Chlorophonia sclateri (Fringillidae, Passeriformes),波多黎各 Euphonia 的完整基因组序列。

Biodiversity genomes Pub Date : 2024-01-01 Epub Date: 2024-09-06 DOI:10.56179/001c.123420
Sheylda N Diaz Mendez, Taylor Hains, Stacy Pirro, John Bates, Shannon Hackett
{"title":"Chlorophonia sclateri (Fringillidae, Passeriformes),波多黎各 Euphonia 的完整基因组序列。","authors":"Sheylda N Diaz Mendez, Taylor Hains, Stacy Pirro, John Bates, Shannon Hackett","doi":"10.56179/001c.123420","DOIUrl":null,"url":null,"abstract":"<p><p>The Puerto Rican Euphonia (<i>Chlorophonia sclateri</i>) was recognized as an endemic species in 2023 based solely on morphological differences. A brightly plumaged finch that inhabits a variety of habitats, including lowland dry, scrub forests and shade-coffee plantations (Carlo et. al 2004). To provide molecular evidence for the genetic comparison of Antillean Euphonias, we present the whole genome sequence of <i>Chlorophonia sclateri</i>. Illumina paired-end reads were assembled by a <i>de novo</i> method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28963854) and assembled genome (JBFPDU000000000).</p>","PeriodicalId":72362,"journal":{"name":"Biodiversity genomes","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11414600/pdf/","citationCount":"0","resultStr":"{\"title\":\"The Complete Genome Sequence of <i>Chlorophonia sclateri</i> (Fringillidae, Passeriformes), the Puerto Rican Euphonia.\",\"authors\":\"Sheylda N Diaz Mendez, Taylor Hains, Stacy Pirro, John Bates, Shannon Hackett\",\"doi\":\"10.56179/001c.123420\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The Puerto Rican Euphonia (<i>Chlorophonia sclateri</i>) was recognized as an endemic species in 2023 based solely on morphological differences. A brightly plumaged finch that inhabits a variety of habitats, including lowland dry, scrub forests and shade-coffee plantations (Carlo et. al 2004). To provide molecular evidence for the genetic comparison of Antillean Euphonias, we present the whole genome sequence of <i>Chlorophonia sclateri</i>. Illumina paired-end reads were assembled by a <i>de novo</i> method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28963854) and assembled genome (JBFPDU000000000).</p>\",\"PeriodicalId\":72362,\"journal\":{\"name\":\"Biodiversity genomes\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11414600/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biodiversity genomes\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.56179/001c.123420\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/9/6 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biodiversity genomes","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.56179/001c.123420","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/9/6 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

波多黎各雀形目(Chlorophonia sclateri)仅因形态差异于 2023 年被认定为特有物种。这是一种羽色鲜艳的雀鸟,栖息于各种生境,包括低地干燥灌丛森林和遮荫咖啡种植园(Carlo 等人,2004 年)。为了给安的列斯秧鸡的遗传比较提供分子证据,我们展示了 Chlorophonia sclateri 的全基因组序列。我们采用全新方法对 Illumina 成对末端读数进行了组装,然后进行了整理。原始数据和组装数据可通过 GenBank 公开获取:Sequence Read Archive (SRR28963854) 和 assembled genome (JBFPDU000000000)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
The Complete Genome Sequence of Chlorophonia sclateri (Fringillidae, Passeriformes), the Puerto Rican Euphonia.

The Puerto Rican Euphonia (Chlorophonia sclateri) was recognized as an endemic species in 2023 based solely on morphological differences. A brightly plumaged finch that inhabits a variety of habitats, including lowland dry, scrub forests and shade-coffee plantations (Carlo et. al 2004). To provide molecular evidence for the genetic comparison of Antillean Euphonias, we present the whole genome sequence of Chlorophonia sclateri. Illumina paired-end reads were assembled by a de novo method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28963854) and assembled genome (JBFPDU000000000).

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
The Complete Genome Sequences of two Species of Stegodyphus Spiders (Araneae: Eresidae) The Complete Genome Sequences of 29 Species of Ducks (Anatidae, Anseriformes). The Complete Genome Sequences of 37 Bird Species from the Ecuadorian Andes The Complete Genome Sequences of 7 Hypoplectrus species (Serranidae, Perciformes) The Complete Genome Sequence of Ajuga reptans (Lamiaceae, Lamiales), Bugleweed
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1