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Correlation and Path Analysis of Shell Morphological and Body Mass Traits in Pacific Abalone (Haliotis discus hannai). 太平洋鲍鱼壳形态与体质量性状的相关及通径分析。
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-06 DOI: 10.1007/s10126-026-10580-y
Qi Luo, Xiaolong Gao, Mo Zhang, Huiyang Huang, Miaoqin Huang, Huoqing Huang, Caihuan Ke

Body mass, the primary target in the selective breeding of aquatic mollusks, is less intuitive to assess than shell morphological traits. To improve breeding efficiency, this study used path analysis to examine the influence of shell morphological traits on body mass. Shell length (XL), width (XW), height (XH), perimeter (XP), and area (XA), along with total weight (YW) and soft body weight (YS), were measured in 2-year-old female and male Pacific abalone (Haliotis discus hannai). Correlation and path analysis were conducted with shell morphological traits (XL, XW, XH, XP, and XA) as independent variables and body mass traits (YW and YS) as dependent variables. Correlation analysis revealed significant relationships between body mass and shell morphological traits in both sexes (P < 0.05). Path analysis revealed that in females, shell perimeter (0.500), height (0.451), and length (0.212) had the strongest direct effects on total weight, whereas in males, shell area (0.611), length (0.431), and width (-0.039) were most influential. For soft body weight, shell length had the highest coefficient of determination in females (0.504), while shell area had the highest in males (0.458), indicating sex-specific differences in traits affecting body mass. Importantly, shell length was identified as a key determinant of body mass across all four multiple regression equations. These findings suggest that shell length can be directly used for rapid breeding selection on farms to efficiently identify abalones with higher body weight, thereby providing a theoretical foundation for improved germplasm resource utilization and innovative breeding strategies.

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引用次数: 0
Aquafeed Enrichment with Dictyota Dichotoma and Bacillus Coagulans: A Synergistic Strategy to Promote Growth, Immune Function, and Antioxidant Defensive Pathways in Cyprinus Carpio. 在饲料中添加双歧草和凝固芽孢杆菌:促进鲤生长、免疫功能和抗氧化防御途径的协同策略。
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-04 DOI: 10.1007/s10126-025-10567-1
Karim E A Khalil, Mohamed F Abdelghany, Mohamed M El-Nawsany, Xiaolin Meng, Mohammed A E Naiel

This study evaluated the effects of dietary supplementation with Bacillus coagulans and/or the brown macroalga Dictyota dichotoma on growth, blood biochemical indices, immune responses, redox status, and gene regulation in common carp (Cyprinus carpio). A total of 400 fingerlings (initially weighing, 3.0 ± 0.03 g) were randomly divided into 40 hapas (10 fish per hapa). These hapas were assigned into equal 8 experimental groups (each group contain five replicates). The groups included: a control (no supplementation), B. coagulans alone (2 g/kg), D. dichotoma at 2.5, 5, and 10 g/kg (D1, D2, D3), and combinations of B. coagulans (2 g/kg) with each level of D. dichotoma (BC*D1, BC*D2, BC*D3). After 8 weeks of feeding, the results indicated that the diet supplemented with 10 g/kg of D. dichotoma (D3), either alone or in combination with BC, significantly enhanced growth performance, feed conversion ratio (FCR), and feed efficiency ratio (FER). Meanwhile, the fish group fed 2 g/kg of BC showed a notable improvement in feed utilization parameters, although its impact on growth was limited. The whole-body chemical analysis results showed that either BC or D. dichotoma alone significantly increased ash content while decreasing protein and lipid levels in a dose-dependent manner. In contrast, the combined BC*D3 group significantly enhanced protein retention levels while reducing ash and lipid content. Notably, D3-fed fish showed the highest serum protein content and reduced liver enzyme activities. In contrast, BC alone significantly lowered both liver and kidney health indicators. Additionally, significant interactions between BC and D3 were observed for protein fraction levels, AST, and kidney function enzymes, with the combined BC and D3 treatment resulting in the most favorable profile. Furthermore, immunity measurements, including lysozyme, complement C3, IgM, and IgD, improved significantly with the combined supplementation of BC and a high level of D. dichotoma. Additionally, the dietary administration of both BC and 10 g/kg D. dichotoma significantly boosted antioxidant enzyme activities (glutathione peroxidase, catalase, and superoxide dismutase) while reducing MDA levels. Additionally, co-supplementation significantly upregulated hepatic expression of IL-6, IL-10, and TNF-2α. These findings highlight the synergistic potential of dietary supplementation with 2 g/kg Bacillus coagulans and 10 g/kg Dictyota dichotoma as effective functional feed additives for enhancing growth performance, immune responses, and oxidative stress resistance in common carp aquaculture.

本研究评价了饲料中添加凝固芽孢杆菌和/或褐藻双歧藻对鲤鱼生长、血液生化指标、免疫反应、氧化还原状态和基因调控的影响。选取体重3.0±0.03 g的鱼种400尾,随机分为40个群落(每群落10尾)。随机分为8个实验组(每组5个重复)。各组包括:对照组(不添加)、单独添加凝血双歧杆菌(2 g/kg)、添加2.5、5和10 g/kg的二歧杆菌(D1、D2、D3)和不同水平的二歧杆菌(BC*D1、BC*D2、BC*D3)联合使用凝血双歧杆菌(2 g/kg)。饲养8周后,结果表明:饲粮中单独或联合添加10 g/kg的双瘤丹(D3)可显著提高生长性能、饲料系数(FCR)和饲料效率(FER)。同时,添加2 g/kg BC组鱼的饲料利用参数有显著提高,但对生长的影响有限。全身化学分析结果表明,单独使用BC或D. dichotoma均能显著提高灰分含量,同时降低蛋白质和脂质水平,且呈剂量依赖性。相比之下,BC*D3联合组显著提高了蛋白质潴留水平,同时降低了灰分和脂肪含量。值得注意的是,饲喂d3的鱼血清蛋白质含量最高,肝酶活性降低。相比之下,单独使用BC可显著降低肝脏和肾脏健康指标。此外,BC和D3之间在蛋白质含量、AST和肾功能酶方面的显著相互作用被观察到,BC和D3联合治疗产生了最有利的结果。此外,免疫测量,包括溶菌酶、补体C3、IgM和IgD,在联合补充BC和高水平的D. dichotoma后显著改善。此外,饲粮中添加BC和10 g/kg D. dichotoma显著提高了抗氧化酶(谷胱甘肽过氧化物酶、过氧化氢酶和超氧化物歧化酶)活性,同时降低了MDA水平。此外,共补充可显著上调肝脏中IL-6、IL-10和TNF-2α的表达。上述结果表明,在普通鲤鱼养殖中,添加2 g/kg凝固芽孢杆菌和10 g/kg二歧藻作为有效的功能饲料添加剂,具有提高生长性能、免疫应答和抗氧化应激能力的协同效应。
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引用次数: 0
Dynamic Transcriptomic Profiling of the HPG Axis Reveals Stage-Specific Regulatory Networks Underlying Natural Sex Change in Orange-Spotted Grouper (Epinephelus coioides). HPG轴的动态转录组学分析揭示了橙斑石斑鱼(Epinephelus coioides)自然性别变化的阶段特异性调节网络。
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-02 DOI: 10.1007/s10126-026-10576-8
Cheng Peng, Fengjuan Guo, Ningwen Zhang, Jin Zhang, Yong Zhang, Shijia Hu

Protogynous sex change in teleosts involves dramatic gonadal restructuring, governed by the hypothalamic-pituitary-gonadal (HPG) axis. Here, we established the dynamic regulatory atlas of the HPG axis during natural sex change in protogynous orange-spotted grouper (Epinephelus coioides) through multi-tissue transcriptomics. Profiling hypothalamus, pituitary, and gonad tissues across ovarian, intersex, and testicular stages revealed minimal transcriptomic changes in the hypothalamus during ovarian-to-intersex transition but significant differential expression during intersex-to-testis progression. The pituitary showed pronounced activation during the intersex stage featuring fshb and cga upregulation, positioning FSH as a potential trigger of sex change. Gonadal transformation involved extensive transcriptional rewiring during sex change, with induction of male-determination genes (dmrt1, amh) and suppression of female pathways (cyp19a1a, foxl2). Weighted gene co-expression network analysis identified stage-specific modules: an intersex gonad-specific module enriched for p53 signaling and oocyte meiosis pathways may facilitate ovarian regression through apoptosis and cell-cycle arrest where hub genes kpna2 and patl2 providing mechanistic insights into ovarian atresia, while a testis-specific module enriched for nucleic acid metabolism and spermatogenesis. This integrated multi-tissue analysis reveals how HPG axis coordination drives protogynous sex change, providing a foundation for future mechanistic studies.

硬骨鱼的雌雄同体性变化涉及性腺的重组,由下丘脑-垂体-性腺(HPG)轴控制。本研究通过多组织转录组学方法,建立了原生雌斑石斑鱼(Epinephelus coioides)自然性别变化过程中HPG轴的动态调控图谱。对下丘脑、垂体和性腺组织在卵巢、阴阳人和睾丸阶段的分析显示,下丘脑在卵巢向阴阳人过渡期间的转录组变化很小,但在阴阳人向睾丸的进展过程中,转录组表达存在显著差异。在双性人阶段,垂体表现出明显的激活,fshb和cga上调,将FSH定位为性别变化的潜在触发因素。性腺转化涉及性别变化过程中广泛的转录重新布线,诱导雄性决定基因(dmrt1, amh)和抑制雌性途径(cyp19a1a, foxl2)。加权基因共表达网络分析确定了阶段特异性模块:一个富含p53信号和卵母细胞减数分裂途径的双性腺特异性模块可能通过细胞凋亡和细胞周期阻滞促进卵巢退化,其中枢纽基因kpna2和patl2提供了卵巢闭锁的机制见解,而一个富含核酸代谢和精子发生的睾丸特异性模块。这项综合的多组织分析揭示了HPG轴协调如何驱动原生性别变化,为未来的机制研究提供了基础。
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引用次数: 0
Marine Bioceramic Generation for Bone Tissue Regeneration: Sea Urchin (Echinometra mathaei) Exoskeleton-Derived Calcium Carbonate as a Precursor for Hydroxyapatite Synthesis, Incorporated into Chitosan Based-Hydrogel and 3D-Printed PCL Scaffold for Osteogenic Differentiation 用于骨组织再生的海洋生物陶瓷:海胆(Echinometra mathaei)外骨骼来源的碳酸钙作为羟基磷灰石合成的前体,结合到壳聚糖基水凝胶和3d打印PCL支架中用于成骨分化
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-29 DOI: 10.1007/s10126-025-10555-5
Sara Jamshidizadeh, Narges Amrollahi Biuki, Maaroof Zarei

The marine environment is a rich and diverse habitat, home to numerous organisms that serve as valuable sources of biological and pharmacological compounds. The skeletal structures of many marine invertebrates represent precursors for calcium phosphate (CaP) bioceramics. This study demonstrates hydroxyapatite (HA) synthesis from sea urchin (Echinometra mathaei) shell and spine, a sustainable CaCO₃ source. FTIR and XRD analysis revealed the presence of characteristic peaks associated with hydroxyapatite. SEM-EDS observations indicated that synthesis parameters determined the calcium to phosphorus ratio (Ca/P) and morphology of the derived calcium phosphate bioceramic. HA-based hydrogels play an important role in bone tissue engineering due to their high biocompatibility. The hydrogels were formulated as follows: a control group of oxidized carboxymethyl chitosan/cellulose (O-CMC/CEL), a composite group with commercial hydroxyapatite (O-CMC/CEL/HA), and two experimental composite groups containing HA synthesized from sea urchin spine (O-CMC/CEL/HA (spine-derived)) and shell (O-CMC/CEL/HA (shell-derived)). Four groups of hydrogels melded on 3D print frames to evaluate the osteogenic differentiation of human adipose-derived mesenchymal stem cells (ADSCs). SEM, FTIR, water contact angle, swelling rate, and live/dead assay results indicated that the porous composite hydrogels possessed a suitable microarchitecture, featuring appropriate pore size and interconnectivity, which promotes nutrient permeability, cell attachment, cell survival, and proliferation. Furthermore, real-time PCR analysis indicated an upregulation of key osteogenic markers in ADSCs cultured on these composites, suggesting their potential to support osteogenic differentiation. The collective in vitro evidence indicates that the O-CMC/CEL/HA (spine-derived) composite hydrogel, with its suitable physicochemical properties and positive cellular responses, represents a promising biomaterial for future bone tissue engineering studies.

Graphical Abstract

海洋环境是一个丰富多样的栖息地,是许多生物的家园,是生物和药理化合物的宝贵来源。许多海洋无脊椎动物的骨骼结构是磷酸钙(CaP)生物陶瓷的前体。这项研究证明了从海胆(Echinometra mathaei)的壳和脊椎合成羟基磷灰石(HA),这是一种可持续的CaCO₃来源。红外光谱(FTIR)和x射线衍射(XRD)分析表明,羟基磷灰石的特征峰存在。SEM-EDS观察表明,合成参数决定了衍生的磷酸钙生物陶瓷的钙磷比(Ca/P)和形貌。ha基水凝胶具有良好的生物相容性,在骨组织工程中发挥着重要的作用。水凝胶的配方如下:氧化羧甲基壳聚糖/纤维素(O-CMC/CEL)为对照组,商用羟基磷灰石(O-CMC/CEL/HA)为复合组,以海胆棘(O-CMC/CEL/HA(脊椎衍生))和壳(O-CMC/CEL/HA(壳衍生))为复合组。四组水凝胶在3D打印框架上融合,以评估人脂肪源性间充质干细胞(ADSCs)的成骨分化。扫描电镜(SEM)、红外光谱(FTIR)、水接触角、溶胀率和活/死实验结果表明,多孔复合水凝胶具有合适的微结构,具有合适的孔径和互联性,有利于营养物质的渗透、细胞的附着、细胞的存活和增殖。此外,实时PCR分析显示,在这些复合材料上培养的ADSCs中,关键成骨标志物上调,表明它们具有支持成骨分化的潜力。体外实验结果表明,O-CMC/CEL/HA(脊柱源性)复合水凝胶具有良好的物理化学性质和积极的细胞反应,是未来骨组织工程研究中有前景的生物材料。图形抽象
{"title":"Marine Bioceramic Generation for Bone Tissue Regeneration: Sea Urchin (Echinometra mathaei) Exoskeleton-Derived Calcium Carbonate as a Precursor for Hydroxyapatite Synthesis, Incorporated into Chitosan Based-Hydrogel and 3D-Printed PCL Scaffold for Osteogenic Differentiation","authors":"Sara Jamshidizadeh,&nbsp;Narges Amrollahi Biuki,&nbsp;Maaroof Zarei","doi":"10.1007/s10126-025-10555-5","DOIUrl":"10.1007/s10126-025-10555-5","url":null,"abstract":"<div><p>The marine environment is a rich and diverse habitat, home to numerous organisms that serve as valuable sources of biological and pharmacological compounds. The skeletal structures of many marine invertebrates represent precursors for calcium phosphate (CaP) bioceramics. This study demonstrates hydroxyapatite (HA) synthesis from sea urchin (<i>Echinometra mathaei</i>) shell and spine, a sustainable CaCO₃ source. FTIR and XRD analysis revealed the presence of characteristic peaks associated with hydroxyapatite. SEM-EDS observations indicated that synthesis parameters determined the calcium to phosphorus ratio (Ca/P) and morphology of the derived calcium phosphate bioceramic. HA-based hydrogels play an important role in bone tissue engineering due to their high biocompatibility. The hydrogels were formulated as follows: a control group of oxidized carboxymethyl chitosan/cellulose (O-CMC/CEL), a composite group with commercial hydroxyapatite (O-CMC/CEL/HA), and two experimental composite groups containing HA synthesized from sea urchin spine (O-CMC/CEL/HA (spine-derived)) and shell (O-CMC/CEL/HA (shell-derived)). Four groups of hydrogels melded on 3D print frames to evaluate the osteogenic differentiation of human adipose-derived mesenchymal stem cells (ADSCs). SEM, FTIR, water contact angle, swelling rate, and live/dead assay results indicated that the porous composite hydrogels possessed a suitable microarchitecture, featuring appropriate pore size and interconnectivity, which promotes nutrient permeability, cell attachment, cell survival, and proliferation. Furthermore, real-time PCR analysis indicated an upregulation of key osteogenic markers in ADSCs cultured on these composites, suggesting their potential to support osteogenic differentiation. The collective in vitro evidence indicates that the O-CMC/CEL/HA (spine-derived) composite hydrogel, with its suitable physicochemical properties and positive cellular responses, represents a promising biomaterial for future bone tissue engineering studies.</p><h3>Graphical Abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":690,"journal":{"name":"Marine Biotechnology","volume":"28 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10126-025-10555-5.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146082519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular Responses of Cold Stress Adaptation in the Red Grouper (Epinephelus Akaara): Compensatory Regulation Between FOXO and MAPK Signaling Pathways 红石斑鱼(Epinephelus Akaara)冷胁迫适应的分子响应:FOXO和MAPK信号通路之间的补偿调控。
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-28 DOI: 10.1007/s10126-026-10573-x
Bin Li, Jichun Li, Hongling Ping, Tao Zhang, Jie He, Suzhen Ran, Jianshe Zhang, Xiaolong Yin, Yingying Ye, Huilai Shi, Jiji Li

This study explores the molecular responses underlying the FOXO/MAPK signaling pathway’s regulation under cold stress in Epinephelus akaara. Using transcriptome sequencing and RT-qPCR analysis, this study elucidates how E. akaara maintains energy balance, immune function, and cellular repair through the regulation of FOXO and MAPK signaling pathways under cold stress. The results demonstrate that several genes involved in energy metabolism and cellular homeostasis regulation, including FOXO1, SGK2, and G6PC, exhibit significant temperature-dependent changes, highlighting the crucial role of these pathways in cold adaptation. The study further reveals that under the suppression of the FOXO pathway, the MAPK pathway compensatorily activates to sustain stress sensing and repair functions, illustrating a multi-pathway signal integration response. Additionally, the expression changes of heat shock proteins further support the cellular adaptation strategies to cold stress. Overall, this study offers a novel molecular perspective on understanding the cold adaptation responses in E. akaara, provides theoretical support for cold-resistant breeding and cold stress mitigation strategies, and lays the groundwork for the sustainable development of the aquaculture industry.

本研究探讨了冷胁迫下石斑鱼FOXO/MAPK信号通路调控的分子机制。本研究通过转录组测序和RT-qPCR分析,阐明了冷胁迫下赤豆如何通过调节FOXO和MAPK信号通路维持能量平衡、免疫功能和细胞修复。结果表明,参与能量代谢和细胞稳态调节的几个基因,包括FOXO1、SGK2和G6PC,表现出显著的温度依赖性变化,突出了这些途径在冷适应中的重要作用。研究进一步揭示,在FOXO通路的抑制下,MAPK通路代偿激活以维持应激感知和修复功能,说明了多通路信号整合响应。此外,热休克蛋白的表达变化进一步支持了细胞对冷胁迫的适应策略。总体而言,本研究为理解赤潮赤潮鱼的冷适应反应提供了新的分子视角,为赤潮赤潮鱼的抗寒育种和冷胁迫缓解策略提供了理论支持,并为水产养殖业的可持续发展奠定了基础。
{"title":"Molecular Responses of Cold Stress Adaptation in the Red Grouper (Epinephelus Akaara): Compensatory Regulation Between FOXO and MAPK Signaling Pathways","authors":"Bin Li,&nbsp;Jichun Li,&nbsp;Hongling Ping,&nbsp;Tao Zhang,&nbsp;Jie He,&nbsp;Suzhen Ran,&nbsp;Jianshe Zhang,&nbsp;Xiaolong Yin,&nbsp;Yingying Ye,&nbsp;Huilai Shi,&nbsp;Jiji Li","doi":"10.1007/s10126-026-10573-x","DOIUrl":"10.1007/s10126-026-10573-x","url":null,"abstract":"<div><p>This study explores the molecular responses underlying the FOXO/MAPK signaling pathway’s regulation under cold stress in <i>Epinephelus akaara</i>. Using transcriptome sequencing and RT-qPCR analysis, this study elucidates how <i>E. akaara</i> maintains energy balance, immune function, and cellular repair through the regulation of FOXO and MAPK signaling pathways under cold stress. The results demonstrate that several genes involved in energy metabolism and cellular homeostasis regulation, including <i>FOXO1</i>, <i>SGK2</i>, and <i>G6PC</i>, exhibit significant temperature-dependent changes, highlighting the crucial role of these pathways in cold adaptation. The study further reveals that under the suppression of the FOXO pathway, the MAPK pathway compensatorily activates to sustain stress sensing and repair functions, illustrating a multi-pathway signal integration response. Additionally, the expression changes of heat shock proteins further support the cellular adaptation strategies to cold stress. Overall, this study offers a novel molecular perspective on understanding the cold adaptation responses in <i>E. akaara</i>, provides theoretical support for cold-resistant breeding and cold stress mitigation strategies, and lays the groundwork for the sustainable development of the aquaculture industry.</p></div>","PeriodicalId":690,"journal":{"name":"Marine Biotechnology","volume":"28 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2026-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146058534","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Uncovering the Eyestalk-Androgenic Gland-Testis Regulatory Axis Underlying Male Sexual Development of the Giant Freshwater Prawn Macrobrachium Rosenbergii: Insights from Multi-Tissue Comparative Transcriptomics Analysis 揭示罗氏沼虾雄性性发育背后的眼柄-雄激素腺体-睾丸调节轴:来自多组织比较转录组学分析的见解
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-27 DOI: 10.1007/s10126-026-10572-y
Chunmei Ao, Yiguo Lei, Boquan Wan, Wei Wang

Although the eyestalk-androgenic gland-testis axis (ES-AG-TS axis) has been acknowledged as the core neuro-endocrine regulatory system for sex differentiation and gonad development in decapod crustaceans, the molecular regulatory networks underlying the ES-AG-TS axis remains unclear. In this study, we performed multi-tissue comparative transcriptomic analysis at different testis developmental stages of the giant freshwater prawn Macrobrachium rosenbergii. 116,892 unigenes were obtained from 27 sequencing libraries. Differential gene expression (DEG) analysis identified 7,126 to 27,532 DEGs across the eyestalk ganglia, androgenic gland and testis tissues at different stages. Functional enrichment analysis revealed that in the eyestalk ganglia, gonad inhibitory genes such as GIH were significantly down-regulated, while glucose metabolism-related pathways were markedly activated. The androgenic gland exhibited distinct regulation characteristics, with steroid hormone biosynthesis pathways showing progressive activation at later stages. In the testis tissue, metabolic patterns shifted from predominant oxidation-reduction process to protein phosphorylation. Further inter-tissue comparisons identified 19,652 and 37,075 DEGs in the comparisons of ES-vs-AG and AG-vs-TS, respectively. Based on the results of DEG analysis and functional enrichment, we propose that the calcium signaling-WNT/β-catenin pathway regulates male differentiation through the Sox9-Dmrt-IAG cascade, while the p53-MMPs-TNFα axis mediates testis development. In summary, this study demonstrates that eyestalk ablation triggers reprogramming of glucose metabolism in the eyestalk ganglia, activates the androgenic gland steroid synthesis pathway, and facilitates the timing transition of testis metabolism. These findings enhance our understanding of the ES-AG-TS regulatory axis and provide novel potential targets for sex manipulation in crustacean aquaculture.

虽然眼柄-雄激素腺体-睾丸轴(ES-AG-TS轴)已被认为是十足甲壳类动物性别分化和性腺发育的核心神经内分泌调节系统,但ES-AG-TS轴的分子调控网络尚不清楚。在本研究中,我们对罗氏沼虾(Macrobrachium rosenbergii)不同睾丸发育阶段进行了多组织比较转录组学分析。从27个测序文库中获得116,892个unigenes。差异基因表达(DEG)分析在不同阶段的眼柄神经节、雄激素腺和睾丸组织中发现了7,126至27,532个差异基因表达。功能富集分析显示,在眼柄神经节中,GIH等性腺抑制基因显著下调,糖代谢相关通路明显激活。雄激素腺表现出明显的调节特征,类固醇激素生物合成途径在后期表现出进行性激活。在睾丸组织中,代谢模式从主要的氧化还原过程转变为蛋白质磷酸化。进一步的组织间比较在ES-vs-AG和AG-vs-TS的比较中分别鉴定出19,652和37,075个deg。基于DEG分析和功能富集的结果,我们提出钙信号通路- wnt /β-catenin通路通过Sox9-Dmrt-IAG级联调控雄性分化,而p53- mmp - tnf - α轴调控睾丸发育。综上所述,本研究表明眼柄消融触发眼柄神经节糖代谢重编程,激活雄激素腺体类固醇合成途径,促进睾丸代谢的定时转换。这些发现增强了我们对ES-AG-TS调控轴的理解,并为甲壳类水产养殖中的性别操纵提供了新的潜在靶点。
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引用次数: 0
IP3K Knockdown Induces Oxidative Stress and Apoptosis in Sinonovacula constricta Under Low-Salinity 低盐条件下IP3K下调诱导缢蛏氧化应激和细胞凋亡
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-24 DOI: 10.1007/s10126-026-10570-0
Yuting Han, Geqi Gao, Kai Ye, Donghong Niu

Inositol 1,4,5-trisphosphate kinase (IP3K) is a key regulatory enzyme within the phosphatidylinositol signaling pathway, modulating downstream signal transduction via the phosphorylation of inositol trisphosphate (IP3). Our previous comparative transcriptomic analysis of the razor clam (Sinonovacula constricta) under low salinity stress revealed significant enrichment of the phosphatidylinositol pathway. In this study, we characterized the IP3K gene and employed RNA interference (RNAi) to investigate its regulatory role by assessing downstream signaling, oxidative stress, and apoptosis under low-salinity (5 ppt) in S. constricta. The results showed that IP3K has a ubiquitous expression pattern along with significant increases in its expression in the gill under low-salinity stress. IP3K knockdown led to significant decreases in phosphatidylinositol (PI) and IP3 levels, altered Ca2+ level, and also triggered accumulation of reactive oxygen species (ROS). Concurrently, inhibition of IP3K significantly reduced the activities of superoxide dismutase (SOD) and catalase (CAT), while significantly increasing the content of malondialdehyde (MDA) (P < 0.01). TUNEL staining confirmed that IP3K suppression exacerbated apoptosis in gill tissues, leading to a marked decline in cell viability. Overall, these findings demonstrate that IP3K plays an essential role in regulating oxidative stress and maintaining cellular homeostasis under low salinity conditions, providing a potential target for improving salinity tolerance in shellfish.

肌醇1,4,5-三磷酸激酶(IP3K)是磷脂酰肌醇信号通路中的关键调控酶,通过肌醇三磷酸(IP3)的磷酸化调节下游信号转导。我们之前对低盐度胁迫下的蛏子(Sinonovacula constricta)的比较转录组学分析显示,磷脂酰肌醇途径显著富集。在本研究中,我们对IP3K基因进行了表征,并采用RNA干扰(RNAi)技术,通过评估低盐度(5 ppt)条件下缢虫下游信号、氧化应激和细胞凋亡来研究其调控作用。结果表明,低盐度胁迫下,IP3K具有普遍的表达模式,其在鳃中的表达显著增加。IP3K敲低导致磷脂酰肌醇(PI)和IP3水平显著降低,Ca2+水平改变,并引发活性氧(ROS)的积累。同时,抑制IP3K显著降低了超氧化物歧化酶(SOD)和过氧化氢酶(CAT)的活性,显著增加了丙二醛(MDA)的含量(P < 0.01)。TUNEL染色证实,IP3K的抑制加重了鳃组织的凋亡,导致细胞活力明显下降。综上所述,这些发现表明IP3K在低盐度条件下调控氧化应激和维持细胞稳态中起着至关重要的作用,为提高贝类耐盐性提供了潜在的靶点。
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引用次数: 0
A ceRNA Network Mediates Salinity Adaptation Via miR-novel-3-LNC_015168-SLC17A9 Axis in Sea Cucumber ceRNA网络通过miR-novel-3-LNC_015168-SLC17A9轴介导海参的盐度适应
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-19 DOI: 10.1007/s10126-025-10538-6
Xin Wei, Junwei Chen, Yudi Zhao, Nan Li, Nanyi Wang, Tianhao Xu, Yi Yang, Yaqing Chang, Yi Tian

Sea cucumber aquaculture is a cornerstone of the mariculture industry in Liaoning Province, China, contributing significantly to both economic development and​​ coastal marine ecosystems balance. Recent frequent coastal water salinity fluctuations limited the survival, growth, and yield stability of sea cucumbers, and thus posing a challenge to the sustainable development of the sea cucumber aquaculture industry. To address this issue, this study aimed to identify the key molecular regulatory mechanisms underlying sea cucumber response to low-salt environments, thereby providing theoretical support for salt-tolerant sea cucumber breeding. Based on our previous transcriptomic sequencing data of sea cucumbers under low-salt stress, we identified a potential regulatory axis consisting of miR-novel-3 (a novel microRNA), LNC_015168 (a long non-coding RNA), and slc17a9 (a transmembrane transporter gene). Time-course qPCR demonstrated that miR-novel-3 and slc17a9 exhibited inverse expression patterns under salinity stress, peaking at 24 h. The 24 h inflection point in all three molecules highlights its critical role in low-salt acclimatization. Their reciprocal regulation over-expression of miR-novel-3 suppressed slc17a9, whereas LNC_015168 acted as a ​competitive endogenous RNA​​ (ceRNA) to sequester miR-novel-3, thereby enhancing slc17a9 expression. Bioinformatics analysis identified slc17a9 as a hydrophilic transmembrane protein with 76 phosphorylation sites, suggesting its role in ion transport. These findings highlight a ceRNA network as a pivotal mechanism for osmoregulatory plasticity in echinoderms, offering potential targets for breeding salt-tolerant sea cucumbers.

海参养殖业是中国辽宁省海水养殖业的基石,对经济发展和沿海海洋生态系统平衡都有重要贡献。近年来沿海水体盐度波动频繁,限制了海参的生存、生长和产量稳定性,对海参养殖业的可持续发展提出了挑战。针对这一问题,本研究旨在明确海参对低盐环境响应的关键分子调控机制,为耐盐海参育种提供理论支持。基于我们之前在低盐胁迫下的海参转录组测序数据,我们确定了一个潜在的调控轴,由miR-novel-3(一种新型microRNA)、LNC_015168(一种长链非编码RNA)和slc17a9(一种跨膜转运基因)组成。时间过程qPCR显示,miR-novel-3和slc17a9在盐胁迫下表现出相反的表达模式,在24 h达到峰值。这三个分子在24 h的拐点突出了其在低盐环境中的关键作用。它们相互调节miR-novel-3的过表达抑制slc17a9,而LNC_015168作为竞争性内源性RNA (ceRNA)隔离miR-novel-3,从而增强slc17a9的表达。生物信息学分析发现slc17a9是一种具有76个磷酸化位点的亲水性跨膜蛋白,提示其在离子运输中起作用。这些发现强调了ceRNA网络是棘皮动物渗透调节可塑性的关键机制,为培育耐盐海参提供了潜在的靶点。
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引用次数: 0
Effects of Vitamin C Concentration on the Growth and Development of First Instar Juvenile Chinese Horseshoe Crabs (Tachypleus tridentatus) Determined by Transcriptomic and Enzyme Activity Analyses 利用转录组学和酶活性分析测定维生素C浓度对一龄中华马蹄蟹幼蟹生长发育的影响
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-19 DOI: 10.1007/s10126-026-10569-7
Duyu Li, Mujiao Xie, Lei Luo, Xiaohai Chen, Ting Li, Xiaoyong Xie

Vitamin C (VC) is an essential micronutrient known to significantly promote growth and enhance immunity in aquatic organisms. For crustaceans, dietary VC is a critical requirement for proper development. To assess the effects of VC supplementation on juvenile Chinese horseshoe crabs (Tachypleus tridentatus), first instar juveniles were subjected to various concentrations of VC in the aquatic environment. The objectives of this study were to determine the optimal VC concentration for the growth and survival of juvenile horseshoe crabs based on experimental records; to investigate the effects of VC on their gene expression through transcriptomic analysis; and to examine the impacts of various VC concentrations by measuring enzyme activities. The experimental results showed that the optimal VC concentration for molting was 30 mg/L (medium concentration), while 90 mg/L (high concentration) was optimal for survival. The effects of VC were specifically manifested by up-regulation of cytochrome c-like and down-regulation of ATP synthase F0 subunit 6 and increased alkaline phosphatase levels, which accelerated energy absorption and promoted rational energy allocation. At moderate-to-high concentrations, VC up-regulated the expression of papain family cysteine protease and partially up-regulated β-actin, while down-regulating ribosomal protein L29 (RPL29) and rho-related proteins. This expression profile ensured the precise execution of apoptosis and cell division/differentiation. Additionally, downregulation of RPL39 by VC enhanced translation efficiency. Concurrently, up-regulation of RPLP2, protein component of the small (40 S) ribosomal subunit, and RPL35, along with elevated alkaline phosphatase levels, collectively improved cellular immunity and repair capacity. Overall, these results confirm that VC promotes the growth and development of T. tridentatus.

维生素C (VC)是一种必需的微量营养素,已知可显著促进水生生物的生长和增强免疫力。对于甲壳类动物来说,膳食VC是正常发育的关键需求。为了评估VC对中华马蹄蟹幼蟹(Tachypleus tridentatus)的影响,在水生环境中对1龄幼蟹进行了不同浓度的VC处理。本研究的目的是根据实验记录确定幼马蹄蟹生长和存活的最佳VC浓度;通过转录组学分析研究VC对其基因表达的影响;并通过测量酶活性来检验不同VC浓度的影响。实验结果表明,脱毛VC浓度为30 mg/L(中浓度),存活VC浓度为90 mg/L(高浓度)。VC的作用具体表现为上调细胞色素c样蛋白,下调ATP合成酶F0亚基6,提高碱性磷酸酶水平,加速能量吸收,促进能量合理分配。在中高浓度下,VC上调木瓜蛋白酶家族半胱氨酸蛋白酶的表达,部分上调β-肌动蛋白的表达,下调核糖体蛋白L29 (RPL29)和rho相关蛋白的表达。这种表达谱确保了细胞凋亡和细胞分裂/分化的精确执行。此外,VC下调RPL39可提高翻译效率。同时,RPLP2(小(40s)核糖体亚基的蛋白质成分)和RPL35的上调,以及碱性磷酸酶水平的升高,共同提高了细胞免疫和修复能力。综上所述,这些结果证实VC促进了三剑齿虎的生长发育。
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引用次数: 0
Exploring the Human Health Properties of Compounds Derived from Red Seaweed Using Human In Vitro Cell Line Models 利用人体体外细胞系模型探索从红海藻中提取的化合物对人体健康的影响
IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-16 DOI: 10.1007/s10126-026-10568-8
Friedel Dewulf, Ilias Semmouri, Laura Van Peteghem, Colin Janssen, Jana Asselman

Red seaweeds are increasingly recognized as rich sources of bioactive compounds with promising applications in health promotion, yet their mechanisms of action in human systems remain underexplored. This study investigates the safety and immunomodulatory potential of two red seaweed-derived compounds, R-phycoerythrin (R-PE) and floridoside, and phycobiliprotein-rich extracts from two species of red algae, Acrochaetium secundatum and Gracilaria gracilis. In vitro assays were conducted using Caco-2 intestinal epithelial cells and THP-1 macrophages. Assessed endpoints were cell viability (via a panel of three fluorescence-based assays), intracellular reactive oxygen species (ROS) levels, and cytokine secretion (interleukin-6 (IL-6) and interleukin-8 (IL-8)). Both pure compounds and the seaweed extracts exhibited minimal cytotoxicity. R-PE concentration-dependently increased both IL-6 and IL-8 secretion in THP-1 macrophages, starting at our lowest tested concentration of 3.125 µg mL-1, whereas floridoside had no detectable effect on cytokine levels. Both compounds elevated ROS production in Caco-2 cells under basal conditions at concentrations (ge) 50 µg mL-1. R-PE content in the seaweed extracts was quantified at 2022 µg g-1 wet weight (WW) for A. secundatum and 170.6 µg g-1 WW for G. gracilis. At exposed concentrations of 1000 µg mL-1, both extracts significantly increased IL-8 secretion in THP-1 macrophages, with A. secundatum inducing a stronger response (127%) compared to G. gracilis (116%) (p = 0.10). These findings suggest limited bioactivity of floridoside under the tested conditions, but support an immunostimulatory potential of R-PE and red seaweed phycobiliprotein extracts. This study emphasizes the value of investigating both isolated compounds and whole seaweed extracts, as seaweed extracts can offer a more accessible, scalable, and cost-effective alternative to purified compounds, particularly for highly abundant bioactives.

红海藻被越来越多地认为是生物活性化合物的丰富来源,在促进健康方面有前景的应用,但它们在人体系统中的作用机制仍未被充分探索。本研究研究了两种红海藻衍生化合物r -藻红蛋白苷(R-PE)和floridoside,以及两种红藻Acrochaetium secundatum和Gracilaria gracilis中富含藻胆蛋白的提取物的安全性和免疫调节潜力。体外实验采用Caco-2肠上皮细胞和THP-1巨噬细胞。评估的终点是细胞活力(通过三组基于荧光的检测)、细胞内活性氧(ROS)水平和细胞因子分泌(白细胞介素-6 (IL-6)和白细胞介素-8 (IL-8))。纯化合物和海藻提取物均表现出最小的细胞毒性。R-PE浓度依赖性地增加THP-1巨噬细胞中IL-6和IL-8的分泌,从我们最低的测试浓度3.125µg mL-1开始,而花楸苷对细胞因子水平没有可检测到的影响。在基础条件下,浓度为(ge) 50µg mL-1的两种化合物均可提高Caco-2细胞的ROS生成。海藻提取物中R-PE的定量含量分别为:A. second undatum的2022µg g-1湿重(WW)和g . gracilis的170.6µg g-1 WW。当暴露浓度为1000µg mL-1时,两种提取物均能显著增加THP-1巨噬细胞中IL-8的分泌,其中荆芥诱导的反应更强(127)%) compared to G. gracilis (116%) (p = 0.10). These findings suggest limited bioactivity of floridoside under the tested conditions, but support an immunostimulatory potential of R-PE and red seaweed phycobiliprotein extracts. This study emphasizes the value of investigating both isolated compounds and whole seaweed extracts, as seaweed extracts can offer a more accessible, scalable, and cost-effective alternative to purified compounds, particularly for highly abundant bioactives.
{"title":"Exploring the Human Health Properties of Compounds Derived from Red Seaweed Using Human In Vitro Cell Line Models","authors":"Friedel Dewulf,&nbsp;Ilias Semmouri,&nbsp;Laura Van Peteghem,&nbsp;Colin Janssen,&nbsp;Jana Asselman","doi":"10.1007/s10126-026-10568-8","DOIUrl":"10.1007/s10126-026-10568-8","url":null,"abstract":"<div><p>Red seaweeds are increasingly recognized as rich sources of bioactive compounds with promising applications in health promotion, yet their mechanisms of action in human systems remain underexplored. This study investigates the safety and immunomodulatory potential of two red seaweed-derived compounds, R-phycoerythrin (R-PE) and floridoside, and phycobiliprotein-rich extracts from two species of red algae, <i>Acrochaetium secundatum</i> and <i>Gracilaria gracilis</i>. <i>In vitro</i> assays were conducted using Caco-2 intestinal epithelial cells and THP-1 macrophages. Assessed endpoints were cell viability (via a panel of three fluorescence-based assays), intracellular reactive oxygen species (ROS) levels, and cytokine secretion (interleukin-6 (IL-6) and interleukin-8 (IL-8)). Both pure compounds and the seaweed extracts exhibited minimal cytotoxicity. R-PE concentration-dependently increased both IL-6 and IL-8 secretion in THP-1 macrophages, starting at our lowest tested concentration of 3.125 µg mL<sup>-1</sup>, whereas floridoside had no detectable effect on cytokine levels. Both compounds elevated ROS production in Caco-2 cells under basal conditions at concentrations <span>(ge)</span> 50 µg mL<sup>-1</sup>. R-PE content in the seaweed extracts was quantified at 2022 µg g<sup>-1</sup> wet weight (WW) for <i>A. secundatum</i> and 170.6 µg g<sup>-1</sup> WW for <i>G. gracilis</i>. At exposed concentrations of 1000 µg mL<sup>-1</sup>, both extracts significantly increased IL-8 secretion in THP-1 macrophages, with <i>A. secundatum</i> inducing a stronger response (127%) compared to <i>G. gracilis</i> (116%) (p = 0.10). These findings suggest limited bioactivity of floridoside under the tested conditions, but support an immunostimulatory potential of R-PE and red seaweed phycobiliprotein extracts. This study emphasizes the value of investigating both isolated compounds and whole seaweed extracts, as seaweed extracts can offer a more accessible, scalable, and cost-effective alternative to purified compounds, particularly for highly abundant bioactives.</p></div>","PeriodicalId":690,"journal":{"name":"Marine Biotechnology","volume":"28 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2026-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145982999","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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Marine Biotechnology
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