从酸性土壤中分离出两个嗜酸性氨氧化古菌--Nitrosotalea devaniterrae gen.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-09-01 DOI:10.1099/ijsem.0.006387
Laura E Lehtovirta-Morley, Chaorong Ge, Jenna Ross, Huaiying Yao, Christina Hazard, Cécile Gubry-Rangin, James I Prosser, Graeme W Nicol
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引用次数: 0

摘要

从 pH 值为 4.5 的英国耕地沙壤土和 pH 值为 4.7 的中国酸性硫酸盐水稻土中分离出两株嗜酸、嗜中和需氧的土壤氨氧化古菌,并分别命名为 Nd1T 和 Nd2T 菌株。两株菌株的 16S rRNA 基因序列相同度超过 99%,基因组长度均小于 2 Mb,平均核苷酸相同度为 79%,平均氨基酸相同度为 81%,DNA G+C 含量约为 37 mol%。两株菌株都是化学石营养体,能固定二氧化碳,并通过将氨氧化成亚硝酸盐获得能量,没有混养生长的迹象。两株菌株都不能利用尿素作为氨的来源。两株菌株在培养过程中都不运动,但 Nd1T 确实具有编码鞭毛成分的基因,因此在某些条件下可能会运动。Nd1T 的细胞是长 0.5-1 µm 的小角棒,在 pH 值为 4.2-5.6 和 20-30 °C 的条件下生长。Nd1T 的细胞是长度为 0.5-1 µm 的角状小杆菌,在 pH 值为 4.0-6.1 和 20-42 °C 的条件下生长。Nd1T 和 Nd2T 在基因组和生理特征方面均与众不同,被指定为新种 Nitrosotalea devaniterrae sp.此外,还正式提出了 Nitrosotaleaceae fam.
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Nitrosotalea devaniterrae gen. nov., sp. nov. and Nitrosotalea sinensis sp. nov., two acidophilic ammonia oxidising archaea isolated from acidic soil, and proposal of the new order Nitrosotaleales ord. nov. within the class Nitrososphaeria of the phylum Nitrososphaerota.

Two obligately acidophilic, mesophilic and aerobic soil ammonia-oxidising archaea were isolated from a pH 4.5 arable sandy loam (UK) and pH 4.7 acidic sulphate paddy soil (PR China) and designated strains Nd1T and Nd2T, respectively. The strains shared more than 99 % 16S rRNA gene sequence identity and their genomes were both less than 2 Mb in length, sharing 79 % average nucleotide identity, 81 % average amino acid identity and a DNA G+C content of approximately 37 mol%. Both strains were chemolithotrophs that fixed carbon dioxide and gained energy by oxidising ammonia to nitrite, with no evidence of mixotrophic growth. Neither strain was capable of using urea as a source of ammonia. Both strains were non-motile in culture, although Nd1T does possess genes encoding flagella components and therefore may be motile under certain conditions. Cells of Nd1T were small angular rods 0.5-1 µm in length and grew at pH 4.2-5.6 and at 20-30 °C. Cells of Nd1T were small angular rods 0.5-1 µm in length and grew at pH 4.0-6.1 and at 20-42 °C. Nd1T and Nd2T are distinct with respect to genomic and physiological features and are assigned as the type strains for the species Nitrosotalea devaniterrae sp. nov. (type strain, Nd1T=NCIMB 15248T=DSM 110862T) and Nitrosotalea sinensis sp. nov. (type strain, Nd2T=NCIMB 15249T=DSM 110863T), respectively, within the genus Nitrosotalea gen. nov. The family Nitrosotaleaceae fam. nov. and order Nitrosotaleales ord. nov. are also proposed officially.

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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