews. Reviews are normally invited by Editors or Editorial Board members. Authors of unsolicited reviews should first contact an Editor or Editorial Board member to determine whether the proposed article is within the scope of the Journal.
期刊最新文献
Identification of novel RANKL inhibitors through in silico analysis Recent advances in the natural product analogues for the treatment of neurodegenerative diseases Impact of lipidation site on the activity of α-helical antimicrobial peptides Hyaluronan and Glucose Dual-targeting Probe: Synthesis and Application Discovery of N-Benzylpiperidinol derivatives as USP7 inhibitors against Hematology
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1