{"title":"数据驱动的药物治疗:利用 SalpPSO 优化的 GraphSAGE 加强临床决策。","authors":"Swathi Mirthika G L,Sivakumar B,S Hemalatha","doi":"10.1080/10255842.2024.2399012","DOIUrl":null,"url":null,"abstract":"Safe drug recommendation systems play a crucial role in minimizing adverse drug reactions and enhancing patient safety. In this research, we propose an innovative approach to develop a safety drug recommendation system by integrating the Salp Swarm Optimization-based Particle Swarm Optimization (SalpPSO) with the GraphSAGE algorithm. The goal is to optimize the hyper parameters of GraphSAGE, enabling more accurate drug-drug interaction prediction and personalized drug recommendations. The research begins with data collection from real-world datasets, including MIMIC-III, Drug Bank, and ICD-9 ontology. The databases provide comprehensive and diverse clinical data related to patients, diseases, and drugs, forming the foundation of a knowledge graph. It represents drug-related entities and their relationships, such as drugs, indications, adverse effects, and drug-drug interactions. The knowledge graph's integration of patient data, disease ontology, and drug information enhances the system's accuracy to predict drug-drug interactions as well as identifying potential detrimental drug reactions. The GraphSAGE algorithm is employed as the base model for learning node embeddings in the knowledge graph. To enhance its performance, we propose the SalpPSO algorithm for hyper parameter optimization. SalpPSO combines features from Salp Swarm Optimization and Particle Swarm Optimization, offering a robust and effective optimization process. The optimized hyper parameters lead to more reliable and accurate drug recommendation system. For evaluation, the dataset is split into training and validation sets and compared the performance of the modified GraphSAGE model with SalpPSO-optimized hyper parameters to the standard models. The experimental analysis conducted in terms of various measures proves the efficiency of the proposed safe recommendation system, offering valuable for healthcare experts in making more informed and personalized drug treatment decisions for patients.","PeriodicalId":50640,"journal":{"name":"Computer Methods in Biomechanics and Biomedical Engineering","volume":null,"pages":null},"PeriodicalIF":1.7000,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Data-driven drug treatment: enhancing clinical decision-making with SalpPSO-optimized GraphSAGE.\",\"authors\":\"Swathi Mirthika G L,Sivakumar B,S Hemalatha\",\"doi\":\"10.1080/10255842.2024.2399012\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Safe drug recommendation systems play a crucial role in minimizing adverse drug reactions and enhancing patient safety. In this research, we propose an innovative approach to develop a safety drug recommendation system by integrating the Salp Swarm Optimization-based Particle Swarm Optimization (SalpPSO) with the GraphSAGE algorithm. The goal is to optimize the hyper parameters of GraphSAGE, enabling more accurate drug-drug interaction prediction and personalized drug recommendations. The research begins with data collection from real-world datasets, including MIMIC-III, Drug Bank, and ICD-9 ontology. The databases provide comprehensive and diverse clinical data related to patients, diseases, and drugs, forming the foundation of a knowledge graph. It represents drug-related entities and their relationships, such as drugs, indications, adverse effects, and drug-drug interactions. The knowledge graph's integration of patient data, disease ontology, and drug information enhances the system's accuracy to predict drug-drug interactions as well as identifying potential detrimental drug reactions. The GraphSAGE algorithm is employed as the base model for learning node embeddings in the knowledge graph. To enhance its performance, we propose the SalpPSO algorithm for hyper parameter optimization. SalpPSO combines features from Salp Swarm Optimization and Particle Swarm Optimization, offering a robust and effective optimization process. The optimized hyper parameters lead to more reliable and accurate drug recommendation system. For evaluation, the dataset is split into training and validation sets and compared the performance of the modified GraphSAGE model with SalpPSO-optimized hyper parameters to the standard models. The experimental analysis conducted in terms of various measures proves the efficiency of the proposed safe recommendation system, offering valuable for healthcare experts in making more informed and personalized drug treatment decisions for patients.\",\"PeriodicalId\":50640,\"journal\":{\"name\":\"Computer Methods in Biomechanics and Biomedical Engineering\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.7000,\"publicationDate\":\"2024-09-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer Methods in Biomechanics and Biomedical Engineering\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1080/10255842.2024.2399012\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer Methods in Biomechanics and Biomedical Engineering","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1080/10255842.2024.2399012","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Data-driven drug treatment: enhancing clinical decision-making with SalpPSO-optimized GraphSAGE.
Safe drug recommendation systems play a crucial role in minimizing adverse drug reactions and enhancing patient safety. In this research, we propose an innovative approach to develop a safety drug recommendation system by integrating the Salp Swarm Optimization-based Particle Swarm Optimization (SalpPSO) with the GraphSAGE algorithm. The goal is to optimize the hyper parameters of GraphSAGE, enabling more accurate drug-drug interaction prediction and personalized drug recommendations. The research begins with data collection from real-world datasets, including MIMIC-III, Drug Bank, and ICD-9 ontology. The databases provide comprehensive and diverse clinical data related to patients, diseases, and drugs, forming the foundation of a knowledge graph. It represents drug-related entities and their relationships, such as drugs, indications, adverse effects, and drug-drug interactions. The knowledge graph's integration of patient data, disease ontology, and drug information enhances the system's accuracy to predict drug-drug interactions as well as identifying potential detrimental drug reactions. The GraphSAGE algorithm is employed as the base model for learning node embeddings in the knowledge graph. To enhance its performance, we propose the SalpPSO algorithm for hyper parameter optimization. SalpPSO combines features from Salp Swarm Optimization and Particle Swarm Optimization, offering a robust and effective optimization process. The optimized hyper parameters lead to more reliable and accurate drug recommendation system. For evaluation, the dataset is split into training and validation sets and compared the performance of the modified GraphSAGE model with SalpPSO-optimized hyper parameters to the standard models. The experimental analysis conducted in terms of various measures proves the efficiency of the proposed safe recommendation system, offering valuable for healthcare experts in making more informed and personalized drug treatment decisions for patients.
期刊介绍:
The primary aims of Computer Methods in Biomechanics and Biomedical Engineering are to provide a means of communicating the advances being made in the areas of biomechanics and biomedical engineering and to stimulate interest in the continually emerging computer based technologies which are being applied in these multidisciplinary subjects. Computer Methods in Biomechanics and Biomedical Engineering will also provide a focus for the importance of integrating the disciplines of engineering with medical technology and clinical expertise. Such integration will have a major impact on health care in the future.