从 [18F]-Florbetaben PET 图像中自动搜索用于心脏淀粉样变性分类的神经架构。

Filippo Bargagna, Donato Zigrino, Lisa Anita De Santi, Dario Genovesi, Michele Scipioni, Brunella Favilli, Giuseppe Vergaro, Michele Emdin, Assuero Giorgetti, Vincenzo Positano, Maria Filomena Santarelli
{"title":"从 [18F]-Florbetaben PET 图像中自动搜索用于心脏淀粉样变性分类的神经架构。","authors":"Filippo Bargagna, Donato Zigrino, Lisa Anita De Santi, Dario Genovesi, Michele Scipioni, Brunella Favilli, Giuseppe Vergaro, Michele Emdin, Assuero Giorgetti, Vincenzo Positano, Maria Filomena Santarelli","doi":"10.1007/s10278-024-01275-8","DOIUrl":null,"url":null,"abstract":"<p><p>Medical image classification using convolutional neural networks (CNNs) is promising but often requires extensive manual tuning for optimal model definition. Neural architecture search (NAS) automates this process, reducing human intervention significantly. This study applies NAS to [18F]-Florbetaben PET cardiac images for classifying cardiac amyloidosis (CA) sub-types (amyloid light chain (AL) and transthyretin amyloid (ATTR)) and controls. Following data preprocessing and augmentation, an evolutionary cell-based NAS approach with a fixed network macro-structure is employed, automatically deriving cells' micro-structure. The algorithm is executed five times, evaluating 100 mutating architectures per run on an augmented dataset of 4048 images (originally 597), totaling 5000 architectures evaluated. The best network (NAS-Net) achieves 76.95% overall accuracy. K-fold analysis yields mean ± SD percentages of sensitivity, specificity, and accuracy on the test dataset: AL subjects (98.7 ± 2.9, 99.3 ± 1.1, 99.7 ± 0.7), ATTR-CA subjects (93.3 ± 7.8, 78.0 ± 2.9, 70.9 ± 3.7), and controls (35.8 ± 14.6, 77.1 ± 2.0, 96.7 ± 4.4). NAS-derived network performance rivals manually determined networks in the literature while using fewer parameters, validating its automatic approach's efficacy.</p>","PeriodicalId":516858,"journal":{"name":"Journal of imaging informatics in medicine","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Automated Neural Architecture Search for Cardiac Amyloidosis Classification from [18F]-Florbetaben PET Images.\",\"authors\":\"Filippo Bargagna, Donato Zigrino, Lisa Anita De Santi, Dario Genovesi, Michele Scipioni, Brunella Favilli, Giuseppe Vergaro, Michele Emdin, Assuero Giorgetti, Vincenzo Positano, Maria Filomena Santarelli\",\"doi\":\"10.1007/s10278-024-01275-8\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Medical image classification using convolutional neural networks (CNNs) is promising but often requires extensive manual tuning for optimal model definition. Neural architecture search (NAS) automates this process, reducing human intervention significantly. This study applies NAS to [18F]-Florbetaben PET cardiac images for classifying cardiac amyloidosis (CA) sub-types (amyloid light chain (AL) and transthyretin amyloid (ATTR)) and controls. Following data preprocessing and augmentation, an evolutionary cell-based NAS approach with a fixed network macro-structure is employed, automatically deriving cells' micro-structure. The algorithm is executed five times, evaluating 100 mutating architectures per run on an augmented dataset of 4048 images (originally 597), totaling 5000 architectures evaluated. The best network (NAS-Net) achieves 76.95% overall accuracy. K-fold analysis yields mean ± SD percentages of sensitivity, specificity, and accuracy on the test dataset: AL subjects (98.7 ± 2.9, 99.3 ± 1.1, 99.7 ± 0.7), ATTR-CA subjects (93.3 ± 7.8, 78.0 ± 2.9, 70.9 ± 3.7), and controls (35.8 ± 14.6, 77.1 ± 2.0, 96.7 ± 4.4). NAS-derived network performance rivals manually determined networks in the literature while using fewer parameters, validating its automatic approach's efficacy.</p>\",\"PeriodicalId\":516858,\"journal\":{\"name\":\"Journal of imaging informatics in medicine\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-10-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of imaging informatics in medicine\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/s10278-024-01275-8\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of imaging informatics in medicine","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/s10278-024-01275-8","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

使用卷积神经网络(CNN)进行医学图像分类很有前景,但往往需要大量的人工调整才能获得最佳模型定义。神经架构搜索(NAS)可将这一过程自动化,大大减少人工干预。本研究将 NAS 应用于 [18F]-Florbetaben PET 心脏图像,以对心脏淀粉样变性(CA)亚型(淀粉样轻链(AL)和转甲状腺素淀粉样(ATTR))和对照组进行分类。在对数据进行预处理和增强后,采用了一种基于细胞的 NAS 进化方法,该方法具有固定的网络宏观结构,可自动推导出细胞的微观结构。该算法被执行了五次,每次运行在由 4048 张图像(最初为 597 张)组成的增强数据集上评估 100 个突变架构,总共评估了 5000 个架构。最佳网络(NAS-Net)的总体准确率达到 76.95%。K-fold 分析得出了测试数据集上灵敏度、特异性和准确度的平均 ± SD 百分比:AL受试者(98.7 ± 2.9、99.3 ± 1.1、99.7 ± 0.7)、ATTR-CA受试者(93.3 ± 7.8、78.0 ± 2.9、70.9 ± 3.7)和对照组(35.8 ± 14.6、77.1 ± 2.0、96.7 ± 4.4)。NAS 导出的网络性能可与文献中人工确定的网络相媲美,同时使用的参数更少,验证了其自动方法的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Automated Neural Architecture Search for Cardiac Amyloidosis Classification from [18F]-Florbetaben PET Images.

Medical image classification using convolutional neural networks (CNNs) is promising but often requires extensive manual tuning for optimal model definition. Neural architecture search (NAS) automates this process, reducing human intervention significantly. This study applies NAS to [18F]-Florbetaben PET cardiac images for classifying cardiac amyloidosis (CA) sub-types (amyloid light chain (AL) and transthyretin amyloid (ATTR)) and controls. Following data preprocessing and augmentation, an evolutionary cell-based NAS approach with a fixed network macro-structure is employed, automatically deriving cells' micro-structure. The algorithm is executed five times, evaluating 100 mutating architectures per run on an augmented dataset of 4048 images (originally 597), totaling 5000 architectures evaluated. The best network (NAS-Net) achieves 76.95% overall accuracy. K-fold analysis yields mean ± SD percentages of sensitivity, specificity, and accuracy on the test dataset: AL subjects (98.7 ± 2.9, 99.3 ± 1.1, 99.7 ± 0.7), ATTR-CA subjects (93.3 ± 7.8, 78.0 ± 2.9, 70.9 ± 3.7), and controls (35.8 ± 14.6, 77.1 ± 2.0, 96.7 ± 4.4). NAS-derived network performance rivals manually determined networks in the literature while using fewer parameters, validating its automatic approach's efficacy.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Dual Energy CT for Deep Learning-Based Segmentation and Volumetric Estimation of Early Ischemic Infarcts. Empowering Women in Imaging Informatics: Confronting Imposter Syndrome, Addressing Microaggressions, and Striving for Work-Life Harmony. Deep Conformal Supervision: Leveraging Intermediate Features for Robust Uncertainty Quantification. Leveraging Ensemble Models and Follow-up Data for Accurate Prediction of mRS Scores from Radiomic Features of DSC-PWI Images. A Lightweight Method for Breast Cancer Detection Using Thermography Images with Optimized CNN Feature and Efficient Classification.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1