{"title":"整合动态模型和神经网络,发现气象因素对伊蚊种群的影响机制。","authors":"Mengze Zhang, Xia Wang, Sanyi Tang","doi":"10.1371/journal.pcbi.1012499","DOIUrl":null,"url":null,"abstract":"<p><p>Aedes mosquitoes, known as vectors of mosquito-borne diseases, pose significant risks to public health and safety. Modeling the population dynamics of Aedes mosquitoes requires comprehensive approaches due to the complex interplay between biological mechanisms and environmental factors. This study developed a model that couples differential equations with a neural network to simulate the dynamics of mosquito population, and explore the relationships between oviposition rate, temperature, and precipitation. Data from nine cities in Guangdong Province spanning four years were used for model training and parameter estimation, while data from the remaining three cities were reserved for model validation. The trained model successfully simulated the mosquito population dynamics across all twelve cities using the same set of parameters. Correlation coefficients between simulated results and observed data exceeded 0.7 across all cities, with some cities surpassing 0.85, demonstrating high model performance. The coupled neural network in the model effectively revealed the relationships among oviposition rate, temperature, and precipitation, aligning with biological patterns. Furthermore, symbolic regression was used to identify the optimal functional expression for these relationships. By integrating the traditional dynamic model with machine learning, our model can adhere to specific biological mechanisms while extracting patterns from data, thus enhancing its interpretability in biology. Our approach provides both accurate modeling and an avenue for uncovering potential unknown biological mechanisms. Our conclusions can provide valuable insights into designing strategies for controlling mosquito-borne diseases and developing related prediction and early warning systems.</p>","PeriodicalId":20241,"journal":{"name":"PLoS Computational Biology","volume":null,"pages":null},"PeriodicalIF":3.8000,"publicationDate":"2024-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11463784/pdf/","citationCount":"0","resultStr":"{\"title\":\"Integrating dynamic models and neural networks to discover the mechanism of meteorological factors on Aedes population.\",\"authors\":\"Mengze Zhang, Xia Wang, Sanyi Tang\",\"doi\":\"10.1371/journal.pcbi.1012499\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Aedes mosquitoes, known as vectors of mosquito-borne diseases, pose significant risks to public health and safety. Modeling the population dynamics of Aedes mosquitoes requires comprehensive approaches due to the complex interplay between biological mechanisms and environmental factors. This study developed a model that couples differential equations with a neural network to simulate the dynamics of mosquito population, and explore the relationships between oviposition rate, temperature, and precipitation. Data from nine cities in Guangdong Province spanning four years were used for model training and parameter estimation, while data from the remaining three cities were reserved for model validation. The trained model successfully simulated the mosquito population dynamics across all twelve cities using the same set of parameters. Correlation coefficients between simulated results and observed data exceeded 0.7 across all cities, with some cities surpassing 0.85, demonstrating high model performance. The coupled neural network in the model effectively revealed the relationships among oviposition rate, temperature, and precipitation, aligning with biological patterns. Furthermore, symbolic regression was used to identify the optimal functional expression for these relationships. By integrating the traditional dynamic model with machine learning, our model can adhere to specific biological mechanisms while extracting patterns from data, thus enhancing its interpretability in biology. Our approach provides both accurate modeling and an avenue for uncovering potential unknown biological mechanisms. Our conclusions can provide valuable insights into designing strategies for controlling mosquito-borne diseases and developing related prediction and early warning systems.</p>\",\"PeriodicalId\":20241,\"journal\":{\"name\":\"PLoS Computational Biology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.8000,\"publicationDate\":\"2024-09-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11463784/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"PLoS Computational Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1371/journal.pcbi.1012499\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/9/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"PLoS Computational Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1371/journal.pcbi.1012499","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/9/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Integrating dynamic models and neural networks to discover the mechanism of meteorological factors on Aedes population.
Aedes mosquitoes, known as vectors of mosquito-borne diseases, pose significant risks to public health and safety. Modeling the population dynamics of Aedes mosquitoes requires comprehensive approaches due to the complex interplay between biological mechanisms and environmental factors. This study developed a model that couples differential equations with a neural network to simulate the dynamics of mosquito population, and explore the relationships between oviposition rate, temperature, and precipitation. Data from nine cities in Guangdong Province spanning four years were used for model training and parameter estimation, while data from the remaining three cities were reserved for model validation. The trained model successfully simulated the mosquito population dynamics across all twelve cities using the same set of parameters. Correlation coefficients between simulated results and observed data exceeded 0.7 across all cities, with some cities surpassing 0.85, demonstrating high model performance. The coupled neural network in the model effectively revealed the relationships among oviposition rate, temperature, and precipitation, aligning with biological patterns. Furthermore, symbolic regression was used to identify the optimal functional expression for these relationships. By integrating the traditional dynamic model with machine learning, our model can adhere to specific biological mechanisms while extracting patterns from data, thus enhancing its interpretability in biology. Our approach provides both accurate modeling and an avenue for uncovering potential unknown biological mechanisms. Our conclusions can provide valuable insights into designing strategies for controlling mosquito-borne diseases and developing related prediction and early warning systems.
期刊介绍:
PLOS Computational Biology features works of exceptional significance that further our understanding of living systems at all scales—from molecules and cells, to patient populations and ecosystems—through the application of computational methods. Readers include life and computational scientists, who can take the important findings presented here to the next level of discovery.
Research articles must be declared as belonging to a relevant section. More information about the sections can be found in the submission guidelines.
Research articles should model aspects of biological systems, demonstrate both methodological and scientific novelty, and provide profound new biological insights.
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