从土壤中分离出两个新菌种--Hymenobacter mellowenesis sp.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-10-09 DOI:10.1007/s00203-024-04150-w
Seonjae Kim, Sathiyaraj Srinivasan, Myung Kyum Kim
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引用次数: 0

摘要

从韩国仁济市(37°57'49.1 "N 128°19'53.7 "E)和天安市(36°48'47.1 "N 127°05'22.4 "E)采集的土壤样本中分离出了需氧、无鞭毛、革兰氏染色阴性的菌株 M29T 和 ASUV-10-1T。基于 rRNA 基因序列的系统发生学分析表明,菌株 M29T 和 ASUV-10-1T 在膜杆菌科(噬胞目,噬胞类)中形成一个独特的分支。菌株 M29T 与红宝石海门氏菌 DG7BT 的亲缘关系最密切,16 S rRNA 基因序列相似度为 97.05%。菌株 ASUV-10-1T 与弗里吉德氏海门氏菌 B1789T(96.42%)、全真海门氏菌 BT683T(95.97%)和特里科拉海门氏菌 3F2TT(95.65%)的基因相似度最高。这些菌株的最佳生长条件是 pH 值为 7.0,不含氯化钠,温度为 25 °C。在这些菌株中发现的主要细胞脂肪酸是异-C15:0、前-C15:0 和总特征 3(C16:1ω 7c / C16:1ω 6c)。这两种菌株主要含有 MK-7 作为呼吸醌。M29T 和 ASUV-10-1T 菌株的主要极性脂质是磷脂酰乙醇胺、氨基磷脂和氨基脂。根据生化、化学分类学和系统发生学数据,M29T 和 ASUV-10-1T 显然是海门菌属中的新种。根据生化和化学分类学特征对新种进行了分类。这些物种的分类是按照 Bergey's Manual of Systematic Bacteriology(《Bergey 系统细菌学手册》)中概述的指南和规程进行的。我们按照这些方法确定了生理和生化特征以及化学分类标记,如脂肪酸谱、醌类型和极性脂质组成。我们还比较了碳水化合物利用率和酶活性结果[Bergey 1994]。因此,我们建议将菌株 M29T(= KCTC 102056T = NBRC 116578T)命名为 "Hymenobacter mellowenesis",将菌株 ASUV-10-1T (= KCTC 92969T = NBRC 116575T)命名为 "Hymenobacter aranciens"。
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Isolation and characterization of two new species, Hymenobacter mellowenesis sp. nov. and Hymenobacter aranciens sp. nov., from soil

Strains M29T and ASUV-10-1T, which are aerobic, non-flagellated, and Gram-stain-negative, were isolated from soil samples collected in Inje (37°57’49.1"N 128°19’53.7"E) and Cheonan City (36°48’47.1"N 127°05’22.4"E), South Korea. Phylogenetic analyses based on rRNA gene sequences revealed that strains M29T and ASUV-10-1T form a distinct branch within the family Hymenobacter (order Cytophagales, class Cytophagia). Strain M29T is most closely related to Hymenobacter rubidus DG7BT with a 16 S rRNA gene sequence similarity of 97.05%. Strain ASUV-10-1T shows closest genetic similarity to Hymenobacter frigidus B1789T (96.42%), Hymenobacter jeongseonensis BT683T (95.97%), and Hymenobacter terricola 3F2TT (95.65%). The optimal growth conditions for these strains are pH 7.0, no NaCl, and a temperature of 25 °C. The dominant cellular fatty acids identified in these strains are iso-C15:0, anteiso-C15:0, and Summed Feature 3 (C16:1ω 7c / C16:1ω 6c). Both strains predominantly contain MK-7 as the respiratory quinone. The major polar lipids in strains M29T and ASUV-10-1T are phosphatidylethanolamine, aminophospholipid, and aminolipid. Based on biochemical, chemotaxonomic, and phylogenetic data, it is evident that M29T and ASUV-10-1T represent new species within the genus Hymenobacter. The new species were classified based on biochemical and chemotaxonomic characteristics. The taxonomic classification of these species was conducted following the guidelines and protocols outlined in Bergey’s Manual of Systematic Bacteriology. We followed the methods for determining physiological and biochemical characteristics, as well as chemotaxonomic markers such as fatty acid profiles, quinone types, and polar lipid compositions. We also compared with the results of carbohydrate utilization and enzyme activities results [Bergey 1994]. Therefore, we propose the names Hymenobacter mellowenesis for strain M29T (= KCTC 102056T = NBRC 116578T) and Hymenobacter aranciens for strain ASUV-10-1T (= KCTC 92969T = NBRC 116575T).

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
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2.10%
发文量
464
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