构建感染蛇瓜的西葫芦花叶病毒全长感染性 cDNA 克隆,并根据 ZTMV 分离物的完整基因组序列进行遗传多样性分析

IF 2.5 4区 医学 Q3 VIROLOGY Archives of Virology Pub Date : 2024-10-10 DOI:10.1007/s00705-024-06152-x
Cuiji Zhou, Mingwei Zheng, Xianfeng Du, Ziqi Cao, Jialin Wu, Junhao Zhu, Chengrong Nie
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引用次数: 0

摘要

西葫芦花叶病毒(Zucchini tigre mosaic virus,ZTMV)是一种正义单链 RNA 病毒,属于 Potyvirus 属。本研究构建了感染蛇瓜(Trichosanthes cucumerina var. anguina L.)的 ZTMV 株系的全长感染性 cDNA 克隆,并证明其可感染蛇瓜、韭菜、西葫芦、脊瓜和苦瓜。ZTMV-FS7(PP291701)的完整基因组序列与ZTMV-TW的核苷酸序列相似度最高(86.2%)。对 12 个 ZTMV 分离物的遗传多样性分析表明,P1 基因的变异性最高。选择压力分析表明,所有 ZTMV 基因都处于负选择状态。然而,一些位点,尤其是 P1 基因内的位点,则处于正选择状态。
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Construction of a full-length infectious cDNA clone of zucchini tigre mosaic virus infecting snake gourd and genetic diversity analysis based on complete genome sequences of ZTMV isolates

Zucchini tigre mosaic virus (ZTMV) is a positive-sense single-stranded RNA virus belonging to the genus Potyvirus. In this study, a full-length infectious cDNA clone of a ZTMV strain infecting snake gourd (Trichosanthes cucumerina var. anguina L.) was constructed and shown to infect snake gourd, chieh-qua, zucchini, ridge gourd, and bitter melon. The complete genome sequence of ZTMV-FS7 (PP291701) showed the highest nucleotide sequence similarity to ZTMV-TW (86.2% identity). Genetic diversity analysis of 12 ZTMV isolates showed that the P1 gene had the highest variability. Selection pressure analysis indicated that all of the ZTMV genes were under negative selection. However, some sites, particularly within the P1 gene, were under positive selection.

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来源期刊
Archives of Virology
Archives of Virology 医学-病毒学
CiteScore
5.10
自引率
7.40%
发文量
324
审稿时长
4.5 months
期刊介绍: Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.
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