泛癌症综合分析发现表皮生长因子受体是多种肿瘤类型的潜在生物标记物

IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Applied Biochemistry and Biotechnology Pub Date : 2024-10-01 DOI:10.1007/s12010-024-05060-9
Shichao Liu, Muzhi Li, YiTong Liu, RenYi Geng, Jing Ji, Rui Zhang
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引用次数: 0

摘要

表皮生长因子受体(EGFR)在各种恶性肿瘤的发生和发展过程中起着至关重要的作用,已被广泛研究。在这项全面的泛癌症分析中,我们研究了表皮生长因子受体作为多种肿瘤类型生物标记物的潜力;利用 cBioPortal 和其他工具对表皮生长因子受体基因突变和拷贝数变异进行了全面分析。利用癌症基因组图谱(TCGA)的多组学数据集,我们分析了表皮生长因子受体在不同癌症中的表达模式、预后影响、基因突变和分子相互作用。我们的研究结果表明,在肺癌和多形性胶质母细胞瘤等几种肿瘤类型中,表皮生长因子受体经常发生失调。表皮生长因子受体的高表达始终与不良的临床预后相关,如总生存率、无病生存率和无进展生存率的降低。基因变异分析表明,表皮生长因子受体突变和拷贝数变异的频率很高,尤其是在多形性胶质母细胞瘤中。此外,我们的研究还表明表皮生长因子受体的表达与癌症相关成纤维细胞的浸润之间存在复杂的关系,这可能会导致免疫抑制性肿瘤微环境的形成。这些发现凸显了表皮生长因子受体作为预后生物标志物和治疗靶点的临床意义,强调了进一步研究和开发靶向疗法的必要性,以改善表皮生长因子受体改变的癌症患者的预后。表皮生长因子受体与参与细胞周期调控和有丝分裂控制的基因和蛋白的共表达网络有助于深入了解肿瘤发生的分子机制。
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Pan-cancer Comprehensive Analysis Identified EGFR as a Potential Biomarker for Multiple Tumor Types.

The epidermal growth factor receptor (EGFR) has been extensively studied for its critical role in the development and progression of various malignancies. In this comprehensive pan-cancer analysis, we investigated the potential of EGFR as a biomarker across multiple tumor types; a comprehensive analysis of EGFR gene mutation and copy number variation was conducted using cBioPortal and other tools. Utilizing multi-omics datasets from The Cancer Genome Atlas (TCGA), we analyzed EGFR's expression patterns, prognostic implications, genetic mutations, and molecular interactions in different cancers. Our findings revealed frequent dysregulation of EGFR in several tumor types, including lung cancers and glioblastoma multiforme. High EGFR expression was consistently associated with poor clinical outcomes, such as reduced overall survival, disease-free survival, and progression-free survival. Genetic alteration analysis indicated a high frequency of EGFR mutations and copy number variations, particularly in glioblastoma multiforme. Additionally, our study suggests a complex relationship between EGFR expression and cancer-associated fibroblast infiltration, which may contribute to an immunosuppressive tumor microenvironment. These findings underscore the clinical relevance of EGFR as a prognostic biomarker and therapeutic target, emphasizing the need for further research and the development of targeted therapies to enhance patient outcomes in cancers with EGFR alterations. The co-expression network of EGFR with genes and proteins involved in cell cycle regulation and mitotic control provided insights into the molecular mechanisms of oncogenesis.

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来源期刊
Applied Biochemistry and Biotechnology
Applied Biochemistry and Biotechnology 工程技术-生化与分子生物学
CiteScore
5.70
自引率
6.70%
发文量
460
审稿时长
5.3 months
期刊介绍: This journal is devoted to publishing the highest quality innovative papers in the fields of biochemistry and biotechnology. The typical focus of the journal is to report applications of novel scientific and technological breakthroughs, as well as technological subjects that are still in the proof-of-concept stage. Applied Biochemistry and Biotechnology provides a forum for case studies and practical concepts of biotechnology, utilization, including controls, statistical data analysis, problem descriptions unique to a particular application, and bioprocess economic analyses. The journal publishes reviews deemed of interest to readers, as well as book reviews, meeting and symposia notices, and news items relating to biotechnology in both the industrial and academic communities. In addition, Applied Biochemistry and Biotechnology often publishes lists of patents and publications of special interest to readers.
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