酵母进化史中多次独立的交叉干扰损失

IF 4 2区 生物学 Q1 GENETICS & HEREDITY PLoS Genetics Pub Date : 2024-09-26 eCollection Date: 2024-09-01 DOI:10.1371/journal.pgen.1011426
Abhishek Dutta, Fabien Dutreux, Marion Garin, Claudia Caradec, Anne Friedrich, Gauthier Brach, Pia Thiele, Maxime Gaudin, Bertrand Llorente, Joseph Schacherer
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引用次数: 0

摘要

减数分裂重组对于准确的染色体分离以及通过交叉和基因转换事件产生遗传多样性至关重要。虽然这一过程已在一些选定的模式物种中得到广泛研究,但对其特性在不同物种间如何变化的了解仍然有限。例如,在整个进化过程中,产生干扰依赖型交叉的祖先 ZMM 途径经历了多次损失,这表明交叉形成的调控存在变化。在这种情况下,我们首先描述了乳糖克鲁维酵母芽殖酵母的减数分裂重组景观和特性。然后,我们对五种芽殖酵母(Saccharomyces cerevisiae、Saccharomyces paradoxus、Lachancea kluyveri、Lachancea waltii和K. lactis)在577次减数分裂过程中发生的29151个重组事件(19212个CO和9939个NCO)进行了全面分析。最终,我们发现酵母菌的重组率高于非酵母菌。此外,仅在酵母菌中检测到了真正的交叉干扰和相关的交叉平衡,在失去交叉干扰的芽殖酵母菌中增加了L. kluyveri和K. lactis。最后,重组热点虽然在酵母菌内高度保守,但在酵母菌属之外并不保守。总之,这些结果凸显了芽殖酵母进化过程中重组景观和特性的巨大差异。
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Multiple independent losses of crossover interference during yeast evolutionary history.

Meiotic recombination is essential for the accurate chromosome segregation and the generation of genetic diversity through crossover and gene conversion events. Although this process has been studied extensively in a few selected model species, understanding how its properties vary across species remains limited. For instance, the ancestral ZMM pathway that generates interference-dependent crossovers has undergone multiple losses throughout evolution, suggesting variations in the regulation of crossover formation. In this context, we first characterized the meiotic recombination landscape and properties of the Kluyveromyces lactis budding yeast. We then conducted a comprehensive analysis of 29,151 recombination events (19, 212 COs and 9, 939 NCOs) spanning 577 meioses in the five budding yeast species Saccharomyces cerevisiae, Saccharomyces paradoxus, Lachancea kluyveri, Lachancea waltii and K. lactis. Eventually, we found that the Saccharomyces yeasts displayed higher recombination rates compared to the non-Saccharomyces yeasts. In addition, bona fide crossover interference and associated crossover homeostasis were detected in the Saccharomyces species only, adding L. kluyveri and K. lactis to the list of budding yeast species that lost crossover interference. Finally, recombination hotspots, although highly conserved within the Saccharomyces yeasts are not conserved beyond the Saccharomyces genus. Overall, these results highlight great variability in the recombination landscape and properties through budding yeasts evolution.

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PLoS Genetics
PLoS Genetics GENETICS & HEREDITY-
自引率
2.20%
发文量
438
期刊介绍: PLOS Genetics is run by an international Editorial Board, headed by the Editors-in-Chief, Greg Barsh (HudsonAlpha Institute of Biotechnology, and Stanford University School of Medicine) and Greg Copenhaver (The University of North Carolina at Chapel Hill). Articles published in PLOS Genetics are archived in PubMed Central and cited in PubMed.
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