使用基于 XGBoost 和 SHAP 的可解释预测模型更新全球腹泻疾病发病率:系统分析。

IF 4.8 2区 医学 Q1 NUTRITION & DIETETICS Nutrients Pub Date : 2024-09-23 DOI:10.3390/nu16183217
Dan Liang, Li Wang, Shuang Liu, Shanglin Li, Xing Zhou, Yun Xiao, Panpan Zhong, Yanxi Chen, Changyi Wang, Shan Xu, Juan Su, Zhen Luo, Changwen Ke, Yingsi Lai
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引用次数: 0

摘要

背景:腹泻疾病仍然是一个重大的公共卫生问题,尤其影响幼儿和老年人。尽管人们努力控制和预防这些疾病,但其发病率仍然是全球关注的问题。了解腹泻发病率的趋势以及影响这些趋势的因素对于制定有效的公共卫生策略至关重要:本研究旨在探讨 1990 年至 2019 年期间腹泻发病率的时间趋势和相关因素,并预测 2020-2040 年期间全球、地区和国家层面的发病率。我们旨在找出影响这些趋势的关键因素,为未来的预防和控制策略提供依据:方法:根据人口、气象、水卫生、环境卫生和个人卫生等指标,使用极端梯度提升(XGBoost)模型预测 2020-2040 年的发病率。为解释模型中的变量对发病率的影响,采用了 SHapley Additive exPlanations (SHAP) 值。计算了估计年度百分比变化(EAPC),以评估 1990 年至 2019 年和 2020 年至 2040 年年龄标准化发病率(ASIRs)的时间趋势:结果:2010 年至 2019 年期间,全球腹泻发病率和年龄标准化发病率均有所上升。预计 2020 年至 2040 年的发病病例数将上升,而 ASIRs 和发病率将略有下降。在观察期(1990-2019 年)和预测期(2020-2040 年),60 岁及以上的成年人随着年龄的增长,发病率呈上升趋势,而小于 5 岁的儿童发病率一直最高。我们采用了 SHAP 框架来解释模型预测结果。我们发现了一些与腹泻发病率增加相关的风险因素,包括年龄超过 60 岁、年降水量超过 3000 毫米、气温最高值和最低值均超过 20 °C,以及蒸汽压力不足超过 1500 Pa。相对湿度超过 60%、风速超过 4 米/秒、使用安全管理饮用水服务的人口比例超过 80%、使用安全管理卫生服务的人口比例超过 40%,则发病率会降低:腹泻疾病仍然是严重的公共卫生问题,尽管全球的 ASIRs 有所下降,但预计发病病例还会增加。5 岁以下儿童仍然是腹泻病的高发人群,但 60 岁以上老年人的发病率仍然值得额外关注。此外,更有针对性地努力改善安全饮用水和卫生服务的获取,对于降低全球腹泻病发病率至关重要。
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Global Incidence of Diarrheal Diseases-An Update Using an Interpretable Predictive Model Based on XGBoost and SHAP: A Systematic Analysis.

Background: Diarrheal disease remains a significant public health issue, particularly affecting young children and older adults. Despite efforts to control and prevent these diseases, their incidence continues to be a global concern. Understanding the trends in diarrhea incidence and the factors influencing these trends is crucial for developing effective public health strategies.

Objective: This study aimed to explore the temporal trends in diarrhea incidence and associated factors from 1990 to 2019 and to project the incidence for the period 2020-2040 at global, regional, and national levels. We aimed to identify key factors influencing these trends to inform future prevention and control strategies.

Methods: The eXtreme Gradient Boosting (XGBoost) model was used to predict the incidence from 2020 to 2040 based on demographic, meteorological, water sanitation, and sanitation and hygiene indicators. SHapley Additive exPlanations (SHAP) value was performed to explain the impact of variables in the model on the incidence. Estimated annual percentage change (EAPC) was calculated to assess the temporal trends of age-standardized incidence rates (ASIRs) from 1990 to 2019 and from 2020 to 2040.

Results: Globally, both incident cases and ASIRs of diarrhea increased between 2010 and 2019. The incident cases are expected to rise from 2020 to 2040, while the ASIRs and incidence rates are predicted to slightly decrease. During the observed (1990-2019) and predicted (2020-2040) periods, adults aged 60 years and above exhibited an upward trend in incidence rate as age increased, while children aged < 5 years consistently had the highest incident cases. The SHAP framework was applied to explain the model predictions. We identified several risk factors associated with an increased incidence of diarrhea, including age over 60 years, yearly precipitation exceeding 3000 mm, temperature above 20 °C for both maximum and minimum values, and vapor pressure deficit over 1500 Pa. A decreased incidence rate was associated with relative humidity over 60%, wind speed over 4 m/s, and populations with above 80% using safely managed drinking water services and over 40% using safely managed sanitation services.

Conclusions: Diarrheal diseases are still serious public health concerns, with predicted increases in the incident cases despite decreasing ASIRs globally. Children aged < 5 years remain highly susceptible to diarrheal diseases, yet the incidence rate in the older adults aged 60 plus years still warrants additional attention. Additionally, more targeted efforts to improve access to safe drinking water and sanitation services are crucial for reducing the incidence of diarrheal diseases globally.

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来源期刊
Nutrients
Nutrients NUTRITION & DIETETICS-
CiteScore
9.20
自引率
15.30%
发文量
4599
审稿时长
16.74 days
期刊介绍: Nutrients (ISSN 2072-6643) is an international, peer-reviewed open access advanced forum for studies related to Human Nutrition. It publishes reviews, regular research papers and short communications. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced.
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