根据耳石氧同位素比值和线粒体 DNA 推断日本鲳鱼的季节分布和种群遗传结构

IF 2.6 3区 地球科学 Q1 MARINE & FRESHWATER BIOLOGY Estuarine Coastal and Shelf Science Pub Date : 2024-10-01 DOI:10.1016/j.ecss.2024.108974
Aafaq Nazir , Ting-Hung Lin , Tien-Hsia Kuo , Kotaro Shirai , Pei-Ling Wang , Jen-Chieh Shiao
{"title":"根据耳石氧同位素比值和线粒体 DNA 推断日本鲳鱼的季节分布和种群遗传结构","authors":"Aafaq Nazir ,&nbsp;Ting-Hung Lin ,&nbsp;Tien-Hsia Kuo ,&nbsp;Kotaro Shirai ,&nbsp;Pei-Ling Wang ,&nbsp;Jen-Chieh Shiao","doi":"10.1016/j.ecss.2024.108974","DOIUrl":null,"url":null,"abstract":"<div><div><em>Psenopsis anomala</em> (Japanese butterfish) is a commercially important fish species with a wide distribution in the Northwest Pacific Ocean, but its catch in Taiwanese waters has been declining for decades. This study aims to elucidate the migration pattern and population structure of <em>P</em>. <em>anomala</em> by analyzing otolith δ<sup>18</sup>O values, mitochondrial <em>COI</em> and <em>cyt b</em> sequences, respectively. The results reveal a seasonal migration pattern between the northern South China Sea and the Yellow Sea. Analysis of the haplotype network reveals that most <em>P. anomala</em> collected from each location share the haplotypes Hap1 and Hap5, while each population also has its own unique haplotypes. Analysis of molecular variance reveals that the primary variation (92.98%) is observed among individuals within the populations. Fu's <em>F</em><sub><em>S</em></sub> test conducted for all populations showed no significant differences, and the mismatch distribution aligns with recent population expansion. Both the maximum likelihood tree and the median-joining network show no geographic population structuring in <em>P</em>. <em>anomala</em> samples from Japan and Taiwan. The combined findings from otolith microchemistry and genetic analysis suggests that <em>P</em>. <em>anomala</em> distributed in east Asia shall be managed as a single stock.</div></div>","PeriodicalId":50497,"journal":{"name":"Estuarine Coastal and Shelf Science","volume":"309 ","pages":"Article 108974"},"PeriodicalIF":2.6000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Seasonal distribution and population genetic structure of Psenopsis anomala (Japanese butterfish) inferred from otolith oxygen isotope ratios and mitochondrial DNA\",\"authors\":\"Aafaq Nazir ,&nbsp;Ting-Hung Lin ,&nbsp;Tien-Hsia Kuo ,&nbsp;Kotaro Shirai ,&nbsp;Pei-Ling Wang ,&nbsp;Jen-Chieh Shiao\",\"doi\":\"10.1016/j.ecss.2024.108974\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div><em>Psenopsis anomala</em> (Japanese butterfish) is a commercially important fish species with a wide distribution in the Northwest Pacific Ocean, but its catch in Taiwanese waters has been declining for decades. This study aims to elucidate the migration pattern and population structure of <em>P</em>. <em>anomala</em> by analyzing otolith δ<sup>18</sup>O values, mitochondrial <em>COI</em> and <em>cyt b</em> sequences, respectively. The results reveal a seasonal migration pattern between the northern South China Sea and the Yellow Sea. Analysis of the haplotype network reveals that most <em>P. anomala</em> collected from each location share the haplotypes Hap1 and Hap5, while each population also has its own unique haplotypes. Analysis of molecular variance reveals that the primary variation (92.98%) is observed among individuals within the populations. Fu's <em>F</em><sub><em>S</em></sub> test conducted for all populations showed no significant differences, and the mismatch distribution aligns with recent population expansion. Both the maximum likelihood tree and the median-joining network show no geographic population structuring in <em>P</em>. <em>anomala</em> samples from Japan and Taiwan. The combined findings from otolith microchemistry and genetic analysis suggests that <em>P</em>. <em>anomala</em> distributed in east Asia shall be managed as a single stock.</div></div>\",\"PeriodicalId\":50497,\"journal\":{\"name\":\"Estuarine Coastal and Shelf Science\",\"volume\":\"309 \",\"pages\":\"Article 108974\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2024-10-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Estuarine Coastal and Shelf Science\",\"FirstCategoryId\":\"89\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0272771424003627\",\"RegionNum\":3,\"RegionCategory\":\"地球科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MARINE & FRESHWATER BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Estuarine Coastal and Shelf Science","FirstCategoryId":"89","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0272771424003627","RegionNum":3,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MARINE & FRESHWATER BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

日本蝶鱼(Psenopsis anomala)是一种重要的商业鱼类,广泛分布于西北太平洋,但几十年来在台湾海域的捕获量一直在下降。本研究旨在通过分析耳石δ18O值、线粒体COI和细胞b序列,阐明日本鲳鱼的洄游模式和种群结构。结果显示,南海北部与黄海之间存在季节性洄游模式。对单倍型网络的分析表明,从各地采集到的无尾鲈大多具有相同的单倍型 Hap1 和 Hap5,同时每个种群也有自己独特的单倍型。分子变异分析表明,主要变异(92.98%)发生在种群内的个体之间。对所有种群进行的傅氏 FS 检验显示没有显著差异,错配分布与最近的种群扩张一致。最大似然树和中位连接网络都表明,日本和台湾的无尾熊样本没有地理种群结构。耳石微化学和遗传分析的综合结果表明,分布在东亚的 P. anomala 应作为单一种群进行管理。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Seasonal distribution and population genetic structure of Psenopsis anomala (Japanese butterfish) inferred from otolith oxygen isotope ratios and mitochondrial DNA
Psenopsis anomala (Japanese butterfish) is a commercially important fish species with a wide distribution in the Northwest Pacific Ocean, but its catch in Taiwanese waters has been declining for decades. This study aims to elucidate the migration pattern and population structure of P. anomala by analyzing otolith δ18O values, mitochondrial COI and cyt b sequences, respectively. The results reveal a seasonal migration pattern between the northern South China Sea and the Yellow Sea. Analysis of the haplotype network reveals that most P. anomala collected from each location share the haplotypes Hap1 and Hap5, while each population also has its own unique haplotypes. Analysis of molecular variance reveals that the primary variation (92.98%) is observed among individuals within the populations. Fu's FS test conducted for all populations showed no significant differences, and the mismatch distribution aligns with recent population expansion. Both the maximum likelihood tree and the median-joining network show no geographic population structuring in P. anomala samples from Japan and Taiwan. The combined findings from otolith microchemistry and genetic analysis suggests that P. anomala distributed in east Asia shall be managed as a single stock.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
5.60
自引率
7.10%
发文量
374
审稿时长
9 months
期刊介绍: Estuarine, Coastal and Shelf Science is an international multidisciplinary journal devoted to the analysis of saline water phenomena ranging from the outer edge of the continental shelf to the upper limits of the tidal zone. The journal provides a unique forum, unifying the multidisciplinary approaches to the study of the oceanography of estuaries, coastal zones, and continental shelf seas. It features original research papers, review papers and short communications treating such disciplines as zoology, botany, geology, sedimentology, physical oceanography.
期刊最新文献
Estuarine lateral ecotones shape taxonomic and functional structure of fish assemblages. The case of the Seine Estuary, France Clam diet and production in relation to the spatial pattern of food source inputs and quality: A stable isotope approach Design and development of a low-cost GNSS-tracked surface drifter for investigating tidal currents in a creek environment Editorial Board Comparative study of structural features and parasite–parasite interactions between MCPX, a novel pathogen identified from the Manila clam Ruditapes philippinarum, and Perkinsus olseni
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1