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引用次数: 0
摘要
染色质是 DNA 与组蛋白组成核小体的复合物,它调节基因组的可及性,并控制转录、复制和修复,通过在开放状态和紧密状态之间动态切换作为不同参数(包括组蛋白翻译后修饰以及与染色质调节剂的相互作用)的函数。结构生物学技术(包括 X 射线晶体学、低温电子显微镜和核磁共振(NMR)光谱)的不断进步促进了染色质系统的研究,尽管其庞大的体积和动态性质带来了挑战,但仍产生了重要的功能和机理见解。在这篇综述中,我们将重点介绍魔角旋转固态核磁共振的最新应用--这种新兴技术非常适合为生物大分子组装体中的刚性和柔性区域提供原子信息--在细胞环境特有的高密度条件下,对凝聚核小体和寡核苷酸阵列中组蛋白核心和尾域的结构、构象动力学和相互作用进行详细表征。
Structural and dynamic studies of chromatin by solid-state NMR spectroscopy
Chromatin is a complex of DNA with histone proteins organized into nucleosomes that regulates genome accessibility and controls transcription, replication and repair by dynamically switching between open and compact states as a function of different parameters including histone post-translational modifications and interactions with chromatin modulators. Continuing advances in structural biology techniques including X-ray crystallography, cryo-electron microscopy and nuclear magnetic resonance (NMR) spectroscopy have facilitated studies of chromatin systems, in spite of challenges posed by their large size and dynamic nature, yielding important functional and mechanistic insights. In this review we highlight recent applications of magic angle spinning solid-state NMR – an emerging technique that is uniquely-suited toward providing atomistic information for rigid and flexible regions within biomacromolecular assemblies – to detailed characterization of structure, conformational dynamics and interactions for histone core and tail domains in condensed nucleosomes and oligonucleosome arrays mimicking chromatin at high densities characteristic of the cellular environment.
期刊介绍:
Current Opinion in Structural Biology (COSB) aims to stimulate scientifically grounded, interdisciplinary, multi-scale debate and exchange of ideas. It contains polished, concise and timely reviews and opinions, with particular emphasis on those articles published in the past two years. In addition to describing recent trends, the authors are encouraged to give their subjective opinion of the topics discussed.
In COSB, we help the reader by providing in a systematic manner:
1. The views of experts on current advances in their field in a clear and readable form.
2. Evaluations of the most interesting papers, annotated by experts, from the great wealth of original publications.
[...]
The subject of Structural Biology is divided into twelve themed sections, each of which is reviewed once a year. Each issue contains two sections, and the amount of space devoted to each section is related to its importance.
-Folding and Binding-
Nucleic acids and their protein complexes-
Macromolecular Machines-
Theory and Simulation-
Sequences and Topology-
New constructs and expression of proteins-
Membranes-
Engineering and Design-
Carbohydrate-protein interactions and glycosylation-
Biophysical and molecular biological methods-
Multi-protein assemblies in signalling-
Catalysis and Regulation