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Weather-Related Factors and Patient-Reported Outcomes (PROs) in Cancer Patients: Results from the ExPRO Study.
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2025-01-11 DOI: 10.1080/07357907.2024.2447859
Hanna Salm, Martin Eichler, Jeanette Bahr, Dimosthenis Andreou, Christian Schmidt, Sarah Uhlig, Daniel Pink

Objective: The ExPRO (External factors influencing patient reported outcomes of patients with malignant diseases) study explored associations between QoL data and environmental factors on the day of questionnaire completion: mean temperature, sunshine hours, season, and lunar phase.

Methods: We undertook a cross-sectional analysis of baseline data in the prospective cohort study at two cancer centers in eastern Germany. From December 2020 to December 2021, cancer patients completed the EORTC QLQ-C30 questionnaire upon admission. Statistical analysis was performed to explore associations between QoL data and environmental factors, including temperature, sunshine hours, season, and lunar phases.

Results: We received 5040 responses (54% male). QoL scores were highest at 25-30 °C and lowest at 5-10 °C (mean 61.3 vs. 52.6, p <0.001). Insomnia was highest at ≤0 °C and lowest at 25-30 °C (mean 39.3 vs. 29.5, p <0.001). QoL was highest with 8 hours of sunshine and lowest with 0 hours (mean 56.9 vs. 50.9, p = 0.003).

Conclusion: Higher temperatures, more sunshine, and summer seasons are associated with higher QoL in cancer patients, while lower temperatures and reduced sunlight are associated with poorer QoL. These findings highlight the need to consider environmental factors in PRO assessments.

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引用次数: 0
A Comprehensive Insight into Apoptosis: Molecular Mechanisms, Signaling Pathways, and Modulating Therapeutics.
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2025-01-06 DOI: 10.1080/07357907.2024.2445528
Mehrdad Mosadegh, Narjes Noori Goodarzi, Yousef Erfani

Apoptosis, or programmed cell death, is a fundamental biological process essential for maintaining tissue homeostasis. Dysregulation of apoptosis is implicated in a variety of diseases, including cancer, neurodegenerative disorders, and autoimmune conditions. This review provides an in-depth insight into the molecular mechanisms and signaling pathways that regulate apoptosis, highlighting both intrinsic and extrinsic pathways. Additionally, the review explains the tumor microenvironment's influence on apoptosis and its implications for cancer therapy resistance. Understanding the complex interplay between apoptotic signaling and cellular responses is crucial for developing targeted therapies that can effectively manage diseases associated with apoptosis dysregulation. The effects of conventional therapeutics and alternative substances with natural sources such as herbal compounds, alongside vitamins, minerals, and trace elements on cellular homeostasis and disease pathogenesis have been thoroughly investigated. Moreover, recent advances in therapeutic strategies aimed at modulating apoptosis are discussed, with a focus on novel interventions such as nutrition bio shield dietary supplement. These emerging approaches offer potential benefits beyond conventional treatments by selectively targeting apoptotic pathways to inhibit cancer progression and metastasis. By integrating insights from recent studies, this review aims to enhance our understanding of apoptosis and guide future research in developing innovative therapeutic approaches.

{"title":"A Comprehensive Insight into Apoptosis: Molecular Mechanisms, Signaling Pathways, and Modulating Therapeutics.","authors":"Mehrdad Mosadegh, Narjes Noori Goodarzi, Yousef Erfani","doi":"10.1080/07357907.2024.2445528","DOIUrl":"https://doi.org/10.1080/07357907.2024.2445528","url":null,"abstract":"<p><p>Apoptosis, or programmed cell death, is a fundamental biological process essential for maintaining tissue homeostasis. Dysregulation of apoptosis is implicated in a variety of diseases, including cancer, neurodegenerative disorders, and autoimmune conditions. This review provides an in-depth insight into the molecular mechanisms and signaling pathways that regulate apoptosis, highlighting both intrinsic and extrinsic pathways. Additionally, the review explains the tumor microenvironment's influence on apoptosis and its implications for cancer therapy resistance. Understanding the complex interplay between apoptotic signaling and cellular responses is crucial for developing targeted therapies that can effectively manage diseases associated with apoptosis dysregulation. The effects of conventional therapeutics and alternative substances with natural sources such as herbal compounds, alongside vitamins, minerals, and trace elements on cellular homeostasis and disease pathogenesis have been thoroughly investigated. Moreover, recent advances in therapeutic strategies aimed at modulating apoptosis are discussed, with a focus on novel interventions such as nutrition bio shield dietary supplement. These emerging approaches offer potential benefits beyond conventional treatments by selectively targeting apoptotic pathways to inhibit cancer progression and metastasis. By integrating insights from recent studies, this review aims to enhance our understanding of apoptosis and guide future research in developing innovative therapeutic approaches.</p>","PeriodicalId":9463,"journal":{"name":"Cancer Investigation","volume":" ","pages":"1-26"},"PeriodicalIF":1.8,"publicationDate":"2025-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142930549","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Pittsburgh Sleep Quality Index (PSQI) Applied to Cancer Patients: Psychometric Properties and Factors Affecting Sleep Quality.
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2025-01-03 DOI: 10.1080/07357907.2024.2446941
Andreas Hinz, Michael Friedrich, Thomas Schulte, Katja Petrowski, Ana N Tibubos, Tim J Hartung

Objective: Cancer patients frequently report sleep problems. The Pittsburgh Sleep Quality Index (PSQI) is a 19-item instrument for assessing sleep problems. The main objective of this study was to analyze the usefulness of the PSQI in oncological research.

Methods: A sample of 1,733 cancer patients with mixed diagnoses were included. In addition to the PSQI, the following questionnaires were adopted: the Insomnia Severity Index (ISI), the Jenkins Sleep Scale (JSS) and the sleep scale of the EORTC QLQ-SURV100.

Results: The internal consistency of the PSQI was α = 0.79. Of the PSQI subscales, the subjective sleep quality correlated most strongly with the other sleep instruments (r between 0.68 and 0.77). In total, 69.2% of the sample were poor sleepers; the effect size of the difference between the PSQI total scores of the patients and a general population sample was d = 0.83. Female patients experienced more sleep problems than male patients (d = -0.49), and younger patients (<60 years) reported more sleep problems than older patients (≥60 years) (d = 0.21).

Conclusions: The PSQI can be recommended for use in clinical practice since its sub-dimensions provide detailed information on the sleep situation of cancer patients.

{"title":"The Pittsburgh Sleep Quality Index (PSQI) Applied to Cancer Patients: Psychometric Properties and Factors Affecting Sleep Quality.","authors":"Andreas Hinz, Michael Friedrich, Thomas Schulte, Katja Petrowski, Ana N Tibubos, Tim J Hartung","doi":"10.1080/07357907.2024.2446941","DOIUrl":"https://doi.org/10.1080/07357907.2024.2446941","url":null,"abstract":"<p><strong>Objective: </strong>Cancer patients frequently report sleep problems. The Pittsburgh Sleep Quality Index (PSQI) is a 19-item instrument for assessing sleep problems. The main objective of this study was to analyze the usefulness of the PSQI in oncological research.</p><p><strong>Methods: </strong>A sample of 1,733 cancer patients with mixed diagnoses were included. In addition to the PSQI, the following questionnaires were adopted: the Insomnia Severity Index (ISI), the Jenkins Sleep Scale (JSS) and the sleep scale of the EORTC QLQ-SURV100.</p><p><strong>Results: </strong>The internal consistency of the PSQI was α = 0.79. Of the PSQI subscales, the subjective sleep quality correlated most strongly with the other sleep instruments (<i>r</i> between 0.68 and 0.77). In total, 69.2% of the sample were poor sleepers; the effect size of the difference between the PSQI total scores of the patients and a general population sample was <i>d</i> = 0.83. Female patients experienced more sleep problems than male patients (<i>d</i> = -0.49), and younger patients (<60 years) reported more sleep problems than older patients (≥60 years) (<i>d</i> = 0.21).</p><p><strong>Conclusions: </strong>The PSQI can be recommended for use in clinical practice since its sub-dimensions provide detailed information on the sleep situation of cancer patients.</p>","PeriodicalId":9463,"journal":{"name":"Cancer Investigation","volume":" ","pages":"1-11"},"PeriodicalIF":1.8,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142920855","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Chronic Inflammation and Cancer: Key Pathways and Targeted Therapies.
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2024-12-08 DOI: 10.1080/07357907.2024.2437614
Gauri Kapoor, Swati Prakash, Vishakha Jaiswal, Ashok K Singh

Recent research has underscored the pivotal role of chronic inflammation in cancer development. Investigations have elucidated key molecular mechanisms underpinning inflammation-related cancer. Extrinsic pathway, driven by inflammatory conditions and intrinsic pathway, propelled by genetic events, emerged as critical links between inflammation and carcinogenesis. The persistent inflammation exacerbates genomic instability, providing a mechanistic link between inflammation and cancer. Targeting crucial inflammatory pathways such as NFκB, JAK-STAT, MAPK/ERK, PI3K/AKT, Wnt and TGF-β, holds promise for advancing cancer treatment modalities. Hence, understanding the key signalling pathways will highlight the intricate interplay between inflammation and cancer recognizing it as a potential target for interventions.

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引用次数: 0
Prediction of Brain Cancer Occurrence and Risk Assessment of Brain Hemorrhage Using Hybrid Deep Learning Technique.
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2024-12-04 DOI: 10.1080/07357907.2024.2431829
Rajeshwar Prasad, Amit Kumar Saxena, Suman Laha

The prediction of brain cancer occurrence and risk assessment of brain hemorrhage using a hybrid deep learning (DL) technique is a critical area of research in medical imaging analysis. One prominent challenge in this field is the accurate identification and classification of brain tumors and hemorrhages, which can significantly impact patient prognosis and treatment planning. The objectives of the study address the prediction of brain cancer occurrence and the assessment of risk levels associated with both brain cancers due to brain hemorrhage. A diverse dataset of brain MRI and CT scan images. Utilize Unsymmetrical Trimmed Median Filter with Optics Clustering for noise removal while preserving edges and details. The Chan-Vese segmentation process for refined segmentation. Brain cancer detection using Multi-Head Self-Attention Dilated Convolution Neural Network (MH-SA-DCNN) with Efficient Net Model. Brain cancer detection using MH-SA-DCNN with Efficient Net Model. This trains the algorithm to predict cancerous regions in brain images. Further, implement a Graph-Based Deep Neural Network Model (G-DNN) to capture spatial relationships and risk factors from brain images. Cox regression model to estimate cancer risk over time and fine-tune and optimize the model's parameters and features using the Osprey optimization algorithm (OPA).

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引用次数: 0
Viral Hepatitis in Western Patients with Advanced Intrahepatic Cholangiocarcinoma: Retrospective Assessment of Prevalence, Prognostic and Predictive Significance. 西方晚期肝内胆管癌患者中的病毒性肝炎:对患病率、预后和预测意义的回顾性评估。
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2024-11-27 DOI: 10.1080/07357907.2024.2432013
Roberto Filippi, Giovanni Brandi, Andrea Casadei-Gardini, Francesco Leone, Nicola Silvestris, Maria Antonietta Satolli, Francesca Salani, Elisa Sperti, Stefania Eufemia Lutrino, Giuseppe Aprile, Daniele Santini, Mario Scartozzi, Luca Faloppi, Andrea Palloni, Marzia Deserti, Simona Tavolari, Margherita Rimini, Oronzo Brunetti, Rosella Spadi, Depetris Ilaria, Massimo Di Maio

Despite a biologically established causative role of viral hepatitis (VH), i.e. HBV and HCV infections, on intrahepatic cholangiocarcinoma (ICC), only few large Western cohorts exploring the association between VH and ICC development are available. The prognostic significance of VH in ICC is debated, and no data are available regarding a predictive role for standard first-line CT (CT1), consisting of gemcitabine +/- platinoids. VH-positivity definition is often clinically incomplete and inconsistent among studies. Five different VH conditions, based on laboratory and anamnestic data, were investigated in a multicentric retrospective cohort of advanced ICC cases. Depending on the specific VH condition considered, 139-194 of 472 ICC cases could be categorized according to the presence of the mentioned VH conditions. VH prevalence ranged from 9.3 to 25.3%. No VH condition showed an impact on survival, although a non-significant worse outcome was observed for some HBV-related conditions. HCV-related conditions were associated to lower pre-CT1 biomarkers of inflammation, markedly higher disease control, and numerically longer time-to-progression with CT1. No benefit on time-to-progression was demonstrated for the addition of platinoids to gemcitabine in VH-positive patients (HR 0.77, CI95% 0.41-1.45), at least in HBV-related cases. These findings are clinically relevant and deserve further investigation.

尽管病毒性肝炎(VH),即 HBV 和 HCV 感染对肝内胆管癌(ICC)具有生物学上的致病作用,但目前只有少数大型西方队列探讨了 VH 与 ICC 发展之间的关系。VH在ICC中的预后意义尚存争议,目前尚无数据表明VH对吉西他滨+/-铂类药物组成的标准一线CT(CT1)具有预测作用。VH阳性的定义在临床上往往不完整,而且不同研究之间也不一致。在一项晚期ICC病例的多中心回顾性队列中,研究人员根据实验室和病理数据调查了五种不同的VH情况。根据所考虑的特定VH情况,472例ICC病例中有139-194例可根据是否存在上述VH情况进行分类。VH发病率从9.3%到25.3%不等。尽管某些与 HBV 相关的病症会导致患者的预后较差,但没有发现任何 VH 病症会影响患者的存活率。HCV相关病症与CT1前炎症生物标志物较低、疾病控制率明显较高以及CT1的进展时间较长有关。在VH阳性患者中,至少在HBV相关病例中,在吉西他滨基础上加用铂类药物对病情进展时间没有益处(HR 0.77,CI95% 0.41-1.45)。这些发现与临床相关,值得进一步研究。
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引用次数: 0
LDHB Mediates Histone Lactylation to Activate PD-L1 and Promote Ovarian Cancer Immune Escape. LDHB 介导组蛋白乳化,激活 PD-L1 并促进卵巢癌免疫逃逸。
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2024-11-25 DOI: 10.1080/07357907.2024.2430283
Xuemei Hu, Zhenqiang Huang, Lingyun Li

Background: To investigate the effects of LDHB on lactylation of programmed cell death 1 ligand (PD-L1) and immune evasion of ovarian cancer.

Methods: Ovarian cancer cells were transfected with LDHB siRNA and cultured with primed T cells. Cell proliferation and viability were measured by cell counting kit 8 (CCK-8) and colony formation assay. The production of immune factors was detected by enzyme-linked immunosorbent assay (ELISA). The histone lactylation and activity of PD-L1 promoter were measured by chromatin immunoprecipitation (ChIP)-qPCR assay and luciferase reporter gene assay, respectively.

Results: Knockdown of LDHB notably inhibited the growth, glucose uptake, lactate production, and ATP production of ovarian cancer cells. Knockdown of LDHB enhanced the killing effects of T cells, led to increased production of immune activation factors IL-2, TNF-α, and IFN-γ, as well as elevated the levels of granzyme B and perforin. Mechanical study identified that LDHB regulated the H3K18 lactylation (H3K18la) modification on PD-L1 promoter region to promote its expression. Overexpression of PD-L1 abolished the immune activation effects that induced by siLDHB.

Conclusion: The LDHB modulated lactate production and the histone lactylation on PD-L1 promoter, which ultimately regulated its expression and participated in the immune evasion of ovarian cancer cells.

背景:研究LDHB对程序性细胞死亡1配体(PD-L1)乳化和卵巢癌免疫逃避的影响:研究 LDHB 对卵巢癌程序性细胞死亡 1 配体(PD-L1)乳化及免疫逃避的影响:方法:用LDHB siRNA转染卵巢癌细胞并与引物T细胞一起培养。用细胞计数试剂盒 8(CCK-8)和集落形成试验检测细胞的增殖和活力。用酶联免疫吸附试验(ELISA)检测免疫因子的产生。染色质免疫沉淀(ChIP)-qPCR测定和荧光素酶报告基因测定分别检测了组蛋白乳化和PD-L1启动子的活性:结果:LDHB的敲除显著抑制了卵巢癌细胞的生长、葡萄糖摄取、乳酸生成和ATP生成。LDHB的敲除增强了T细胞的杀伤作用,导致免疫激活因子IL-2、TNF-α和IFN-γ的产生增加,并提高了颗粒酶B和穿孔素的水平。机械研究发现,LDHB能调节PD-L1启动子区的H3K18乳化(H3K18la)修饰,从而促进其表达。过量表达PD-L1可消除siLDHB诱导的免疫激活效应:结论:LDHB可调节乳酸的产生和PD-L1启动子上组蛋白的乳化,最终调控PD-L1的表达,参与卵巢癌细胞的免疫逃避。
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引用次数: 0
Transforming Skin Cancer Diagnosis: A Deep Learning Approach with the Ham10000 Dataset. 改变皮肤癌诊断:利用 Ham10000 数据集的深度学习方法。
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2024-11-01 Epub Date: 2024-11-10 DOI: 10.1080/07357907.2024.2422602
Priyeshkumar A T, Shyamala G, Vasanth T, Ponniyin Selvan V

Skin cancer (SC) is one of the three most common cancers worldwide. Melanoma has the deadliest potential to spread to other parts of the body among all SCs. For SC treatments to be effective, early detection is essential. The high degree of similarity between tumor and non-tumors makes SC diagnosis difficult even for experienced doctors. To address this issue, authors have developed a novel Deep Learning (DL) system capable of automatically classifying skin lesions into seven groups: actinic keratosis (AKIEC), melanoma (MEL), benign keratosis (BKL), melanocytic Nevi (NV), basal cell carcinoma (BCC), dermatofibroma (DF), and vascular (VASC) skin lesions. Authors introduced the Multi-Grained Enhanced Deep Cascaded Forest (Mg-EDCF) as a novel DL model. In this model, first, researchers utilized subsampled multigrained scanning (Mg-sc) to acquire micro features. Second, authors employed two types of Random Forest (RF) to create input features. Finally, the Enhanced Deep Cascaded Forest (EDCF) was utilized for classification. The HAM10000 dataset was used for implementing, training, and evaluating the proposed and Transfer Learning (TL) models such as ResNet, AlexNet, and VGG16. During the validation and training stages, the performance of the four networks was evaluated by comparing their accuracy and loss. The proposed method outperformed the competing models with an average accuracy score of 98.19%. Our proposed methodology was validated against existing state-of-the-art algorithms from recent publications, resulting in consistently greater accuracies than those of the classifiers.

皮肤癌(SC)是全球最常见的三大癌症之一。在所有皮肤癌中,黑色素瘤扩散到身体其他部位的可能性最大。要有效治疗皮肤癌,早期发现至关重要。由于肿瘤和非肿瘤之间的高度相似性,即使是经验丰富的医生也很难对 SC 进行诊断。为了解决这个问题,作者开发了一种新型深度学习(DL)系统,能够自动将皮肤病变分为七组:光化性角化病(AKIEC)、黑色素瘤(MEL)、良性角化病(BKL)、黑素细胞痣(NV)、基底细胞癌(BCC)、皮纤维瘤(DF)和血管性病变(VASC)。作者引入了多粒度增强深层级联森林(Mg-EDCF)作为新型 DL 模型。在该模型中,首先,研究人员利用子采样多粒度扫描(Mg-sc)获取微特征。其次,作者采用了两种类型的随机森林(RF)来创建输入特征。最后,利用增强型深度级联森林(EDCF)进行分类。HAM10000 数据集用于实施、训练和评估所提出的模型和迁移学习(TL)模型,如 ResNet、AlexNet 和 VGG16。在验证和训练阶段,通过比较四个网络的准确率和损失来评估其性能。所提出的方法以 98.19% 的平均准确率超过了其他竞争模型。我们提出的方法与最近发表的现有最先进算法进行了验证,结果准确率一直高于分类器。
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引用次数: 0
Attenuated Total Reflection-Fourier Transform Infrared (ATR-FTIR) Spectroscopy Analysis of Saliva as a Diagnostic Specimen for Rapid Classification of Oral Squamous Cell Carcinoma Using Chemometrics Methods. 使用化学计量学方法对作为诊断样本的唾液进行衰减全反射-傅立叶变换红外光谱分析,以快速对口腔鳞状细胞癌进行分类。
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2024-11-01 Epub Date: 2024-10-01 DOI: 10.1080/07357907.2024.2403086
Mohammad Mahdi Khanmohammadi Khorrami, Nozhan Azimi, Maryam Koopaie, Mahsa Mohammadi, Soheila Manifar, Mohammadreza Khanmohammadi Khorrami

Background & aim: Recent advancements in analytical techniques have highlighted the potential of Attenuated Total Reflection-Fourier Transform Infrared (ATR-FTIR) spectroscopy as a quick, cost-effective, non-invasive, and efficient tool for cancer diagnosis. This study aims to evaluate the effectiveness of ATR-FTIR spectroscopy in combination with supervised machine learning classification models for diagnosing OSCC using saliva samples.

Methods & materials: Eighty unstimulated whole saliva samples from OSCC patients and healthy controls were collected. The ATR-FTIR spectroscopy was performed and spectral data were used to classify healthy and OSCC groups. The data were analyzed using machine learning classification methods such as Partial Least Squares-Discriminant Analysis (PLS-DA) and Support Vector Machine Classification (SVM-C). The classification performance of the models was evaluated by computing sensitivity, specificity, precision, and accuracy.

Results: The samples were classified into two classes based on their spectral data. The obtained results demonstrate a high level of accuracy in the prediction sets of the PLS-DA and SVM-C models, with accuracy values of 0.960 and 0.962, respectively. The OSCC group sensitivity values for both PLS-DA and SVM-C models was 1.00, respectively.

Conclusion: The study indicates that ATR-FTIR spectroscopy, combined with chemometrics, is a potential method for the non-invasive diagnosis of OSCC using saliva samples. This method achieved high accuracy and the findings of this study suggest that ATR-FTIR spectroscopy could be further developed for clinical applications in OSCC diagnosis.

背景与目的:分析技术的最新进展凸显了衰减全反射-傅立叶变换红外光谱(ATR-FTIR)作为一种快速、经济、无创、高效的癌症诊断工具的潜力。本研究旨在评估 ATR-FTIR 光谱与有监督的机器学习分类模型相结合对使用唾液样本诊断 OSCC 的有效性:收集了 80 份 OSCC 患者和健康对照者的非刺激性唾液样本。进行 ATR-FTIR 光谱分析,并利用光谱数据对健康组和 OSCC 组进行分类。数据分析采用了机器学习分类方法,如偏最小二乘法-判别分析(PLS-DA)和支持向量机分类(SVM-C)。通过计算灵敏度、特异性、精确度和准确度来评估模型的分类性能:结果:根据光谱数据将样本分为两类。结果表明,PLS-DA 和 SVM-C 模型的预测集准确度很高,准确度值分别为 0.960 和 0.962。PLS-DA和SVM-C模型的OSCC组灵敏度值分别为1.00:研究表明,ATR-傅立叶变换红外光谱法与化学计量学相结合,是一种利用唾液样本对 OSCC 进行无创诊断的潜在方法。该方法的准确率很高,研究结果表明,ATR-FTIR 光谱法可进一步应用于 OSCC 的临床诊断。
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引用次数: 0
Construction and Validation of a Novel T/NK-Cell Prognostic Signature for Pancreatic Cancer Based on Single-Cell RNA Sequencing. 基于单细胞 RNA 测序的新型胰腺癌 T/NK 细胞预后特征的构建与验证
IF 1.8 4区 医学 Q3 ONCOLOGY Pub Date : 2024-11-01 Epub Date: 2024-11-10 DOI: 10.1080/07357907.2024.2424328
Yu Wang, Cong Zhang, Jianlu Zhang, Haoran Huang, Junchao Guo

Background: Evidence with regards to the distinction between primary and metastatic tumors in pancreatic cancer and driving factors for metastases remains limited.

Methods: Single-cell RNA sequencing (scRNA-seq) was conducted on metastatic pancreatic cancer. Bioinformatics analysis on relevant sequencing data was used to construct a risk model to predict patient prognosis. Furthermore, immune infiltration and metabolic differences were assessed. The biological function of key differential genes was evaluated.

Results: Paired primary and metastatic tumor tissues from 3 pancreatic cancer patients were collected and conducted scRNA-seq. Subsequently, the T/NK cell subgroup was the most different cell type between primary tumors and liver metastases and was selected for further analysis. Eventually, 6 specifically expressed genes of T/NK cells (B2M, ZFP36L2, ANXA1, ARL4C, TSPYL2, FYN) were used constructing the prognostic model. The stability of this model was validated by an external cohort. Meanwhile, different immune infiltration abundances occurred between high and low risk groups stratified by the model. The high-risk group had a stronger metabolic capability.

Conclusions: A novel prognostic T/NK-cell signature for pancreatic cancer was constructed based on scRNA-seq data and externally validated. The involved key genes may play a role in multiple metabolic pathways of metastasis and affect the tumor immune microenvironment.

背景:有关胰腺癌原发性和转移性肿瘤的区别以及转移的驱动因素的证据仍然有限:方法:对转移性胰腺癌进行了单细胞RNA测序(scRNA-seq)。方法:对转移性胰腺癌进行了单细胞 RNA 测序(scRNA-seq),并对相关测序数据进行了生物信息学分析,从而构建了预测患者预后的风险模型。此外,还评估了免疫浸润和代谢差异。对关键差异基因的生物功能进行了评估:收集了 3 名胰腺癌患者的配对原发性和转移性肿瘤组织,并进行了 scRNA-seq。随后,T/NK 细胞亚群是原发肿瘤和肝转移瘤之间差异最大的细胞类型,被选中进行进一步分析。最终,6个T/NK细胞特异表达基因(B2M、ZFP36L2、ANXA1、ARL4C、TSPYL2、FYN)被用于构建预后模型。该模型的稳定性通过外部队列进行了验证。同时,根据模型分层的高风险组和低风险组之间出现了不同的免疫浸润丰度。结论:一种新的T/N细胞预后模型可用于预测癌症患者的预后:结论:基于 scRNA-seq 数据构建了一个新的胰腺癌 T/NK 细胞预后特征,并通过了外部验证。结论:基于 scRNA-seq 数据构建了一种新的胰腺癌 T/NK 细胞预后特征,并进行了外部验证,其中涉及的关键基因可能在多种转移代谢途径中发挥作用,并影响肿瘤免疫微环境。
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Cancer Investigation
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