Xiaohong Li , Guoheng Huang , Lianglun Cheng , Guo Zhong , Weihuang Liu , Xuhang Chen , Muyan Cai
{"title":"利用空间邻近性知识提炼跨域视觉提示,实现组织学图像分类。","authors":"Xiaohong Li , Guoheng Huang , Lianglun Cheng , Guo Zhong , Weihuang Liu , Xuhang Chen , Muyan Cai","doi":"10.1016/j.jbi.2024.104728","DOIUrl":null,"url":null,"abstract":"<div><h3>Objective:</h3><div>Histological classification is a challenging task due to the diverse appearances, unpredictable variations, and blurry edges of histological tissues. Recently, many approaches based on large networks have achieved satisfactory performance. However, most of these methods rely heavily on substantial computational resources and large high-quality datasets, limiting their practical application. Knowledge Distillation (KD) offers a promising solution by enabling smaller networks to achieve performance comparable to that of larger networks. Nonetheless, KD is hindered by the problem of high-dimensional characteristics, which makes it difficult to capture tiny scattered features and often leads to the loss of edge feature relationships.</div></div><div><h3>Methods:</h3><div>A novel cross-domain visual prompting distillation approach is proposed, compelling the teacher network to facilitate the extraction of significant high-dimensional features into low-dimensional feature maps, thereby aiding the student network in achieving superior performance. Additionally, a dynamic learnable temperature module based on novel vector-based spatial proximity is introduced to further encourage the student to imitate the teacher.</div></div><div><h3>Results:</h3><div>Experiments conducted on widely accepted histological datasets, NCT-CRC-HE-100K and LC25000, demonstrate the effectiveness of the proposed method and validate its robustness on the popular dermoscopic dataset ISIC-2019. Compared to state-of-the-art knowledge distillation methods, the proposed method achieves better performance and greater robustness with optimal domain adaptation.</div></div><div><h3>Conclusion:</h3><div>A novel distillation architecture, termed VPSP, tailored for histological classification, is proposed. This architecture achieves superior performance with optimal domain adaptation, enhancing the clinical application of histological classification. The source code will be released at <span><span>https://github.com/xiaohongji/VPSP</span><svg><path></path></svg></span>.</div></div>","PeriodicalId":15263,"journal":{"name":"Journal of Biomedical Informatics","volume":"158 ","pages":"Article 104728"},"PeriodicalIF":4.0000,"publicationDate":"2024-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Cross-domain visual prompting with spatial proximity knowledge distillation for histological image classification\",\"authors\":\"Xiaohong Li , Guoheng Huang , Lianglun Cheng , Guo Zhong , Weihuang Liu , Xuhang Chen , Muyan Cai\",\"doi\":\"10.1016/j.jbi.2024.104728\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Objective:</h3><div>Histological classification is a challenging task due to the diverse appearances, unpredictable variations, and blurry edges of histological tissues. Recently, many approaches based on large networks have achieved satisfactory performance. However, most of these methods rely heavily on substantial computational resources and large high-quality datasets, limiting their practical application. Knowledge Distillation (KD) offers a promising solution by enabling smaller networks to achieve performance comparable to that of larger networks. Nonetheless, KD is hindered by the problem of high-dimensional characteristics, which makes it difficult to capture tiny scattered features and often leads to the loss of edge feature relationships.</div></div><div><h3>Methods:</h3><div>A novel cross-domain visual prompting distillation approach is proposed, compelling the teacher network to facilitate the extraction of significant high-dimensional features into low-dimensional feature maps, thereby aiding the student network in achieving superior performance. Additionally, a dynamic learnable temperature module based on novel vector-based spatial proximity is introduced to further encourage the student to imitate the teacher.</div></div><div><h3>Results:</h3><div>Experiments conducted on widely accepted histological datasets, NCT-CRC-HE-100K and LC25000, demonstrate the effectiveness of the proposed method and validate its robustness on the popular dermoscopic dataset ISIC-2019. Compared to state-of-the-art knowledge distillation methods, the proposed method achieves better performance and greater robustness with optimal domain adaptation.</div></div><div><h3>Conclusion:</h3><div>A novel distillation architecture, termed VPSP, tailored for histological classification, is proposed. This architecture achieves superior performance with optimal domain adaptation, enhancing the clinical application of histological classification. The source code will be released at <span><span>https://github.com/xiaohongji/VPSP</span><svg><path></path></svg></span>.</div></div>\",\"PeriodicalId\":15263,\"journal\":{\"name\":\"Journal of Biomedical Informatics\",\"volume\":\"158 \",\"pages\":\"Article 104728\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2024-09-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biomedical Informatics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1532046424001461\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biomedical Informatics","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1532046424001461","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Cross-domain visual prompting with spatial proximity knowledge distillation for histological image classification
Objective:
Histological classification is a challenging task due to the diverse appearances, unpredictable variations, and blurry edges of histological tissues. Recently, many approaches based on large networks have achieved satisfactory performance. However, most of these methods rely heavily on substantial computational resources and large high-quality datasets, limiting their practical application. Knowledge Distillation (KD) offers a promising solution by enabling smaller networks to achieve performance comparable to that of larger networks. Nonetheless, KD is hindered by the problem of high-dimensional characteristics, which makes it difficult to capture tiny scattered features and often leads to the loss of edge feature relationships.
Methods:
A novel cross-domain visual prompting distillation approach is proposed, compelling the teacher network to facilitate the extraction of significant high-dimensional features into low-dimensional feature maps, thereby aiding the student network in achieving superior performance. Additionally, a dynamic learnable temperature module based on novel vector-based spatial proximity is introduced to further encourage the student to imitate the teacher.
Results:
Experiments conducted on widely accepted histological datasets, NCT-CRC-HE-100K and LC25000, demonstrate the effectiveness of the proposed method and validate its robustness on the popular dermoscopic dataset ISIC-2019. Compared to state-of-the-art knowledge distillation methods, the proposed method achieves better performance and greater robustness with optimal domain adaptation.
Conclusion:
A novel distillation architecture, termed VPSP, tailored for histological classification, is proposed. This architecture achieves superior performance with optimal domain adaptation, enhancing the clinical application of histological classification. The source code will be released at https://github.com/xiaohongji/VPSP.
期刊介绍:
The Journal of Biomedical Informatics reflects a commitment to high-quality original research papers, reviews, and commentaries in the area of biomedical informatics methodology. Although we publish articles motivated by applications in the biomedical sciences (for example, clinical medicine, health care, population health, and translational bioinformatics), the journal emphasizes reports of new methodologies and techniques that have general applicability and that form the basis for the evolving science of biomedical informatics. Articles on medical devices; evaluations of implemented systems (including clinical trials of information technologies); or papers that provide insight into a biological process, a specific disease, or treatment options would generally be more suitable for publication in other venues. Papers on applications of signal processing and image analysis are often more suitable for biomedical engineering journals or other informatics journals, although we do publish papers that emphasize the information management and knowledge representation/modeling issues that arise in the storage and use of biological signals and images. System descriptions are welcome if they illustrate and substantiate the underlying methodology that is the principal focus of the report and an effort is made to address the generalizability and/or range of application of that methodology. Note also that, given the international nature of JBI, papers that deal with specific languages other than English, or with country-specific health systems or approaches, are acceptable for JBI only if they offer generalizable lessons that are relevant to the broad JBI readership, regardless of their country, language, culture, or health system.