调控乳腺癌 M2 巨噬细胞侵袭和迁移的基因表达预测模型:临床预后和治疗意义。

IF 1.5 4区 医学 Q4 ONCOLOGY Translational cancer research Pub Date : 2024-08-31 Epub Date: 2024-08-21 DOI:10.21037/tcr-24-29
Chengjie Jiang, Jinlei Luo, Xiaoxue Jiang, Yujie Lv, Jianwei Dou
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引用次数: 0

摘要

背景:乳腺癌(BRCA)已超过肺癌,成为女性发病率最高的恶性肿瘤。它发生在乳腺组织的恶性细胞中,在全世界都很常见。越来越多的研究表明,M2巨噬细胞对BRCA的发生和发展至关重要。这项工作的目的是建立一个与 M2 巨噬细胞入侵和迁移相关的基因预测模型,预测 BRCA 患者的预后,然后评估一些靶向治疗的疗效:基因表达总库(GEO; https://www.ncbi.nlm.nih.gov/geo/)数据库提供了GSE20685数据集,而BRCA患者的表达谱和临床细节则来自癌症基因组图谱(TCGA; https://portal.gdc.cancer.gov/)数据库。在 GSE20685 数据集中发现了与 M2 巨噬细胞相关的基因以及侵袭和迁移基因的差异表达。为了探索与预后相关的侵袭和迁移 M2 巨噬细胞基因,采用 Cox 回归和最小绝对缩小和选择算子(LASSO)回归合并了 TCGA-BRCA 数据集。GSE58812 用于外部验证。在计算出每位患者的风险评分后,通过分析免疫浸润、药物敏感性、基因突变和风险评分的富集度来检验预后模型:结果:风险评分与几种免疫细胞和常用抗肿瘤药物都有很强的相关性。结果:风险评分与几种免疫细胞和常用抗肿瘤药物都有很强的相关性,此外,还发现风险评分是 BRCA 的一个独立预后因素:我们的研究基于与侵袭和迁移相关的 M2 巨噬细胞基因,调查并验证了预测特征,这些特征可能有助于了解 BRCA 的进展和预后。
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Predictive model of gene expression regulating invasion and migration of M2 macrophages in breast cancer: clinical prognosis and therapeutic implications.

Background: Breast cancer (BRCA) has surpassed lung cancer to become the malignant tumor with the highest incidence in female population. It occurs in malignant cells in breast tissue and is common worldwide. An increasing body of research indicates that M2 macrophages are critical to the occurrence and progression of BRCA. The aim of this work is to build a predictive model of genes related to invasion and migration of M2 macrophages, forecast the prognosis of patients with BRCA, and then evaluate the efficacy of some targeted treatments.

Methods: The Gene Expression Omnibus (GEO; https://www.ncbi.nlm.nih.gov/geo/) database supplied the GSE20685 dataset, whereas the expression profile a clinical details of BRCA patients were obtained from The Cancer Genome Atlas (TCGA; https://portal.gdc.cancer.gov/) database. The genes linked to M2 macrophages and the differentially elevated genes of invasion and migration were found in GSE20685. To explore the prognosis-related invasion and migration M2 macrophage genes, the TCGA-BRCA dataset was merged with Cox regression and least absolute shrinkage and selection operator (LASSO) regression. GSE58812 was utilized for external validation. After calculating each patient's risk score, the prognostic model was examined by analyses of immune infiltration, medication sensitivity, mutation, and enrichment of the risk score.

Results: The risk score had a strong correlation with both several immune cells and popular anti-tumor medications. Additionally, it was discovered that the risk score was a separate prognostic factor for BRCA.

Conclusions: Based on invasion and migration-related M2 macrophage genes, we investigated and validated predictive characteristics in our study that may offer helpful insights into the progression and prognosis of BRCA.

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来源期刊
CiteScore
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自引率
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发文量
252
期刊介绍: Translational Cancer Research (Transl Cancer Res TCR; Print ISSN: 2218-676X; Online ISSN 2219-6803; http://tcr.amegroups.com/) is an Open Access, peer-reviewed journal, indexed in Science Citation Index Expanded (SCIE). TCR publishes laboratory studies of novel therapeutic interventions as well as clinical trials which evaluate new treatment paradigms for cancer; results of novel research investigations which bridge the laboratory and clinical settings including risk assessment, cellular and molecular characterization, prevention, detection, diagnosis and treatment of human cancers with the overall goal of improving the clinical care of cancer patients. The focus of TCR is original, peer-reviewed, science-based research that successfully advances clinical medicine toward the goal of improving patients'' quality of life. The editors and an international advisory group of scientists and clinician-scientists as well as other experts will hold TCR articles to the high-quality standards. We accept Original Articles as well as Review Articles, Editorials and Brief Articles.
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