将多编码器 UNet 与小波融合相结合进行脑肿瘤分割

IF 2 4区 医学 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Journal of Applied Clinical Medical Physics Pub Date : 2024-09-17 DOI:10.1002/acm2.14527
Yuheng Pan, Haohan Yong, Weijia Lu, Guoyan Li, Jia Cong
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引用次数: 0

摘要

背景和目的从多模态磁共振成像(MRI)中准确分割脑肿瘤在临床诊断和手术干预中具有重要意义,而目前的深度学习方法通过早期融合策略来应对多模态磁共振成像的情况,该策略隐含地假设模态关系是线性的,这往往会忽略模态之间的互补信息,从而对模型的性能产生负面影响。针对这一问题,我们提出了一种基于后期融合策略的多模态分割网络,它采用多个编码器和一个解码器来分割脑肿瘤。每个编码器专门处理不同的模态。值得注意的是,我们的框架包括一个基于三维离散小波变换的特征融合模块,旨在提取编码器之间的互补特征。此外,我们还引入了三维全局上下文感知模块,以捕捉肿瘤体素在高层次特征上的长程依赖性。解码器结合了融合特征和全局特征,以提高网络的分割性能。实验结果表明,我们的方法在深度神经网络中应用了多模态融合的新概念,并提供了更准确、更有前景的脑肿瘤分割,有望帮助医生进行诊断。
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Brain tumor segmentation by combining MultiEncoder UNet with wavelet fusion
Background and objectiveAccurate segmentation of brain tumors from multimodal magnetic resonance imaging (MRI) holds significant importance in clinical diagnosis and surgical intervention, while current deep learning methods cope with situations of multimodal MRI by an early fusion strategy that implicitly assumes that the modal relationships are linear, which tends to ignore the complementary information between modalities, negatively impacting the model's performance. Meanwhile, long‐range relationships between voxels cannot be captured due to the localized character of the convolution procedure.MethodAiming at this problem, we propose a multimodal segmentation network based on a late fusion strategy that employs multiple encoders and a decoder for the segmentation of brain tumors. Each encoder is specialized for processing distinct modalities. Notably, our framework includes a feature fusion module based on a 3D discrete wavelet transform aimed at extracting complementary features among the encoders. Additionally, a 3D global context‐aware module was introduced to capture the long‐range dependencies of tumor voxels at a high level of features. The decoder combines fused and global features to enhance the network's segmentation performance.ResultOur proposed model is experimented on the publicly available BraTS2018 and BraTS2021 datasets. The experimental results show competitiveness with state‐of‐the‐art methods.ConclusionThe results demonstrate that our approach applies a novel concept for multimodal fusion within deep neural networks and delivers more accurate and promising brain tumor segmentation, with the potential to assist physicians in diagnosis.
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来源期刊
CiteScore
3.60
自引率
19.00%
发文量
331
审稿时长
3 months
期刊介绍: Journal of Applied Clinical Medical Physics is an international Open Access publication dedicated to clinical medical physics. JACMP welcomes original contributions dealing with all aspects of medical physics from scientists working in the clinical medical physics around the world. JACMP accepts only online submission. JACMP will publish: -Original Contributions: Peer-reviewed, investigations that represent new and significant contributions to the field. Recommended word count: up to 7500. -Review Articles: Reviews of major areas or sub-areas in the field of clinical medical physics. These articles may be of any length and are peer reviewed. -Technical Notes: These should be no longer than 3000 words, including key references. -Letters to the Editor: Comments on papers published in JACMP or on any other matters of interest to clinical medical physics. These should not be more than 1250 (including the literature) and their publication is only based on the decision of the editor, who occasionally asks experts on the merit of the contents. -Book Reviews: The editorial office solicits Book Reviews. -Announcements of Forthcoming Meetings: The Editor may provide notice of forthcoming meetings, course offerings, and other events relevant to clinical medical physics. -Parallel Opposed Editorial: We welcome topics relevant to clinical practice and medical physics profession. The contents can be controversial debate or opposed aspects of an issue. One author argues for the position and the other against. Each side of the debate contains an opening statement up to 800 words, followed by a rebuttal up to 500 words. Readers interested in participating in this series should contact the moderator with a proposed title and a short description of the topic
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