越南红藻 Gracilaria eucheumatoides Harvey 1860(蓠科:Gracilariaceae)完整线粒体基因组的特征和系统发育分析。

Tu Van Nguyen,Thien Duc Luong,Trang Thi Le,Dae-Sung Lee,Moongeun Yoon,Keun-Yong Kim,Biet Thanh Tran,Jiyoung Woo
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摘要

海洋红藻 Gracilaria eucheumatoides 因其琼脂产量和药用活性化合物而具有重要的经济价值。本研究利用 Illumina 的新一代技术对其完整的线粒体基因组(有丝分裂基因组)进行了测序。线粒体基因组是一个 25,909 bp 的环状分子,G + C 含量为 27.21%,包括 24 个蛋白质编码基因、2 个核糖体 RNA 基因、24 个转运 RNA 基因和 1 个功能不明的开放阅读框(ORF)。基因结构和组成在 Gracilaria 内部高度保守。系统进化分析结果完全支持 G. eucheumatoides 与其他 Gracilaria 物种的密切关系,以及与 G. urvillei 的姊妹关系。此次对欧泉藻丝裂基因组的测序工作为今后海洋红藻的系统发育研究提供了重要数据。
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Characterization and phylogenetic analysis of the complete mitochondrial genome of the red alga, Gracilaria eucheumatoides Harvey 1860 (Gracilariales: Gracilariaceae) from Vietnam.
The marine red alga, Gracilaria eucheumatoides, is economically significant for its agar production and pharmacologically active compounds. This study reveals its complete mitochondrial genome (mitogenome), sequenced using Illumina's next-generation technology. The mitogenome is a 25,909 bp circular molecule with a G + C content of 27.21%, comprising 24 protein-coding genes, two ribosomal RNA genes, 24 transfer RNA genes, and one open reading frame (ORF) with an unidentified function. Both gene structure and composition are highly conserved within Gracilaria. The phylogenetic analyses fully support a close relationship of G. eucheumatoides with other Gracilaria species, as well as its sister relationship with G. urvillei. This mitogenome sequencing effort of G. eucheumatoides provides crucial data for future phylogenetic research on marine red algae.
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