利用机器学习和夏普利加法解释(SHAP)方法评估热带大西洋长鳍金枪鱼渔场垂直环境变量的重要性

IF 1.9 2区 农林科学 Q2 FISHERIES Fisheries Oceanography Pub Date : 2024-09-09 DOI:10.1111/fog.12701
Tianjiao Zhang, Hu Guo, Liming Song, Hongchun Yuan, Hengshou Sui, Bin Li
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引用次数: 0

摘要

本研究旨在为大西洋热带海域长鳍金枪鱼(Thunnus alalunga)渔场建模寻找可靠的垂直环境变量。研究收集了 2016 年至 2019 年在大西洋公海作业的 13 艘中国延绳钓渔船的航海日志数据,并与垂直环境变量(包括溶解氧、温度和盐度)进行了匹配,这些垂直环境变量从 0 米到 500 米,深度间隔为 50 米。然后构建了四种机器学习(ML)模型:决策树(DT)、随机森林(RF)、光梯度提升(LGB)和分类提升(CGB),并在.5°×.5°、1°×1°和2°×2°网格的空间分辨率内与广义相加模型(GAM)进行比较,以找出重要特征。根据沙普利加法解释(SHAP)方法,在三种分辨率的五个 ML 模型中对每个变量的重要性进行了排序和比较。结果表明:(1) 垂直环境变量--100 米深处的温度以及 100 米和 150 米深处的溶解氧浓度--是对三种空间分辨率下所有 ML 模型贡献最大的重要特征;(2) 与 .5° × .5° 和 1° × 1° 网格的模型相比,空间分辨率为 2° × 2° 网格的模型表现出更高的准确性;(3) 在所有测试模型中,RF 模型的预测性能最好。我们的结果表明,重要的垂直环境变量在不同分辨率的 ML 模型中表现出相似的重要性,这些特定变量可用于准确预测大西洋热带海域的长鳍金枪鱼渔场。
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Evaluating the importance of vertical environmental variables for albacore fishing grounds in tropical Atlantic Ocean using machine learning and Shapley additive explanations (SHAP) approach
This study aims to find reliable vertical environmental variables for modeling the fishing grounds of albacore (Thunnus alalunga) in the tropical waters of the Atlantic Ocean. Logbook data of 13 Chinese longliners operating in the high seas of the Atlantic Ocean from 2016 to 2019 were collected and matched with vertical environmental variables including dissolved oxygen, temperature, and salinity from 0 to 500 m at 50‐m depth intervals. Then four machine learning (ML) models: decision tree (DT), random forest (RF), light gradient boosting (LGB) and categorical boosting (CGB) were constructed and compared with generalized additive models (GAMs) within spatial resolutions of .5° × .5°, 1° × 1°, and 2° × 2° grids to find the significant features. The importance of each variable was ranked and compared based on Shapley additive explanations (SHAP) approach across five ML models at three resolutions. Results showed that (1) the vertical environmental variables—temperature at the depth of 100 m and dissolved oxygen concentration at the depth of 100 and 150 m—were the significant features that contributed most to all the ML models at three spatial resolutions; (2) the models with a spatial resolution of 2° × 2° grid exhibited higher accuracy compared to the models with .5° × .5° and 1° × 1° grids; (3) the RF model had the best prediction performance among all the models tested. Our results suggested that significant vertical environmental variables showed similar importance across different ML models at different resolutions, and these specific variables can be relied upon for accurately predicting the fishing grounds of albacore in the tropical waters of the Atlantic Ocean.
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来源期刊
Fisheries Oceanography
Fisheries Oceanography 农林科学-海洋学
CiteScore
5.00
自引率
7.70%
发文量
50
审稿时长
>18 weeks
期刊介绍: The international journal of the Japanese Society for Fisheries Oceanography, Fisheries Oceanography is designed to present a forum for the exchange of information amongst fisheries scientists worldwide. Fisheries Oceanography: presents original research articles relating the production and dynamics of fish populations to the marine environment examines entire food chains - not just single species identifies mechanisms controlling abundance explores factors affecting the recruitment and abundance of fish species and all higher marine tropic levels
期刊最新文献
Issue Information Evaluating the importance of vertical environmental variables for albacore fishing grounds in tropical Atlantic Ocean using machine learning and Shapley additive explanations (SHAP) approach Climate driven response of the Iceland‐East Greenland‐Jan Mayen capelin distribution Otolith elemental composition indicates differences in the habitat use for larvae and early juveniles of Japanese jack mackerel (Trachurus japonicus) in the waters around Japan Feeding habits of splendid alfonsino Beryx splendens in the vicinity of Kuroshio, the south of Japan
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