从聚合物物理学的角度解读 FG-Nups 固有的无序特性。

IF 2.7 3区 生物学 Q3 CELL BIOLOGY Nucleus Pub Date : 2024-09-16 DOI:10.1080/19491034.2024.2399247
Atsushi Matsuda,Abdullah Mansour,Mohammad R K Mofrad
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摘要

核孔复合体(NPC)是调节细胞核与细胞质之间分子运输的关键通道。它允许小分子自由通过,而大分子则需要核转运受体才能穿过屏障。这种选择性通透性是由富含苯丙氨酸-甘氨酸的核多肽(FG-Nups)维持的,FG-Nups 是填充 NPC 中心通道的内在无序蛋白。FG-Nups 的无序性和柔性使传统的结构生物学技术难以对其进行空间表征。为了应对这一挑战,高分子物理学为描述 FG-Nup 的行为提供了一个宝贵的框架,将其复杂的结构简化为几个关键参数。在这篇综述中,我们将探讨高分子物理学如何利用这些参数建立 FG-Nups 模型,并讨论在各种情况下量化这些参数的实验工作,从而深入了解 FG-Nups 的构象特性。
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Deciphering the intrinsically disordered characteristics of the FG-Nups through the lens of polymer physics.
The nuclear pore complex (NPC) is a critical gateway regulating molecular transport between the nucleus and cytoplasm. It allows small molecules to pass freely, while larger molecules require nuclear transport receptors to traverse the barrier. This selective permeability is maintained by phenylalanine-glycine-rich nucleoporins (FG-Nups), intrinsically disordered proteins that fill the NPC's central channel. The disordered and flexible nature of FG-Nups complicates their spatial characterization with conventional structural biology techniques. To address this challenge, polymer physics offers a valuable framework for describing FG-Nup behavior, reducing their complex structures to a few key parameters. In this review, we explore how polymer physics models FG-Nups using these parameters and discuss experimental efforts to quantify them in various contexts, providing insights into the conformational properties of FG-Nups.
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来源期刊
Nucleus
Nucleus CELL BIOLOGY-
CiteScore
5.60
自引率
5.40%
发文量
16
审稿时长
13 weeks
期刊介绍: Nucleus is a fully open access peer-reviewed journal. All articles will (if accepted) be available for anyone to read anywhere, at any time immediately on publication. Aims & Scope: The eukaryotic cell nucleus is more than a storage organelle for genomic DNA. It is involved in critical steps of cell signaling and gene regulation, as well as the maintenance of genome stability, including DNA replication and DNA damage repair. These activities heavily depend on the spatial and temporal “functional” organization of the nucleus and its integration into the complex meshwork of cellular scaffolding. Nucleus provides a platform for presenting and discussing cutting-edge research on all aspects of biology of the cell nucleus. It brings together a multidisciplinary community of scientists working in the areas of: • Nuclear structure and dynamics • Subnuclear organelles • Chromatin organization • Nuclear transport • DNA replication and DNA damage repair • Gene expression and RNA processing • Nucleus in signaling and development Nucleus offers a variety of paper formats including: • Original Research articles • Short Reports • Reviews • Commentaries • Extra Views • Methods manuscripts.
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