Samuel J B Robinson, Dafydd M O Elias, Tim Goodall, Andrew T Nottingham, Niall P McNamara, Robert Griffiths, Noreen Majalap, Nicholas J Ostle
{"title":"选择性采伐对婆罗洲热带森林土壤微生物群落和功能的影响。","authors":"Samuel J B Robinson, Dafydd M O Elias, Tim Goodall, Andrew T Nottingham, Niall P McNamara, Robert Griffiths, Noreen Majalap, Nicholas J Ostle","doi":"10.3389/fmicb.2024.1447999","DOIUrl":null,"url":null,"abstract":"<p><p>Rainforests provide vital ecosystem services that are underpinned by plant-soil interactions. The forests of Borneo are globally important reservoirs of biodiversity and carbon, but a significant proportion of the forest that remains after large-scale agricultural conversion has been extensively modified due to timber harvest. We have limited understanding of how selective logging affects ecosystem functions including biogeochemical cycles driven by soil microbes. In this study, we sampled soil from logging gaps and co-located intact lowland dipterocarp rainforest in Borneo. We characterised soil bacterial and fungal communities and physicochemical properties and determined soil functioning in terms of enzyme activity, nutrient supply rates, and microbial heterotrophic respiration. Soil microbial biomass, alpha diversity, and most soil properties and functions were resistant to logging. However, we found logging significantly shifted soil bacterial and fungal community composition, reduced the abundance of ectomycorrhizal fungi, increased the abundance of arbuscular mycorrhizal fungi, and reduced soil inorganic phosphorous concentration and nitrate supply rate, suggesting some downregulation of nutrient cycling. Within gaps, canopy openness was negatively related to ectomycorrhizal abundance and phosphomonoesterase activity and positively related to ammonium supply rate, suggesting control on soil phosphorus and nitrogen cycles via functional shifts in fungal communities. We found some evidence for reduced soil heterotrophic respiration with greater logging disturbance. Overall, our results demonstrate that while many soil microbial community attributes, soil properties, and functions may be resistant to selective logging, logging can significantly impact the composition and abundance of key soil microbial groups linked to the regulation of vital nutrient and carbon cycles in tropical forests.</p>","PeriodicalId":12466,"journal":{"name":"Frontiers in Microbiology","volume":null,"pages":null},"PeriodicalIF":4.0000,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11464443/pdf/","citationCount":"0","resultStr":"{\"title\":\"Selective logging impacts on soil microbial communities and functioning in Bornean tropical forest.\",\"authors\":\"Samuel J B Robinson, Dafydd M O Elias, Tim Goodall, Andrew T Nottingham, Niall P McNamara, Robert Griffiths, Noreen Majalap, Nicholas J Ostle\",\"doi\":\"10.3389/fmicb.2024.1447999\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Rainforests provide vital ecosystem services that are underpinned by plant-soil interactions. The forests of Borneo are globally important reservoirs of biodiversity and carbon, but a significant proportion of the forest that remains after large-scale agricultural conversion has been extensively modified due to timber harvest. We have limited understanding of how selective logging affects ecosystem functions including biogeochemical cycles driven by soil microbes. In this study, we sampled soil from logging gaps and co-located intact lowland dipterocarp rainforest in Borneo. We characterised soil bacterial and fungal communities and physicochemical properties and determined soil functioning in terms of enzyme activity, nutrient supply rates, and microbial heterotrophic respiration. Soil microbial biomass, alpha diversity, and most soil properties and functions were resistant to logging. However, we found logging significantly shifted soil bacterial and fungal community composition, reduced the abundance of ectomycorrhizal fungi, increased the abundance of arbuscular mycorrhizal fungi, and reduced soil inorganic phosphorous concentration and nitrate supply rate, suggesting some downregulation of nutrient cycling. Within gaps, canopy openness was negatively related to ectomycorrhizal abundance and phosphomonoesterase activity and positively related to ammonium supply rate, suggesting control on soil phosphorus and nitrogen cycles via functional shifts in fungal communities. We found some evidence for reduced soil heterotrophic respiration with greater logging disturbance. Overall, our results demonstrate that while many soil microbial community attributes, soil properties, and functions may be resistant to selective logging, logging can significantly impact the composition and abundance of key soil microbial groups linked to the regulation of vital nutrient and carbon cycles in tropical forests.</p>\",\"PeriodicalId\":12466,\"journal\":{\"name\":\"Frontiers in Microbiology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2024-09-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11464443/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Frontiers in Microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3389/fmicb.2024.1447999\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3389/fmicb.2024.1447999","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Selective logging impacts on soil microbial communities and functioning in Bornean tropical forest.
Rainforests provide vital ecosystem services that are underpinned by plant-soil interactions. The forests of Borneo are globally important reservoirs of biodiversity and carbon, but a significant proportion of the forest that remains after large-scale agricultural conversion has been extensively modified due to timber harvest. We have limited understanding of how selective logging affects ecosystem functions including biogeochemical cycles driven by soil microbes. In this study, we sampled soil from logging gaps and co-located intact lowland dipterocarp rainforest in Borneo. We characterised soil bacterial and fungal communities and physicochemical properties and determined soil functioning in terms of enzyme activity, nutrient supply rates, and microbial heterotrophic respiration. Soil microbial biomass, alpha diversity, and most soil properties and functions were resistant to logging. However, we found logging significantly shifted soil bacterial and fungal community composition, reduced the abundance of ectomycorrhizal fungi, increased the abundance of arbuscular mycorrhizal fungi, and reduced soil inorganic phosphorous concentration and nitrate supply rate, suggesting some downregulation of nutrient cycling. Within gaps, canopy openness was negatively related to ectomycorrhizal abundance and phosphomonoesterase activity and positively related to ammonium supply rate, suggesting control on soil phosphorus and nitrogen cycles via functional shifts in fungal communities. We found some evidence for reduced soil heterotrophic respiration with greater logging disturbance. Overall, our results demonstrate that while many soil microbial community attributes, soil properties, and functions may be resistant to selective logging, logging can significantly impact the composition and abundance of key soil microbial groups linked to the regulation of vital nutrient and carbon cycles in tropical forests.
期刊介绍:
Frontiers in Microbiology is a leading journal in its field, publishing rigorously peer-reviewed research across the entire spectrum of microbiology. Field Chief Editor Martin G. Klotz at Washington State University is supported by an outstanding Editorial Board of international researchers. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide.