{"title":"基于数图的复合体定量理论及其在脑网络分析中的应用","authors":"Heitor Baldo","doi":"arxiv-2409.09862","DOIUrl":null,"url":null,"abstract":"In this work, we developed new mathematical methods for analyzing network\ntopology and applied these methods to the analysis of brain networks. More\nspecifically, we rigorously developed quantitative methods based on complexes\nconstructed from digraphs (digraph-based complexes), such as path complexes and\ndirected clique complexes (alternatively, we refer to these complexes as\n\"higher-order structures,\" or \"higher-order topologies,\" or \"simplicial\nstructures\"), and, in the case of directed clique complexes, also methods based\non the interrelations between the directed cliques, what we called \"directed\nhigher-order connectivities.\" This new quantitative theory for digraph-based\ncomplexes can be seen as a step towards the formalization of a \"quantitative\nsimplicial theory.\" Subsequently, we used these new methods, such as\ncharacterization measures and similarity measures for digraph-based complexes,\nto analyze the topology of digraphs derived from brain connectivity estimators,\nspecifically the estimator known as information partial directed coherence\n(iPDC), which is a multivariate estimator that can be considered a\nrepresentation of Granger causality in the frequency-domain, particularly\nestimated from electroencephalography (EEG) data from patients diagnosed with\nleft temporal lobe epilepsy, in the delta, theta and alpha frequency bands, to\ntry to find new biomarkers based on the higher-order structures and\nconnectivities of these digraphs. In particular, we attempted to answer the\nfollowing questions: How does the higher-order topology of the brain network\nchange from the pre-ictal to the ictal phase, from the ictal to the post-ictal\nphase, at each frequency band and in each cerebral hemisphere? Does the\nanalysis of higher-order structures provide new and better biomarkers for\nseizure dynamics and also for the laterality of the seizure focus than the\nusual graph theoretical analyses?","PeriodicalId":501517,"journal":{"name":"arXiv - QuanBio - Neurons and Cognition","volume":"13 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Towards a Quantitative Theory of Digraph-Based Complexes and its Applications in Brain Network Analysis\",\"authors\":\"Heitor Baldo\",\"doi\":\"arxiv-2409.09862\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In this work, we developed new mathematical methods for analyzing network\\ntopology and applied these methods to the analysis of brain networks. More\\nspecifically, we rigorously developed quantitative methods based on complexes\\nconstructed from digraphs (digraph-based complexes), such as path complexes and\\ndirected clique complexes (alternatively, we refer to these complexes as\\n\\\"higher-order structures,\\\" or \\\"higher-order topologies,\\\" or \\\"simplicial\\nstructures\\\"), and, in the case of directed clique complexes, also methods based\\non the interrelations between the directed cliques, what we called \\\"directed\\nhigher-order connectivities.\\\" This new quantitative theory for digraph-based\\ncomplexes can be seen as a step towards the formalization of a \\\"quantitative\\nsimplicial theory.\\\" Subsequently, we used these new methods, such as\\ncharacterization measures and similarity measures for digraph-based complexes,\\nto analyze the topology of digraphs derived from brain connectivity estimators,\\nspecifically the estimator known as information partial directed coherence\\n(iPDC), which is a multivariate estimator that can be considered a\\nrepresentation of Granger causality in the frequency-domain, particularly\\nestimated from electroencephalography (EEG) data from patients diagnosed with\\nleft temporal lobe epilepsy, in the delta, theta and alpha frequency bands, to\\ntry to find new biomarkers based on the higher-order structures and\\nconnectivities of these digraphs. In particular, we attempted to answer the\\nfollowing questions: How does the higher-order topology of the brain network\\nchange from the pre-ictal to the ictal phase, from the ictal to the post-ictal\\nphase, at each frequency band and in each cerebral hemisphere? Does the\\nanalysis of higher-order structures provide new and better biomarkers for\\nseizure dynamics and also for the laterality of the seizure focus than the\\nusual graph theoretical analyses?\",\"PeriodicalId\":501517,\"journal\":{\"name\":\"arXiv - QuanBio - Neurons and Cognition\",\"volume\":\"13 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-09-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Neurons and Cognition\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2409.09862\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Neurons and Cognition","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2409.09862","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Towards a Quantitative Theory of Digraph-Based Complexes and its Applications in Brain Network Analysis
In this work, we developed new mathematical methods for analyzing network
topology and applied these methods to the analysis of brain networks. More
specifically, we rigorously developed quantitative methods based on complexes
constructed from digraphs (digraph-based complexes), such as path complexes and
directed clique complexes (alternatively, we refer to these complexes as
"higher-order structures," or "higher-order topologies," or "simplicial
structures"), and, in the case of directed clique complexes, also methods based
on the interrelations between the directed cliques, what we called "directed
higher-order connectivities." This new quantitative theory for digraph-based
complexes can be seen as a step towards the formalization of a "quantitative
simplicial theory." Subsequently, we used these new methods, such as
characterization measures and similarity measures for digraph-based complexes,
to analyze the topology of digraphs derived from brain connectivity estimators,
specifically the estimator known as information partial directed coherence
(iPDC), which is a multivariate estimator that can be considered a
representation of Granger causality in the frequency-domain, particularly
estimated from electroencephalography (EEG) data from patients diagnosed with
left temporal lobe epilepsy, in the delta, theta and alpha frequency bands, to
try to find new biomarkers based on the higher-order structures and
connectivities of these digraphs. In particular, we attempted to answer the
following questions: How does the higher-order topology of the brain network
change from the pre-ictal to the ictal phase, from the ictal to the post-ictal
phase, at each frequency band and in each cerebral hemisphere? Does the
analysis of higher-order structures provide new and better biomarkers for
seizure dynamics and also for the laterality of the seizure focus than the
usual graph theoretical analyses?