金头鲷(Sarus aurata)新型β-防御素基因的鉴定

IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Marine Biotechnology Pub Date : 2024-09-11 DOI:10.1007/s10126-024-10367-z
M. Ferez-Puche, Jhon A. Serna-Duque, Alberto Cuesta, Álvaro Sánchez-Ferrer, María Ángeles Esteban
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引用次数: 0

摘要

水产养殖中抗生素的过度使用有利于耐多药细菌的自然选择,而抗菌肽(AMPs)可能是解决这一问题的一种有前途的替代品。在远摄鱼类中研究最多的抗菌肽是鱼腥肽、肝肽和β-防御素。在这项工作中,我们在金头鲷的基因组中发现了一个新基因(defb2),该基因编码 2 型 β防御素。它的开放阅读框(192 bp)编码一种蛋白质(71 个氨基酸),经过蛋白酶裂解得到功能成熟肽(42 个氨基酸)。三个外显子和两个内含子的遗传结构以及六个特征性半胱氨酸是该蛋白家族的主要特征。在进化分析中,同源染色体显示了染色体定位的保留,所构建的系统发生树揭示了两种类型的β-防御素之间的差异,以及鲷鱼和欧洲鲈鱼之间的相似性。就其基础表达而言,β防御素 2 主要在金头鲷(Sarus aurata)的肠道、胸腺、皮肤和性腺中表达。在头肾白细胞(HKLs)中,其表达量很低,且在各种免疫活性剂的刺激下没有明显变化。然而,在注射鱼类病原体 Harveyi 弧菌 4 小时后,肝脏、头肾和血液中的表达明显下调。当感染结核病毒时,在感染后 7 天,脑中的表达下调。这些结果表明,β-防御素和肝素的表达模式可能存在互补性。需要进一步研究分析β-防御素的基因复制和表达模式,并描述其在鲷鱼和其他鳍鱼中的作用机制。
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Identification of a Novel β-Defensin Gene in Gilthead Seabream (Sparus aurata)

The excessive use of antibiotics in aquaculture favors the natural selection of multidrug-resistant bacteria, and antimicrobial peptides (AMPs) could be a promising alternative to this problem. The most studied AMPs in teleost fish are piscidins, hepcidins, and β-defensins. In this work, we have found a new gene (defb2) encoding a type 2 β-defensin in the genome of gilthead seabream, a species chosen for its economic interest in aquaculture. Its open reading frame (192 bp) encodes a protein (71 amino acids) that undergoes proteolytic cleavage to obtain the functional mature peptide (42 amino acids). The genetic structure in three exons and two introns and the six characteristic cysteines are conserved as the main signature of this protein family. In the evolutionary analysis, synteny shows a preservation of chromosomal localization and the phylogenetic tree constructed exposes the differences between both types of β-defensin as well as the similarities between seabream and European seabass. In relation to its basal expression, β-defensin 2 is mostly expressed in the intestine, thymus, skin, and gonads of the gilthead seabream (Sparus aurata). In head kidney leucoytes (HKLs), the expression was very low and did not change significantly when stimulated with various immunocompetent agents. However, the expression was significantly down-regulated in the liver, head–kidney, and blood 4 h post-injection with the fish pathogen Vibrio harveyi. When infected with nodavirus, the expression was downregulated in brain at 7 days post-infection. These results denote a possible complementarity between the expression patterns of β-defensins and hepcidins. Further studies are needed to analyze gene duplications and expression patterns of β-defensins and describe their mechanism of action in seabream and other teleost fish.

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来源期刊
Marine Biotechnology
Marine Biotechnology 工程技术-海洋与淡水生物学
CiteScore
4.80
自引率
3.30%
发文量
95
审稿时长
2 months
期刊介绍: Marine Biotechnology welcomes high-quality research papers presenting novel data on the biotechnology of aquatic organisms. The journal publishes high quality papers in the areas of molecular biology, genomics, proteomics, cell biology, and biochemistry, and particularly encourages submissions of papers related to genome biology such as linkage mapping, large-scale gene discoveries, QTL analysis, physical mapping, and comparative and functional genome analysis. Papers on technological development and marine natural products should demonstrate innovation and novel applications.
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