通过深度学习对儿童睡眠进行分期:从成人到儿童的迁移学习法

IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL IEEE Transactions on Biomedical Engineering Pub Date : 2024-09-27 DOI:10.1109/TBME.2024.3470534
Sharon Haimov, Alissa Tabakhov, Riva Tauman, Joachim A Behar
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引用次数: 0

摘要

背景:睡眠分期对于诊断睡眠障碍至关重要。传统的临床方法需要耗费大量时间进行评分。最近,利用光动压描记图(PPG)时间序列的数据驱动算法取得了进展,有望实现成人睡眠分期的自动化。然而,对于儿童来说,算法的开发却因数据集的有限性而受到阻碍,儿童腺样体切除术试验(CHAT)是唯一的重要数据来源,其中包括 5-10 岁儿童的记录。这一限制制约了对算法泛化性能的评估:我们采用深度学习模型对 PPG 进行睡眠分期,该模型最初使用大型成人睡眠记录数据集进行训练,然后在 80% 的 CHAT 数据集(CHAT-train)上对其进行微调,以完成三类睡眠分期(清醒、快速动眼期、非快速动眼期)任务。由此产生的算法性能与相同的模型架构进行了比较,但后者是在 CHAT-train (基准)上从头开始训练的。算法在本地测试集(CHAT-test)以及新引入的独立数据集上进行了评估:我们的深度学习算法在 CHAT-test 上的科恩 Kappa 值为 0.88(相对于 0.65),在外部 Ichilov 数据集上,5 岁以上儿童的 Kappa 值为 0.72(相对于 0.64),5 岁以下儿童的 Kappa 值为 0.64(相对于 0.53):这项研究利用原始 PPG 为儿童睡眠分期任务建立了新的先进性能。研究结果凸显了从成人到儿童领域的迁移学习的价值。不过,5 岁以下儿童的表现较差,这表明需要进一步研究,并建立涵盖更广泛儿科年龄范围的额外数据集,以充分解决通用性的局限性。
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Deep Learning for Pediatric Sleep Staging from Photoplethysmography: A Transfer Learning Approach from Adults to Children.

Background: Sleep staging is critical for diagnosing sleep disorders. Traditional methods in clinical settings involve time-intensive scoring procedures. Recent advancements in data-driven algorithms using photoplethysmogram (PPG) time series have shown promise in automating sleep staging in adults. However, for children, algorithm development is hindered by the limited availability of datasets, with the Childhood Adenotonsillectomy Trial (CHAT) being the only substantial source, comprising recordings from children aged 5-10. This limitation constrains the evaluation of algorithmic generalization performance.

Methods: We employed a deep learning model for sleep staging from PPG, initially trained using a large dataset of adult sleep recordings, and fine-tuned it on 80% of the CHAT dataset (CHAT-train) for the task of three-class sleep staging (wake, REM, non-REM). The resulting algorithm performance was compared to the same model architecture but trained from scratch on CHAT-train (benchmark). The algorithms are evaluated on the local test set, denoted CHAT-test, as well as on a newly introduced independent dataset.

Results: Our deep learning algorithm achieved a Cohen's Kappa of 0.88 on CHAT-test (versus 0.65), and demonstrated generalization capabilities with a Kappa of 0.72 on the external Ichilov dataset for children above 5 years old (versus 0.64) and 0.64 for those below 5 (versus 0.53).

Significance: This research establishes a new state-of-the-art performance for the task of sleep staging in children using raw PPG. The findings underscore the value of transfer learning from the adults to children domain. However, the reduced performance in children under 5 suggests the need for further research and additional datasets covering a broader pediatric age range to fully address generalization limitations.

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来源期刊
IEEE Transactions on Biomedical Engineering
IEEE Transactions on Biomedical Engineering 工程技术-工程:生物医学
CiteScore
9.40
自引率
4.30%
发文量
880
审稿时长
2.5 months
期刊介绍: IEEE Transactions on Biomedical Engineering contains basic and applied papers dealing with biomedical engineering. Papers range from engineering development in methods and techniques with biomedical applications to experimental and clinical investigations with engineering contributions.
期刊最新文献
Table of Contents Front Cover IEEE Transactions on Biomedical Engineering Handling Editors Information IEEE Engineering in Medicine and Biology Society Information IEEE Transactions on Biomedical Engineering Information for Authors
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