使用化学计量学方法对作为诊断样本的唾液进行衰减全反射-傅立叶变换红外光谱分析,以快速对口腔鳞状细胞癌进行分类。

IF 1.8 4区 医学 Q3 ONCOLOGY Cancer Investigation Pub Date : 2024-11-01 Epub Date: 2024-10-01 DOI:10.1080/07357907.2024.2403086
Mohammad Mahdi Khanmohammadi Khorrami, Nozhan Azimi, Maryam Koopaie, Mahsa Mohammadi, Soheila Manifar, Mohammadreza Khanmohammadi Khorrami
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引用次数: 0

摘要

背景与目的:分析技术的最新进展凸显了衰减全反射-傅立叶变换红外光谱(ATR-FTIR)作为一种快速、经济、无创、高效的癌症诊断工具的潜力。本研究旨在评估 ATR-FTIR 光谱与有监督的机器学习分类模型相结合对使用唾液样本诊断 OSCC 的有效性:收集了 80 份 OSCC 患者和健康对照者的非刺激性唾液样本。进行 ATR-FTIR 光谱分析,并利用光谱数据对健康组和 OSCC 组进行分类。数据分析采用了机器学习分类方法,如偏最小二乘法-判别分析(PLS-DA)和支持向量机分类(SVM-C)。通过计算灵敏度、特异性、精确度和准确度来评估模型的分类性能:结果:根据光谱数据将样本分为两类。结果表明,PLS-DA 和 SVM-C 模型的预测集准确度很高,准确度值分别为 0.960 和 0.962。PLS-DA和SVM-C模型的OSCC组灵敏度值分别为1.00:研究表明,ATR-傅立叶变换红外光谱法与化学计量学相结合,是一种利用唾液样本对 OSCC 进行无创诊断的潜在方法。该方法的准确率很高,研究结果表明,ATR-FTIR 光谱法可进一步应用于 OSCC 的临床诊断。
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Attenuated Total Reflection-Fourier Transform Infrared (ATR-FTIR) Spectroscopy Analysis of Saliva as a Diagnostic Specimen for Rapid Classification of Oral Squamous Cell Carcinoma Using Chemometrics Methods.

Background & aim: Recent advancements in analytical techniques have highlighted the potential of Attenuated Total Reflection-Fourier Transform Infrared (ATR-FTIR) spectroscopy as a quick, cost-effective, non-invasive, and efficient tool for cancer diagnosis. This study aims to evaluate the effectiveness of ATR-FTIR spectroscopy in combination with supervised machine learning classification models for diagnosing OSCC using saliva samples.

Methods & materials: Eighty unstimulated whole saliva samples from OSCC patients and healthy controls were collected. The ATR-FTIR spectroscopy was performed and spectral data were used to classify healthy and OSCC groups. The data were analyzed using machine learning classification methods such as Partial Least Squares-Discriminant Analysis (PLS-DA) and Support Vector Machine Classification (SVM-C). The classification performance of the models was evaluated by computing sensitivity, specificity, precision, and accuracy.

Results: The samples were classified into two classes based on their spectral data. The obtained results demonstrate a high level of accuracy in the prediction sets of the PLS-DA and SVM-C models, with accuracy values of 0.960 and 0.962, respectively. The OSCC group sensitivity values for both PLS-DA and SVM-C models was 1.00, respectively.

Conclusion: The study indicates that ATR-FTIR spectroscopy, combined with chemometrics, is a potential method for the non-invasive diagnosis of OSCC using saliva samples. This method achieved high accuracy and the findings of this study suggest that ATR-FTIR spectroscopy could be further developed for clinical applications in OSCC diagnosis.

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来源期刊
Cancer Investigation
Cancer Investigation 医学-肿瘤学
CiteScore
3.80
自引率
4.20%
发文量
71
审稿时长
8.5 months
期刊介绍: Cancer Investigation is one of the most highly regarded and recognized journals in the field of basic and clinical oncology. It is designed to give physicians a comprehensive resource on the current state of progress in the cancer field as well as a broad background of reliable information necessary for effective decision making. In addition to presenting original papers of fundamental significance, it also publishes reviews, essays, specialized presentations of controversies, considerations of new technologies and their applications to specific laboratory problems, discussions of public issues, miniseries on major topics, new and experimental drugs and therapies, and an innovative letters to the editor section. One of the unique features of the journal is its departmentalized editorial sections reporting on more than 30 subject categories covering the broad spectrum of specialized areas that together comprise the field of oncology. Edited by leading physicians and research scientists, these sections make Cancer Investigation the prime resource for clinicians seeking to make sense of the sometimes-overwhelming amount of information available throughout the field. In addition to its peer-reviewed clinical research, the journal also features translational studies that bridge the gap between the laboratory and the clinic.
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