从中国威海金沙滩采集的日本石斑鱼肠道内容物中分离出的纤维素降解细菌--威海玫瑰杆菌(Roseobacter weihaiensis sp.

Yu-Rui Li, Ming-Jing Zhang, Yan-Jun Yi, Xiao-Chen Wang, Dong-Mei San, Yan-Xia Zhou
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引用次数: 0

摘要

从 Nipponacmea schrenckii 的肠道内容物中分离出了一种革兰氏染色阴性、深粉红色、杆状、变形虫和纤维素降解菌株,命名为 H9T。该分离菌株能在 4-42 °C(最适温度 25 °C)、pH 值 6.5-9.0 (最适 pH 值 7.0)和 0.0-11.0% (w/v) NaCl(最适 3.0-5.0%)条件下生长。16S rRNA 基因序列的系统进化分析表明,分离物 H9T 属于玫瑰杆菌属,与胰岛玫瑰杆菌 YSTF-M11T、醋酸玫瑰杆菌 AI77T 和庞氏玫瑰杆菌 MM-7 T 相邻,其配对序列与胰岛玫瑰杆菌 YSTF-M11T 的相似度最高,达 99.1%。主要脂肪酸的总特征为 8(C18:1ω7c 和/或 C18:1ω6c;81.08%)。主要的呼吸醌是 Q-10。极性脂质包括磷脂酰胆碱、磷脂酰甘油、一种未知脂质和少量未知磷脂。菌株 H9T 的基因组长度为 5,351,685 bp,DNA G + C 含量为 59.8%。H9T菌株与近缘菌株的平均氨基酸同一性(AAI)、平均核苷酸同一性(ANI)和数字DNA杂交(dDDH)值分别为63.4-76.8%、74.7-78.8%和13.4-19.7%。根据表型、化学分类学和系统发生学数据,认为 H9T 菌株应代表玫瑰细菌属的一个新种,并将其命名为 Roseobacter weihaiensis sp.模式菌株为 H9T(= KCTC 82507 T = MCCC 1K04354T)。
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Roseobacter weihaiensis sp. nov., a cellulose-degrading bacterium isolated from intestinal content of Nipponacmea schrenckii collected from golden beach in Weihai, China.

A Gram-staining-negative, dark pink, rod-shaped, amastigote and cellulose-degrading strain, designated H9T, was isolated from intestinal contents of Nipponacmea schrenckii. The isolate was able to grow at 4-42 °C (optimum, 25 °C), at pH 6.5-9.0 (optimum, pH 7.0), and with 0.0-11.0% (w/v) NaCl (optimum, 3.0-5.0%). Phylogenetic analysis of the 16S rRNA gene sequence suggested that isolate H9T belongs to the genus Roseobacter, neighboring Roseobacter insulae YSTF-M11T, Roseobacter cerasinus AI77T and Roseobacter ponti MM-7 T, and the pairwise sequence showed the highest similarity of 99.1% to Roseobacter insulae YSTF-M11T. The major fatty acid was summed feature 8 (C18:1ω7c and/or C18:1ω6c; 81.08%). The predominant respiratory quinone was Q-10. The polar lipids consisted of phosphatidylcholine, phosphatidylglycerol, an unknown lipid, and a small amount of an unknown phospholipid. The genome of strain H9T was 5,351,685 bp in length, and the DNA G + C content was 59.8%. The average amino acid identity (AAI), average nucleotide identity (ANI), and digital DNA hybridization (dDDH) values between strain H9T and closely related strains were 63.4-76.8%, 74.7-78.8%, and 13.4-19.7%, respectively. On the basis of the phenotypic, chemical taxonomic, and phylogenetic data, it is suggested that strain H9T should represent a novel species in the genus Roseobacter, for which the name Roseobacter weihaiensis sp. nov. is proposed. The type strain is H9T (= KCTC 82507 T = MCCC 1K04354T).

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来源期刊
CiteScore
5.60
自引率
11.50%
发文量
104
审稿时长
3 months
期刊介绍: Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.
期刊最新文献
Involvement of adhesins (EcpD, FdeC, FimH) expressed in mammary pathogenic Escherichia coli on adhesion to bovine mammary epithelial cells. Aquibaculum sediminis sp. nov., a halotolerant bacteria isolated from salt lake sediment. Roseobacter weihaiensis sp. nov., a cellulose-degrading bacterium isolated from intestinal content of Nipponacmea schrenckii collected from golden beach in Weihai, China. Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea. Acidisoma cladoniae sp. nov., an acidotolerant bacterium isolated from an Antarctic lichen.
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