[青蒿中 R2R3-MYB 转录因子家族成员的鉴定和表达分析]

Q3 Pharmacology, Toxicology and Pharmaceutics Zhongguo Zhongyao Zazhi Pub Date : 2024-08-01 DOI:10.19540/j.cnki.cjcmm.20240415.103
Zhan-Hu Cui, Shu-Jiao Li, Yong-Hong Man, Ming-Jie Li, Li Gu, Zhong-Yi Zhang, Meng-Zhi Li, Xian-Zhang Huang, Yu-Qing Wang
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引用次数: 0

摘要

MYB(v-myb 禽骨髓母细胞病病毒癌基因同源物)转录因子家族是高等植物转录因子中最大的一类基因,可分为四个亚家族,其中 R2R3-MYB 是最常见的亚家族类型。R2R3-MYB 转录因子广泛参与植物器官发育和次生代谢物生物合成的调控。为了研究R2R3-MYB家族转录因子在青蒿黄酮类化合物合成和腺毛发育中的作用,本研究基于青蒿全基因组数据筛选并鉴定了92个R2R3-MYB转录因子,并基于生物信息学预测了它们的潜在功能。结果表明,92个转录因子的氨基酸长度从168到547 aa不等,相对分子量从19.6 至 60.5 kDa,均为亲水蛋白。亚细胞定位分析表明,89 个 AaMYB 蛋白位于细胞核中,3 个蛋白同时位于细胞核和细胞质中。根据拟南芥R2R3-MYB家族的分类,92个A. argyi R2R3-MYB蛋白被划分为26个亚族,同一亚族内的基因结构相似。转录组表达分析结果表明,AaMYB60、AaMYB63和AaMYB86在叶片中的表达量高于在茎和根中的表达量,表明这三个转录因子主要在叶片中发挥作用。此外,通过系统进化分析,还筛选出了五个参与A. argyi黄酮类化合物生物合成或腺毛发育的候选R2R3-MYB转录因子。该研究为今后箭毒的优良品种选育和种质创新提供了重要的遗传资源。
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[Identification and expression analysis of members of R2R3-MYB transcription factors family in Artemisia argyi].

The MYB(v-myb avian myeloblastosis viral oncogene homolog) family of transcription factors is the largest class of genes among higher plant transcription factors, which can be divided into four subfamilies, with the R2R3-MYB being the most common subfamily type. R2R3-MYB transcription factors are widely involved in the regulation of organ development and secondary metabolite biosynthesis in plants. To investigate the role of R2R3-MYB family transcription factors in the synthesis of flavonoids and glandular trichome development in Artemisia argyi, this study screened and identified 92 R2R3-MYB transcription factors based on the whole genome data of A. argyi, and predicted their potential functions based on bioinformatics. The results showed that the amino acid lengths of the 92 transcription factors ranged from 168 to 547 aa, with relative molecular weights ranging from 19. 6 to 60. 5 kDa, all of which were hydrophilic proteins. Subcellular localization analysis showed that 89 AaMYB proteins were located in the nucleus, while three proteins were simultaneously located in the nucleus and cytoplasm. According to the classification of Arabidopsis R2R3-MYB family, the 92 A. argyi R2R3-MYB proteins were divided into 26 subfamilies, with similar gene structures within the same subfamily.Cis-acting element prediction results showed that light-responsive elements, methyl jasmonate elements, and abscisic acid elements were widely distributed in the promoter regions of R2R3-MYB genes. Transcriptome expression analysis results showed that the expression of AaMYB60, AaMYB63, and AaMYB86 in leaves was higher than that in stems and roots, indicating that these three transcription factors mainly function in leaves. Additionally, five candidate R2R3-MYB transcription factors involved in A. argyi flavonoid biosynthesis or glandular trichome development were selected through phylogenetic analysis. This study provides important genetic resources for the breeding of superior varieties and germplasm innovation of A. argyi in the future.

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来源期刊
Zhongguo Zhongyao Zazhi
Zhongguo Zhongyao Zazhi Pharmacology, Toxicology and Pharmaceutics-Pharmacology, Toxicology and Pharmaceutics (all)
CiteScore
1.50
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581
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