{"title":"细菌如何启动 DNA 复制成为焦点。","authors":"Fahad Rashid, James M. Berger","doi":"10.1002/bies.202400151","DOIUrl":null,"url":null,"abstract":"<p>The ability to initiate DNA replication is a critical step in the proliferation of all organisms. In bacteria, this process is mediated by an ATP-dependent replication initiator protein, DnaA, which recognizes and melts replication origin (<i>oriC</i>) elements. Despite decades of biochemical and structural work, a mechanistic understanding of how DnaA recognizes and unwinds <i>oriC</i> has remained enigmatic. A recent study by Pelliciari et al. provides important new structural insights into how DnaA from <i>Bacillus subtilis</i> recognizes and processes its cognate <i>oriC</i>, showing how DnaA uses sequence features encoded in the origin to engage melted DNA. Comparison of the DnaA-<i>oriC</i> structure with archaeal/eukaryl replication origin complexes based on Orc-family proteins reveals a high degree of similarity in origin engagement by initiators from di domains of life, despite fundamental differences in origin melting mechanisms. These findings provide valuable insights into bacterial replication initiation and highlight the intriguing evolutionary history of this fundamental biological process.</p>","PeriodicalId":9264,"journal":{"name":"BioEssays","volume":"47 1","pages":""},"PeriodicalIF":3.2000,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"How bacteria initiate DNA replication comes into focus\",\"authors\":\"Fahad Rashid, James M. Berger\",\"doi\":\"10.1002/bies.202400151\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>The ability to initiate DNA replication is a critical step in the proliferation of all organisms. In bacteria, this process is mediated by an ATP-dependent replication initiator protein, DnaA, which recognizes and melts replication origin (<i>oriC</i>) elements. Despite decades of biochemical and structural work, a mechanistic understanding of how DnaA recognizes and unwinds <i>oriC</i> has remained enigmatic. A recent study by Pelliciari et al. provides important new structural insights into how DnaA from <i>Bacillus subtilis</i> recognizes and processes its cognate <i>oriC</i>, showing how DnaA uses sequence features encoded in the origin to engage melted DNA. Comparison of the DnaA-<i>oriC</i> structure with archaeal/eukaryl replication origin complexes based on Orc-family proteins reveals a high degree of similarity in origin engagement by initiators from di domains of life, despite fundamental differences in origin melting mechanisms. These findings provide valuable insights into bacterial replication initiation and highlight the intriguing evolutionary history of this fundamental biological process.</p>\",\"PeriodicalId\":9264,\"journal\":{\"name\":\"BioEssays\",\"volume\":\"47 1\",\"pages\":\"\"},\"PeriodicalIF\":3.2000,\"publicationDate\":\"2024-10-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"BioEssays\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/bies.202400151\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"BioEssays","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/bies.202400151","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
启动 DNA 复制的能力是所有生物体增殖的关键步骤。在细菌中,这一过程由依赖 ATP 的复制启动蛋白 DnaA 介导,DnaA 可识别并熔化复制起源(oriC)元件。尽管进行了数十年的生物化学和结构研究,但对 DnaA 如何识别和解开 oriC 的机理理解仍然是个谜。Pelliciari 等人最近的一项研究从结构上揭示了枯草芽孢杆菌中的 DnaA 如何识别和处理其同源的 oriC,展示了 DnaA 如何利用起源中编码的序列特征与融化的 DNA 结合。将 DnaA-oriC 结构与基于 Orc 家族蛋白的古细菌/真核复制起源复合体进行比较,发现尽管起源融化机制存在根本差异,但来自不同生命领域的启动子在参与起源方面具有高度相似性。这些发现为细菌的复制启动提供了有价值的见解,并凸显了这一基本生物过程引人入胜的进化史。
How bacteria initiate DNA replication comes into focus
The ability to initiate DNA replication is a critical step in the proliferation of all organisms. In bacteria, this process is mediated by an ATP-dependent replication initiator protein, DnaA, which recognizes and melts replication origin (oriC) elements. Despite decades of biochemical and structural work, a mechanistic understanding of how DnaA recognizes and unwinds oriC has remained enigmatic. A recent study by Pelliciari et al. provides important new structural insights into how DnaA from Bacillus subtilis recognizes and processes its cognate oriC, showing how DnaA uses sequence features encoded in the origin to engage melted DNA. Comparison of the DnaA-oriC structure with archaeal/eukaryl replication origin complexes based on Orc-family proteins reveals a high degree of similarity in origin engagement by initiators from di domains of life, despite fundamental differences in origin melting mechanisms. These findings provide valuable insights into bacterial replication initiation and highlight the intriguing evolutionary history of this fundamental biological process.
期刊介绍:
molecular – cellular – biomedical – physiology – translational research – systems - hypotheses encouraged
BioEssays is a peer-reviewed, review-and-discussion journal. Our aims are to publish novel insights, forward-looking reviews and commentaries in contemporary biology with a molecular, genetic, cellular, or physiological dimension, and serve as a discussion forum for new ideas in these areas. An additional goal is to encourage transdisciplinarity and integrative biology in the context of organismal studies, systems approaches, through to ecosystems, where appropriate.