揭示ERD15基因在小麦耐干旱和盐渍化联合胁迫中的作用:QTL和RNA-Seq数据的元分析。

IF 5.4 2区 生物学 Q1 PLANT SCIENCES Physiologia plantarum Pub Date : 2024-09-01 DOI:10.1111/ppl.14570
Roohollah Shamloo-Dashtpagerdi, Mohammad Jafar Tanin, Massume Aliakbari, Dinesh Kumar Saini
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引用次数: 0

摘要

在田间条件下,干旱和盐分胁迫同时存在,严重影响了小麦(Triticum aestivum L.)的产量。了解对这些胁迫的响应和耐受性的分子机制对于开发抗逆性强的小麦品种至关重要。我们的研究采用了元 QTL 和元 RNA-Seq 转录组分析相结合的方法,揭示了小麦基因组对干旱和盐渍化的响应功能图谱。我们发现了 118 个元 QTL(MQTL),它们分布在所有 21 条小麦染色体上,其中有 10 个被指定为最有前途的。此外,我们还发现了 690 个在干旱和盐度胁迫下共有的元差异表达基因(mDEGs)。值得注意的是,我们的研究结果突出表明,位于最有希望的 MQTLs 之一的早期脱水反应 15(ERD15)基因是干旱和盐度胁迫共享基因网络中的一个关键基因。在综合胁迫条件下,ERD15在不同的小麦基因型之间差异表达,显著调节水分关系、光合作用、抗氧化活性和离子平衡。这些发现不仅为研究小麦综合胁迫耐受性的分子遗传机制提供了有价值的见解,而且有望为抗逆小麦品种的开发做出重要贡献。
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Unveiling the role of the ERD15 gene in wheat's tolerance to combined drought and salinity stress: a meta-analysis of QTL and RNA-Seq data.

The coexistence of drought and salinity stresses in field conditions significantly hinders wheat (Triticum aestivum L.) productivity. Understanding the molecular mechanisms governing response and tolerance to these stresses is crucial for developing resilient wheat varieties. Our research, employing a combination of meta-QTL and meta-RNA-Seq transcriptome analyses, has uncovered the genome functional landscape of wheat in response to drought and salinity. We identified 118 meta-QTLs (MQTLs) distributed across all 21 wheat chromosomes, with ten designated as the most promising. Additionally, we found 690 meta-differentially expressed genes (mDEGs) shared between drought and salinity stress. Notably, our findings highlight the Early Responsive to Dehydration 15 (ERD15) gene, located in one of the most promising MQTLs, as a key gene in the shared gene network of drought and salinity stress. ERD15, differentially expressed between contrasting wheat genotypes under combined stress conditions, significantly regulates water relations, photosynthetic activity, antioxidant activity, and ion homeostasis. These findings not only provide valuable insights into the molecular genetic mechanisms underlying combined stress tolerance in wheat but also hold the potential to contribute significantly to the development of stress-resilient wheat varieties.

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来源期刊
Physiologia plantarum
Physiologia plantarum 生物-植物科学
CiteScore
11.00
自引率
3.10%
发文量
224
审稿时长
3.9 months
期刊介绍: Physiologia Plantarum is an international journal committed to publishing the best full-length original research papers that advance our understanding of primary mechanisms of plant development, growth and productivity as well as plant interactions with the biotic and abiotic environment. All organisational levels of experimental plant biology – from molecular and cell biology, biochemistry and biophysics to ecophysiology and global change biology – fall within the scope of the journal. The content is distributed between 5 main subject areas supervised by Subject Editors specialised in the respective domain: (1) biochemistry and metabolism, (2) ecophysiology, stress and adaptation, (3) uptake, transport and assimilation, (4) development, growth and differentiation, (5) photobiology and photosynthesis.
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